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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25558_c6_seq12
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_protein_on_ecdysone_puffs_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003727 F single-stranded RNA binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005703 C polytene chromosome puff
GO:0005875 C microtubule associated complex
GO:0019233 P sensory perception of pain
GO:0046872 F metal ion binding
GO:0048024 P regulation of mRNA splicing, via spliceosome
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.01 TPM:0.01
ORF Entry
Sequence
(Nucleotide)
AATCATTCCCCTTAATAGCACTTATGCTATGAACGTCTTTGTTCCATTGTATATTATGGT
AACTGTAACCCAAGACATATTTTTATTTGATTAGTTCCAATGTAAGTTATCGTACGTGTA
ACATACCCTACTTAATCCTACACATATATCAACGTAAAGTATAGTAAGTACTACATACAA
CGAAATACCATTGATATTAACCGTAGTAGAAAACCGTATGTGACTTTTAAGAAATTCTAG
CAAAAAATTCAAAAAAACTTTTTGGAAGTAATATTCCTAAGTTTGAAATTGATTGTTAGT
TCGACTCCCTAATGTATGTGTTTATTCGTTCGCGATTCCACATATTTTTTTAATAAAAAA
GCAACATCATTAATTTATTGTAGTTCGTAAAGCACTTTGTTACGTTTTTCTTTTTTTCAT
TTTACAAAATATGAAATCGTAGCACATATAAATTAGCGTGGACAGAAAAGGGTAATTTAA
CAAAATATAAAACTTTTATGTTTGAGCTAACAATCTTCAAAAGGCTTCAAAGGCAAATAC
ATACAATAAGAGAAGAAAAACAAACACTAAATTATGGACATGGCAAACTGAAATTATAAT
TGAAAGATTAGGACACATTAAAAAATCCGTATCGCACTTCACAGTACAGTAATCAGTGGT
TTAAAAACTAGCAACTTTTTTACGCAGCAAAACCTACAAGATTTTGTATCACATTCAATT
CTAAATGGTAATAATTGACATGAAGATACTAAAATGTTACCGTAGATTGGGGGAATCGGG
ACTCTTTCCAAATCCAACTCAAATTTTCAATGGTTTTTCTTAAACTAATAAAATTGAGAT
TAAAATAGTTCCGGAAGTTTAAATTTTCATATACAATGCATTATTATATATAGTTCATTG
CAAAATATACACAAAAATAAAATAAAACTATTGGGCCACATATGGAGACAATAGCTTTTC
GATAGGGCTGGTGAGTACTGGCACTGTTTAGTTGTTTAGGTAGGTACAAACTATTTATCT
GAATAGATCCAAACTTCGCTTGACAGAAATTTCAAATAGTAACAAAGATAATTAAATCGT
TTTTAATACATTTTGTAGCTTTCCAATCCTATTGACAAATGATCGTTTTTTCTTAAATTG
ATAGTGACAAGATGTCTGAGTTTTGCTAGATTATAGAAAAAATATTGCCTTCAATTTAAA
ATTGGACCATTCAGTTCACCACAAAATTAATGCCCACTATGCCTGTAAAGAAAATCTCAG
ATTTGTCTTTATTCTACCCAGAGTCCTTATTCCCTCCAATCTATGGTACTCTTACTTGAA
ATTTTATTGATATTTTCAAGCTGTTTTAGATGGTTCACTATCATTTTAGTTGGTGTAATA
TGCTTAAACAACTTCTAATATAATTTTATGTTATAAATATCAATTGACTGAGATCTAACA
TTCTCAATTCAATCCAAGTGATAAAACGCTAAAAATAAGTAAGTAAAAAAATGATTTTAT
CTAATTACTAATGGAGTAACTTGGATTAATATTATGTAACATAATAACGGAGATAAAATT
GATTTAATTTTACTTGACAGTGGCTGTTTCTTTGTTGGTCGAATTTTAAAGTAAGTAACT
TAAAACAAAGAGTAAAAGTAAAAATCAATTTGATTTCCATTATTACATGCAAAGATACTG
AAATTATAATTATTTAAATATTGAGAATTTTCATACTTAAATAACACATGCAAGGAATAC
ATTATGTCCTGTAACTTACAGCTGTCTTTTTAAGTTAAATCTTTTGAAACTCTCATTCCA
TTTAGTTTAGTAAACTTAAATATTTTAGGAGACAAACAGAAACCTTCACATCACAATATA
AATATTTTGTGTATGTTATTAGATTAGATAGTTGGTGAAACTTCATGAGCGAAAATTTTA
CCACAATACAGTAATGTAAATAAAATGTAATCAAAATAAGAATAGGATTTGCTGATGGAA
CACAATTTGAAAGAGATTTTTTTGTGGATTTCCATAATTCATCAACATAGGATTTCATTT
ATAGATTATTTACAGATATTATTTTGGATAATTAATTTGGTAGAAAGTCAATCCTGTCCT
TATTTCGCTTGCATTGTAAATATTTTTATCCAAAGCAGTAATTTCGGTTGCTTGTAACTA
GCAAGTTCTGGGACAACATACACTTGTTCTAATATCTGCCACGGCCCCTGCCTCTACCGC
GTGCTCTAGCTCTCGGTGAGGGTTTCGGTTTCACATCTGGCACGGGTAGAGTTAATTGAG
GACTTTTTTCTTTTTCTGGGGGCTGTTCAATTACTTCCGCTACTTCAGGCTTCTCTTCTA
CTGGATCCTCGATTTCGGCTGTCGCTTCAGGTTCTATTTTAGGTTTTATATCTGGTTCAC
CAAGTTCTTCTTGGGATTTCTTCTCATCTTCCAGTATTTCATCAACCGACTGCTCCCAAT
CTTCAAGATCATCATTATTTGGAATACCGTCATCAAATTGTTCATCACGGTTTGTGTCTG
TATATTCATTAGCATGTTCATTGTCATTGTCATTATCATTGTCGTTGTCATTATCATTTT
CATAATCTTGTCCTTCATGATCGGAAGATGTCTTGCGTCTCTTCCAGTTACCAGATTGAT
CGTTGCGTTCAGAAGGACGTTTCCCATTTGAATTCTCAGTGGATTGAGTTCCCGCTGGTT
TGTGTCCAGTCTTCTCAGAAAGCATCTTCAGGAAGAAAACGTGATGTCTCCAGGTTCTCA
AGTGCACATCAGCAGTTTCCTGCGAATCGAGGAGTTTCTTGCACAGCTTGCATTGTATGC
AGCGGAACTCAGTCAAGAACGATTGACCAACACCACGTTCCGTACTGTAACTTGGGAACA
TATCCTGAGTGACATAGCTGAGATCATCATCTTCTTTGAAGTCCAGGATGACCTTTTCAT
CATCAACAGGTTTACTATCAGCCTTCTCACTCACATCTTTCATCTCTTGATCTTCATTTT
CAATCTTAGCTTTGTTTTCAGTGTCAGTTTGCTGTTCATCAGTTTTATCATTGTCATCAT
GCTTCTCTTCTTGAACATCATCTCTGCGTGGTCTACGCTGACGACGCTCACACAGGTATG
ACTGCTCCATGCCCAAAGTTGAAATCATCAACATTTCAGGCTTGGGCTTTGAAAGTACAT
CTTGTTTATCCTGAATTGCACGCAAATGTTCAGCAGTGAGACGGTGTTCATCTAATTCAA
TTCTAGTTGGCAACTCCTTGTGGCAAGTATTACAGAAGGGATGTAGGTATTTCTTAAGCT
TCCGGTGTCCAACGGTAGTCCGGTGAGCTGCTCCGTTGGCCGCATACATATCACACATAG
CACAGTAGAAGTCTCTAGCTGGTTGCTGACCAGATTTGCGGGTGCGTTTCATTTCACGAA
TCTTATATTCTTGTCTCATTGTATCAGCAGTAAGAGCATAGCTCTCAACAGTCTTCTGCA
TCATAATGGCATGAGCTCTTCCACTGAGATGATTCTCAAATGAACGTCCATCCCACATGC
TCTTGTGGCAGATGTGACATTTCAGCAGCTTTGAATTAATGTCATCATAGCGCGTTTTAG
GGACATCTTGCTTTTCATCCTCTTCTGGCTCTTTTCTCTCATTTTCAGGTTTGTCAGTCT
CAGTAGTCTTCTCTTCCTGTTCACTGTGAATAACTAAGTTTGTAAATGCATGAAAACATT
CACTATATAATTGTATGTTGTCACTTCTGCACTTATCACACCACAATTTGATTCAGTGAG
TATGATTAGGAGCTAAGCTTTTAATAGATTTTTAATGGGAAGATTTATGA
(3830 bp)

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