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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25531_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_src_substrate_cortactin_isoform_X1_[Papilio_polytes]
Ontology
GO:0001726 C ruffle
GO:0002102 C podosome
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005905 C clathrin-coated pit
GO:0005925 C focal adhesion
GO:0006886 P intracellular protein transport
GO:0006897 P endocytosis
GO:0006898 P receptor-mediated endocytosis
GO:0008076 C voltage-gated potassium channel complex
GO:0016020 C membrane
GO:0030027 C lamellipodium
GO:0030041 P actin filament polymerization
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030516 P regulation of axon extension
GO:0030838 P positive regulation of actin filament polymerization
GO:0030863 C cortical cytoskeleton
GO:0031532 P actin cytoskeleton reorganization
GO:0042995 C cell projection
GO:0043197 C dendritic spine
GO:0048041 P focal adhesion assembly
GO:0048812 P neuron projection morphogenesis
GO:0048870 P cell motility
GO:0097581 P lamellipodium organization
Transcript
Level		FPKM:41.02 TPM:37.98
ORF Entry
Sequence
(Nucleotide)
CATGTTCAAAGATTCCGTTACATATATACGTCTGAAGCTAATAAAAGCGCATTAATAACG
AACATTGCATGATACAATCGAGCGAAGCAGAAATCGACATAGCGAATGTCCCTGCCGCTA
CCGATACACACACTTACCATCAAGTCAGTTTGGAGACGCACATGCTATCTTACAGAATAA
AAGAAATAAACTATAACCTCTCTTCTGCAATACTATATTTCGCACGCGAGCCCACGGGAA
GACTTGTTACATTTATTATTTTATTTAAAAAAATTATTACACTTTCTATGTAATGATCAG
TCACGAATTTATAAGTCTACATACATTAGAACGTCTGAAAATAATAGTACTGTTTGCAAA
AACAATATTGTCGCGTTTTTTTAAGAAACATTATTTAATTAGGCGTCAGATGGCGCGTGA
GTAGTCTCTACTTATATATGTATTACACTGTACACATTAAAAACCAATAAAAGGTCATTT
TCAGTAAATAGCATCGCTTGTCTTATGGTTTAAAATTGATAATTTCAATTTGAATTATAG
AAAAAATATTTAGATCATGTTTCGACGGTACTTTTTGTTCGTCCTATAATTTTCTATATT
TTCATTTATTCAATGTTGATTTTGGAATGTAGTTTTTAAAAAAATTTAATTTCTATTTAT
CTTGTAACTGTACGTAGTTAGCCGGGAACAGACCGTAGGCGCCTTTGCACAATCCCTGCC
ACCAACCCTCGTCGATCATGACGATGTTGGTGATGACGTCATCAGGATCGAAGGATATCT
CGTCGGGCGCGGCGGCCTGGTAGTCGTACAGCGCCCTCGCGGTGTAGCCGTCCTCCTCGT
CGCCGCCCTCGTCCTCCCCCTCCCACCCCACCGGAGACACCACAATGGTGGGCTGGCGGT
TCATCTCTTCTTTCCCCTCCTTCGCTTCTCCCACCAGGGTGACATCGGGCAAGTTCTTTG
TTTCTTCTTTCACATCCTCTTCCCTCGCAATCACCTCTTGTGTTGCATTATTACCAACTG
TGACATTGTCTTCCTCTCTTGCTACCTCTTCTCTTGGGATCTCCTCTTGGACAATCTCTT
TCTTGACTTCTCTTTCTTTGACCTCTGCGGTGTGCGGAGTGGCTCGCAGTACGCTGGGCG
GTGTGTCGTCCGGCGTGGGCTGCAACTCTTCAGGTTCGGGAGACTCAGGTTTGTTGGCTA
CGCGTTCTCTCTCCTTTAGCGAGATGTCCTTGTCGATCTTTTCCCTCTGCTGCCGGATCC
TCTGCACCGACTGCAGCGCCTCCTCTTCTTTTTCCTTGGCCATGTTTTCGAACTTGGCCC
GTATGGACGAGGGCTTCGCCCCGCCGATGTCGGGCTTCGGTCTCGTGTAGTTGGTGCCGA
CCTTGTCCGCGGCCCCGAAGGCGTGCGCCGACTTGTCCACGCGGTCCGACTGCACGCCGA
ACTTACCGCCGAAGCCCTTCTTGTGGTCGAGCTGGCTGGCGTGCGCGGGCGTCTTCTCCT
GGTGGTCCCAGCCGACGGCCGACGCGTCCTGTCGGTCCGTCTGCACGCCGAACTTCCCGC
CGAAGCCGATGGCGTAGTCTTTCTGCGAGTGATGTTGTTGCGCGTCCTCCTTGTGGTCCC
AGCCCAGCGCGGAGGCGTCCTGGCGGTCGGCCTGCACCCCGAACTTGCCCCCGAACCCGA
CCGCGTAGTCTCGCTGCGACGGGTGCTTCTCGACCTGCTCGCGGTGCTCCCAGCCCGCCG
CGCTCTTATCGACCCTGTCGGTTTGGACGCCGAACTTGCCTCCGAAGCCCTGCGCGTAGT
CAGTTTGCGAAACGTGCTTCTCTACTTTGGCTACGTAGTCGTGCCCCACCGCAGACTTGT
CCATGCGGTCCGCTTGGACCCCGAACTTGCCACCAAAACCTTGAGCGTAATCTTTCTGCG
AAACGTGTTTCTCGGTCTTGCCAACATAGTCGTGTCCAACGGCTGATTTATCCATGCGGT
CAGCTTGCACACCGAATTTGCCACCATATCCAAATGAAGGTTTCGGTCCAGCCTCATACT
GTTTCTTCTTGGCTAATTTGTCAGCTTCAAATACCTCTTCACGTAATTTTGCCATGTCAA
TTGCCTCAACATTCCTTCCGGCGGGCCCCCATCTTTGTTCCTGTTCACTCACATCATTAA
CATAGTCGGGATCTGTTTCCCAATCATCTGCTTCAGCAGGCTCTGGCGCCTTCACATTAG
TAGCAGCTTTCCACATCTTATTCCTTTGAACCGGTTGAGGAAAACAAACACGTTTTTAAT
GTTCTATTTTGAACTTTCACTTTTAACGCATAAAAAAGTTATCGACTGGTTAAAATGTCA
CGGATATATTTTAATGGTAAGATTTTTTTTACTCTAAAAAACGTTTTCTCAATTTGTTTT
TACTTTCATATTTTGTATTTGAATAAAATTTTGGGCGATGGTTTTTGTGATGCGTCAGCC
TCTGACAGGTG
(2471 bp)

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