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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25518_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_spectrin_beta_chain,_non-erythrocytic_5_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005938 C cell cortex
GO:0008021 C synaptic vesicle
GO:0008091 C spectrin
GO:0016079 P synaptic vesicle exocytosis
GO:0016081 P synaptic vesicle docking
GO:0016363 C nuclear matrix
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0048471 C perinuclear region of cytoplasm
GO:0051693 P actin filament capping
GO:0071361 P cellular response to ethanol
Transcript
Level		FPKM:17.73 TPM:16.42
ORF Entry
Sequence
(Nucleotide)
GAGTTCCGTCGCGGTAACACGTGTCGCGGCCGCCTTACAAAACTCCCGGGACAGAGCGCA
TCGGATGCGCGCGTGATGTTTCAAAAGTGATTAGTGCCTTCACGAATCTGATATTCGTTA
ATGGTTCTCACAATTACGAACACATCTTGTGTATACAAAAGAAGTTAATAGTGTGTGGAT
TGTCTTCAAATAAAACTTGGAATACCCCTTCAATACTTACAACGTAAAAACAGTTAAAAA
CAAAAAAAAAGTACTACCAACAAAAGGATCAGTGTTAGAAGTGACAGTGACAGTGACAGT
GTCACGAAACGGATGTGACAAAAATGCAGAGACAGTTGAGCAATGTCAGTTTTCATTCTT
ACCAGGACTACCAACCTAGCAGGCGTTATGGGCCGCAGTATGAGCCTGGAGGCTACGCCA
CGGTAGTACAGCAACGTACCAACATGACCCAGAGGGAGGACGCCCTCAAGTTCGAGCAGG
GCCGCATCAAGGCCCTGCAGGAGGAGAGGTTGCACATCCAGAAGAAAACCTTCACGAAAT
GGATAAATTCGTTCCTGCAGAAGGCCCGGATGGAGGTGGAGGATCTATTTGTGGATTTGG
CTGACGGGCGGCGCCTCCTCAAACTCCTGGAGATCATCAGCGGGGAGCGTCTGCCGCGAC
CCAACACCGGCAGGATGAGGGTCCACAAAATCGAAAACGTCAACAAAAGCTTGAGTTTCT
TACACACAAAGGTGCGTTTGGAGTCTATCGGAGCTGAAGACATCGTGGACGGAAACCCTC
GACTCATCCTCGGCTTGATCTGGACCATCATCCTGCGTTTCCAAATCCAGGAGATCGAAA
TCGATGTGGACGAAGAGAACGAGTCTTCCGAGAAGAAATCCGCCAAAGACGCCTTGCTGC
TGTGGTGCCAACGCAAGACGAGTGGCTACCACGGAGTCCACATTCACAATTTCACTGACT
CGTGGAGATCCGGGCTGGGTTTCAACGCGCTCATACATGCTCACAGGCCCGACCTCTTCC
GCTGGACCGAGGTGCCGGTCGCTGACCACGTGGAAACCCTCAACCACGCCTTCGACGTCG
CCCACAAGCACCTCGGCATCCCCAAACTCCTGGACGCTGAAGATGTGGACACGACCAGGC
CTGATGAGAAATCGGTGATGACGTACGTGGCGAGCTATTATCACACGTTCGCTCGTATGA
AGAATGAACAGAAGAGTGGTAGGAGAATTGCTAATATCATCGGTCAAATGATGGACTGTG
ATGAGAGGAAGGGTGAATACAGCCGGCTGGTCACCGCGCTCTTGGAGTGGATCCGACTCA
AGATCGAAGAGTTGAATGACAGGGAGCTGCCCAACTCTCTGGATGGAATTCAGCGTCTGC
TACTTGGCTTCAAGCAGTACAGGACTGTTGAGAAACCTCCCAAATACAAAGAGCGGTCGG
AGATCGAAGCGTTATATTTCCACATTAACACGATGCAGAAGAGTCTGGTGGGAGAACCCT
GGGCGCCACTGGAGGGACAGCTTCCTCAAGACTTGGAGAGAGCCTGGCAAAGATTGGAAC
AGGCCGAACACGCGAGAGAGATAGCGCTCAGGACCGAACTGCTCAGACAACAGAGACTCG
AACAACTCAATTACAAATTCAATACTAAGTCGGTCCTGCGTAAGGGCTACTTGAAGGAGA
TGATCCAGGTCCTGTCTGACCCTCGCTACGGCTCCAACCTGGCCCAGGTCGACGCCACTG
TCAAGAAACACGAGGCCATATCTGCGGACATACTGGCAAGAACCGAACGCTTCGAGGACT
TATCGGCAATGGCGGCAGAACTGGTCAGGGAGAAGTACCACGGCGCGGAAGCCGTCTCCA
GGACCGAGCAAGCGGTCCTGCAACGCTGGAGGGAGCTCCTGGAATTGCTGGAAAGACATA
GAGTGTCCTTGGGCAAGCTGGCCAGACTTATGGCACTACTGAGAGAAGCTGATGCCGTGA
AACATACGCTGGTTGAGATGAAGACCCAGTTCCAATCGGAGGAAGTCGGCAGGCATCTGT
CTGACGTGGAGAGGCTGCTGCAGGCGCACGCTCTCCAGGAGTTGCAGCTGGGCGCCGCGG
ACGAGAGCCTCAAGCGCCTCGTGCGGCTGGCGGCCGGCGTGGACGGCCCGGCGCAACCCC
AGGCGCAGCTGCAGAAGCAACTAGAGCAACTGCAGGAGGCTTACGACAGCCTGCTGGCGG
CGGCCAAGGACCGAAAGGCGAGGTTGGAGGACGCTCGTAACCTGTACCAATTCCTGGAGG
ACCACGAAGAAGAAGAAGGTTGGGTGACGGAGAAGCAGCGCATATGCCGCACCGACGTCG
CCGCCAAGGACCTGAGAGGAGTGCTGGCTCTGAAGCAGAAACACACGGGGCTAATGCACG
AGCTGAGGGCCAGGGAGCACGTCTCCCAGCGACACAAGTCCAAGGGTCAAAGCCTGATAG
ACGCCGGTCACCCGAAGAGCGCTGAGATCGAACGGCGGCTGACCTCGCTCAGCAAGCAGT
GGGAGACGCTCAGGGACCTGGCCGCGGCACGAGAGAAACAACTGGCTGACGCTGCAGAGG
CTCACCAGTTCTACGGGGACGCGAATGAGGCGGAGTCCTGGATGAAGGAGAAGCGTCCGC
TGGTGAGCACCGCGGACTGCGGGCAGGACGCCGCCGGCGCCGC
(2683 bp)

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