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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25507_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		adaptor_protein_complex-1_gamma_subunit_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0005215 F transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019886 P antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030119 C AP-type membrane coat adaptor complex
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0030665 C clathrin-coated vesicle membrane
GO:0030669 C clathrin-coated endocytic vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0032438 P melanosome organization
GO:0032588 C trans-Golgi network membrane
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0050690 P regulation of defense response to virus by virus
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
Transcript
Level		FPKM:6.45 TPM:5.97
ORF Entry
Sequence
(Nucleotide)
GGGCGCGGCGCTCGGCTCCACGTTGTTGTTGGCGAGCAGCAGGGCGGGCGCGGCGGCGGG
CACACTCGGAGTTAGATCTAGACCGCTCAGCAAGTCTAAGATGTCATTACTGCTAGTATT
ATTGTTGGTAGTAGCGATTTGTTCAGGCTGGTGTTCCACATCTCCGTTCGTCAACGAATC
AGACCCGTTAATTAAGTCCAATAAGGCGTCCTGGTCAGGCTTGGTGTGGTCGGGGCTGGT
GTCGCTGAGGTCGAGCTCCTGCTCGTCGCGGTGCGGCGCGGCGACGGGCTCCATGGCGGG
CATGCGCTCCAGCAGCGCGGGTCGGAGGTGCCCGTATTGTCTGAAGAGTTGAGATAGTTC
AACTCCACGCTGCTGCAGCTCGATGTGGATGTGAGATCCGAACGTGTCTATGATCACTCT
TATTTTTTCCTGGCTGGCTTGTGTGGTGAATCTGGTCGACAGTTTGGCCAAAGAAAGTAA
GAGGAACTCTTTAGTGCTGATCGAGAGCTGCGTGGACCAAAGCAGCTTCTGATATATGTC
AATCACGTATTCTTCAGTCGGCCTCACAAAATCATCGACACCGTCTTCATCCACCATAGA
GATAGCGCTGCTGGCTTCCGATACTAACAAATCTCCATATTCACCAATAGTCCAAGCGGC
AACCTGAATTAAAGGTTGTTTCTCTGTGGCAAGTCCCGAGACAGCCGACTGTTCCAGAGA
AGTCCACAGTCGCATGGCGCCGTACGCCTGACGCTCCGTCGCGGCTGACGATATGATCTG
TATCGTGCTCGACACCGTGTCGTCTCGTAAGTAGTTGCCAGCCTTGAGCAGGACCTTGAA
GAGCGTGTCGAGGTGCCACTTGTCGGAGGGCGCGTACCGCTCGGCGGCGAGCACCACGGC
GCTGGAGCAGTGCGCCTTGAACTCGGCGTCGCTGCGCTCCAGGAACGCCAGCAGCTCCTT
CATCATGCCGCGGATGTTCTGCCCGTTCACCAGCGCGAACGACAGCTCCATGGCGCGCCG
CCGGATCGAGATGTCCGGGTCCTTGAGACACTCGAGGATGGTGGTCCGGTGCCTCTGCAC
GGCCGAGGTGTCGACGTGCACGGTCCTCAGTAGCGTGTTGAGCGCGACGTAGCGGATGTT
CTTGTCGTTGTTCAGCAGGAACCTCCCCAGGATGTTGACGGCCAACACCCTGAGGCTGCT
CTCGGACTTGATGTCCATTATCGACAGCACCGTCTCGTACAGGATGGTGTTGCCGACGTT
CTTGCTGGTCTCCGTGTTGGTGGCCACCTGGGCCAATATGTCGTTCATCGCCTCCGAAGC
TTCGGCGTCGTTCTTGCCCAGTATCCGCAGCAGACGCAGTATCTTCACCTGCAGGAACGG
ATCGGATACGCCGCTGACGTCATGTTCCGGAGAATATCCGGCCAGTATAAGATTCTTTAA
TATCCTCACCAGATTAGGAACGATCTTTTTGAAATGATTAAGCGTGTCGGGACTGTTCTC
ACACATTTCGGTGATAAGTGTAACGCCTGTTATGAGGACACCATGATTCTTTTCGGTAAG
TAGACTTCTAGTGGCCGGCAAGAACATCTCCATTAAATCTGGTACTCTCCTGATGATCCT
GAACGCGCAAAGCGCCGCCTTCTTCTTTATGTAGGCGTTCGGTGACTTTATCAGACGCTC
CACTTCCGAAGCCAAGTCCCTGGCCATCTCCGGCGAGGCTATGGCTCCGAGGGTGCACAG
CGCGAGCCCGACCACGAACTGTGTGTTGCTGTTGAGGTCGTTCTTTAAGCAGTTCGTGAT
GAGGAGATGGACATCTTGGCGTTCGTCCAGAAGTAGCATCGCGCCGAGGTAGCCGACTCG
TTTGTCCGTGAATCGAGGACTTGCGATCAGCTTTAGGCACTCCAGCTGACCGAAATGGGC
CGGATAACCCAGCATGTGGATGTACAGGAGCTTGGCAATGTTGCGACATCTCCAGACGCT
GTCTTCTTCTCTGAACGTAGACCTAATGTAGGCGCATTCCTTGTTGACGACGCTTCGTTC
TTCTGCGGCGGTCCTAGCGGCTCTGATTTGCCTTATAAGATCCCTGAGTCGGGTCGGTGT
CGGCATCCGCACTCTCTCTATGGCCTCGTTTACCACTTGCTTGATAGTGGCAATGTTGAA
GGCCGGGTTGAACCTTCTATTTTGCTCAGGCGGCAACACACTCCAATCTACTTCATACAT
AGGATATGCCATGGTTGCAGTGAAAAACAACACATAAAATAACTATAAATCTTTTAATAA
AAACATTTCACACAGTATGCCACGATATTTGACGACAGTGCAAACTAAACTGTTATCAGA
GGTGTTTTATCAGGTGCAGGTGCTCCTCAAATATCCAGTCACAACGTATCTCTTATCAAA
GGTACAATTTATCACTGAAAAAGGATAGCAATACCACTTCTAGTAATGTTTTATTTTCAA
ATGTCAATACTGTACAAAACAATGGACTGAACGAGTCATATACACATTATCTTAATAGGA
AAACTAATTATTATTCATTGTATTATGTAGGTACGACTCGATACGATTACTGAGCATGTA
TCGTGCGTGTGTCGCTCTTTAAATGCTCATAAGTTATCATCGTGGTTACGGGGAGGACGA
TCGACGCTGTTGCGTTTTATGCAGTCTACAAGCCATCGGATGCCTTCGTCCACGCCATCA
CCAGTTAATGCCGATGTTGCCATTAACATGATGTCCCTAGCACCAATTAGGTGTGCGTTC
TGATTGAATATGGGCTTCACTGTGTGGACGCCCATGCAGTCTGGAATGTCTTGTTTGTTC
GCAAGCACCAGCAAAGGTACACCGGCTAAATGTTCTGAGGATATCATTCTATCAAAGGTT
TCTTTGGATTCAGATACCCTGTCCCTATCTGATGAGTCAACTATGTAGATTACTGCATGG
CATTCAGCATAGTACTTATCCCATAGGGATTGTAATTCTTGCTGACCACCAAGGTCCCAG
AAATTAAGTCTTACACCGTTCACATCTATTTTACCTATATTAAGTCCGACTGTTGTTGTT
ATCCTATTTGGGTTCATAGCCTTATATTTTTTGGTAAATTTTGTTTTCGTTGCTTCCAAA
TATGTCGTTTTTCCAGCATTGTCTAGGCCGAGTATTAGAACGCAATATTCGTCTTTCTGT
ATTATATACTTATAAAAGCCGTGCAGTAAAGTGTACATTTTAAATAATTTACCTACTCTA
ACAAAACATAATTGTAAAGTTCTAATCTACATTCATGTAGAAGGGAAAACAAGAAATTAA
ATGAAACAATCGGAGTAGTACCAAAGACCTATTGCGGTATTCACCGGACCTATAGCTACC
TTTATTTAATTCTGTTTAAAAAGTAAGAGAT
(3391 bp)

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