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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25492_c7_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_pseudouridylate_synthase_domain-containing_protein_2-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:10.46 TPM:9.69
ORF Entry
Sequence
(Nucleotide)
CCCAACGTTTGCGTGGGTGAGACGTTGCGTTCTTTTGTTCGTTTCCCGCGAAAATTTTAC
GTTACGTTTTCGTCGTGGTATTTTTACAAATAGTTTTTTTCTTGGGTTAATTAATAATCG
TCTGTTATTACATGTTCGCTATTTGTCACGTTTATTGATAAATGAATCGACTGTGGTGAT
TAAATTAGAGTGTTTTTGCGGAGTTTTGAATTTTAATAGAGGATTTCCATTTTTTCCGGA
CGATAATTGAGTAGTGTAAAGTGCATACAAGTTCTGATGTTCGGTGATCGGGGATAACGG
TGTGTGCGTGTTGAATGCAAGTGTAATCGAGCTGGCGTGGTACGGGGCCGGCGGGGGCAT
GCAGGCCGGGGGGGGCTGGTTCCTGCCATGGACGATGGGAATGCAGAAGTTTGCGGTAGC
GTTGCCAATGGGCGGCATGGTGCCATTGGTGCCTCCGCTCTTGGCAGCGTTACCGCCCGC
ACCGCCCCCTCTTCGGCTTATAGCCCCACCGCAGATTCAACATCAGGCACAACCAGGCAG
AAAGGGAGAAAAAGACAACGGCAAGAACATAATCTTATCTTGCGAGAAGAGGAAAGCAGA
TGACAGCGAAATCAACAAAGACTTAAAAAAGGCTAAATTAGAAACGAAGGCTTTAAAAGC
AAAGAGGCCCGGCTTCACGGACGACAGATACAACGAGACATCTTATTACATGGAAAACGG
TCTTAGAAAAGTCTACCCGTACTATTTCACGTTCACGACCTTCACGAAAGGGAGATGGGT
CGGGGAGAAGATCCTGGATGTCTTCGCGAGAGAGTTCAGGGCGCACCCTGCAGCGGAGTA
CGAAAGGTGCATCAGGGCCGGTACCCTCACGGTCAACTACGAGAGGGTCGACCCTGATTA
CAGACTCAAACACAACGACCTTCTAGCCAACGTAGTGCACAGGCACGAAGTACCGGTCAC
CAGCCAACCCATCACCCTCGTTCATATCGACGAGGACATTGTGGTTGTCAACAAACCGGC
CTCTATCCCCGTGCATCCGTGCGGTCGCTACAGACACAATACCGTTGTTTTTATCCTCGC
GAAGGAATACAACTTGAAGAACCTGAGGAC
(1110 bp)

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