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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25492_c10_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vam6/Vps39-like_protein_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030897 C HOPS complex
GO:0031902 C late endosome membrane
GO:0034058 P endosomal vesicle fusion
GO:0097576 P vacuole fusion
GO:1902774 P late endosome to lysosome transport
GO:1990126 P endocytic recycling
Transcript
Level		FPKM:4.78 TPM:4.43
ORF Entry
Sequence
(Nucleotide)
GTAAACCTACATAAAGTTCATACATTGCTTGTCATCATTCAAATAAATATTTCTTTTTTG
TTTCTACTCGGTATTTACAAAAGCTTAATTTAATATACCATAATATACCCTCCGCTTGTA
GATGCACCAAATTCACTTTTGGCAATTTTATTATGGGTATTCGAAAAAAAAAGGATCTTG
ATGAACACAAAGTCATAGTTTCCTACGAAATGGGAGGATTCAGATTCGTGTAAGGTTTTC
ATCTAAACGAAATTGTTTTGTTGTTATAATTACAAAATTGTGTAAAATGCACGAAGCGTA
TGAAGTTTCACATCTGCTTAATGCCACCGTGCAGATCGAAGCAATAGCTGCATTCGAGAA
TAACCTATTATTAGGTACGAGGCAAGGCCATTTATTGATGTACTCTTTATCAACAAATAA
TGAAGAGCAAAAGTATCAGGTACATTTGTTAAGATACAGGAAGAATTTTAGCAAAAAACC
TATTCAGCAAATTGAAGTTATACCAGATGAAAATCTATTATTATGTCTGACAGATTCTAC
ACTAGCTACATACAACATTAATGGTGTTAATTTTCCATTAATAAAAACTTTTGAACAGAC
AAAGGGTGCTTCACTTTTTGCTTTGGATTGTAAGGTTTCATCTAGTAATGGTGCAGCGTC
ATCTGATGTTCGCCTTTGCGTTGCAGTAAGGAGGAAACTTCAAGTGTACTGCGGGAGTAA
GGGTGAATTTAAACACATGCTAGACCTAAATATACCAGATGTACCTAAAGTAATGGCCTG
GGGTCTGCAGTATCTATGTGTGGGATTTAAAGCGGAGTACACCCTATATGATGTGTCAGA
TGGAAAACCAAAAGAACTATTTCCCACAAGTAGTTCTAAATCATTAGAGCCAACTATTTC
TAAGTACACAGAGACATCTTTCCTAGTAGGACGTGACCAAACTTCGGTTCTTATAGAGGA
GTCTAATAAAAATGTCGATATAAAGAAAACTATTAAATGGAAGGAGGCGCCTCTTGCTGT
GGTGTGGGATCAGCCGTTTGTACTGGGTCTATTGCAAGATCAAGTTGTTGTGCAGACTGT
GGAGCCAGCGTTTTATATACAATCATTGTCCGAATTGAATAAAGCAAGACTGATGTACAG
ATGCAAACGAGGCTTAATATTCGTGGCTTCCGTCGGGCAGGTGTGGTGTCTCAGCTTAGT
CGACATAACGAAACAAAGGCAACAGTTACTGAAAGACAAACAGTTCCAAATAGCTATAGA
GTTAACTACGCTGTCACAATGCTCGCCCGAGGAGAAAAAACAAAAAATACATTCCATACA
AGTGCTGAATGCACTAGAAGACTTCGACAACAAATGTTACACGCAAGCGATGCAGGAATT
CGCCAAACTAAACACCGATCCGGCCGATGTCATCAAATTGTTTCCTGAACTAGACGGCCG
TACAGACGGCGAGAAAAGTGGAAAGCTGAAAGGGAAAGATTTAGAGAACGCTCTGAACGC
ACTTATACCGTATTTAGTTGAACTGCGAAGAAAGATCGGCAAGGGCAGTCCCGAACCTAA
CGGGTCTCCTCCGCAAGAAGGAACCAGCCAAAGAAACGTCGCTCAGCAGATGGAGTTGAT
TGATACAACGCTTCTGAAATGCTATTTAATGACAAACGACGCATTTGTCGCGCCCCTGTT
ACGTTTGAACAATTGTCGTTTAGAGGAGGCCGAGAAGACATTACTGCAACACGGCAAGCA
CAGCGAACTGATAATACTGTACCAAACTAAAGGGCAGCACACGAAGGCGCTACAGCTGCT
GCGGGAACAAGCCAAACAGCCCGACTCCAGCCTCGAGGGATATCGGGGCACTAAAAACTA
CTTGCAACAGTTAGGTGCCGAGCATATAAATTTAATATTCAACTTTTCCGATTGGATTCT
GAAAGAGAACCCCGAGGAGGGCCTGAAGATATTCACGGAAGATAAAATCGAAGTCGAAAA
CTTACCCCGCCCGAAAGTACTCGATTTCTTACTGAGAGAACACGAATCGCTTGTGATACC
TTACCTGGAACACATAATACACACGTGGAACGATACGAATCCATTGTTCCACGACGCCCT
AATAAACATGTACAGGGAGAAAATAATTAATAAGAAAGCGAATATTACCGAAGAAGAATT
GCTGCATACGAAGTCGAAGCTGTTGGCTTTTCTAGAAAAATCGACTCACTACACGCCCGA
GAGAGTGTTGCTTCATTTCCCTACCGATGGATTGTTTGAGGAGCGCGCCGTGGTGCTGGG
GAAGCTGGGACGACACGAAATGGCGCTCGCAATATATGTCCTGATATTGGGGGACGTGGA
AAGAGCGATGCGATACTGTGAAAACGTGAGTGAAAATCTCAAGGACAAGAGTCAAGACGT
TTACGTTATCCTCATGAAGATATTGATGAATCCCGATCAGATTGCCGCCCTTAGCGGACC
GCTCGCCAACGTACCAAGACACCCGAAAACGTCAGTGCCCGATCTAGAAACGGCTCTGGA
TATATTGGAAAAACACGCTGACAAGATCTCTCCCTTAAAAGCACTCGCAGTATTACCAGA
TTCGGTGCCGCTTAGCCGATTGAAACACTTTCTGGAAAGCTCATTAGAGGCTCAACTCAC
GTTGAAACGGAGAATGCAAATACTCAAAGGACTGTTGTATGCGGAACATATGCAGGTCCA
AGAGCTGAAGCATTACCACGAATCAAAGAGTGTTGTTATAAACGACTATGACGTGTGTCA
AGTTTGCAAGAAGCGCTTCGGTCATCAGAGCGCGTTCGTGCGTTATCCAAACGGTGACAT
TGTTCATTATTCGTGTAGAAGCGATAAATAGAATGTTACCGGCGTTTAATTAATACGAAA
TTAATTTCAGAACTGCTCTTCGTTTATTGATAGACTATTTTTTGTCTTTTTTTTTTGCGA
AGGAATTCGCGATCGTTCAGCCTACATGAGAACTAGTGGCTAGTCAAACTGCTGTCTACC
GCATAGAAAATAAATTTGAAAGGAAACTCATTTGCAGAGCCAAATGCCTAATAGCTCTGC
AAATGGCATTGGATGATCGCTGTGGTTACCGGTGGTGGTGACGAACTTTGCTTCGGAGGC
AAGCGATATGATGGTGAAAAATACAATATTATTTCCATCAATTCGTGAAATCACTACCAA
AATTTAAAATGATGTTCAAAGCAAACAATATAATATAATTATGTATTTGTTACAAAAATA
TTTATTTCTTGAAATGTGTCTACTGTGATAATATGATTGTTAATTTATGCCGCGAGTTGT
AACTAATTCGTGACAGCAATTATGTTCAGAATAAAATGTTAGTCGACTTAAGTTATATTT
ATAATGAAACAGCTATCATTGAACTAAGAACAGTTTTGTAATATTGTCAACGTCGATATA
GTATCTCGTTGGTGTAAAAATGTTTATATACGCAACGAATTGTAACGAGAGTTGCTGCCT
CTAATTTGATAAAAGAGAAAATCGACTTTATTTTCATTAGTGATAATATATAAAGAGAAT
GCAATAATAAATTTTATTTAATAATAATATATTGTGAATGAGTTTTTGTATAATATGGCT
ATGATTTAGAAACTTTATTCAGTTTTCTAGCATCCGATAAACGCATTATGTACACTCATA
TATAGTGAGTTTCAAACAAGAACGTGCACGTCAATGACCTTGATCTGTCAAAGTTCGATA
AAAAATTACGGACAGCAACAAAAAAAAATT
(3750 bp)

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