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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25492_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_RNA_pseudouridylate_synthase_domain-containing_protein_2-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005575 C cellular_component
GO:0005739 C mitochondrion
GO:0008150 P biological_process
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0019239 F deaminase activity
GO:0031119 P tRNA pseudouridine synthesis
GO:0044822 F RNA binding
Transcript
Level		FPKM:7.63 TPM:7.06
ORF Entry
Sequence
(Nucleotide)
GAGGTAGTATCGATAAAATGACTACATAATAACATGTACAAATAAAATTAATATTCAATT
TAAACATTTATTTTGAAAAAAATATTCAGAGACAATATGTAAGTAAGTAAGGTAATAAGT
TCGAAATGAGAATTAAGAATTTATAATTGTTTTTTTTTCAATAATAATTTATTTTAAATC
GCACTTTTAAATTATGTTCCGCATATTATCATGGATACCCTAATCTTTCCCAGATTTAGC
GTCCTATACAAATTAGTAATTTCGCGTTGTTTTTATTTGATTTTTGGTAATAAAATACAC
GTGTATTAAGCACAGCACAAACCAAAACGGTTAATATGTATAAATAGAATTTACTTTGAC
TCTCTGAATAGCTAATCGTGAGAAATCTGAAAGCCTTTTCACTTTAATTTGACGTGTGAT
AACAGTAATAACCCTGCCTCAATAGAATGATCGATATATTTTTAATAGTATTGACCATTA
AAAAAAACACGCTAAATTTTACCCCTCCGTATAACAATTATGTTTCGAAACGAGCTGAGA
ATTATTCTAAGCCAATAGGAACCGAAATCCAATCCAAATATTAGTTTAAGAAGTTGCAAC
CAAAGTCGAAAATTCCAGATCTGTAGAGCTTCATCTCTGTCGCGCACGAGACATTTTCCG
CTGCGCAACAGACGACGCTACATAAGCGAAATTGTAGATTAGATTTTTCTAATACCCGAT
CTCCAACAAGTTGCGAGTCGTAATATATGTATACATAAAAATAAAAATAAAAAAAACAAA
AAATCAATTTTAACACAAAAATGTTTTTCAAACAAAGGCATCAGTGAAAATGTGTTTTTT
TTCTTACACTAAAAACATCACTTTTCAATATAACTCAGCGGAATACTGAAATGACACCGG
TGAGTTTAGATTATTATCGACCTTTTTTTTATTTAAACTTCAACACGATCAGATACAATG
TTTTTAACAAACAAACAAAAAATCTTAATTGTTAATTCACCATCAATATCTATATTTAAG
CTACTACATACGGAAGTCCTATAATTATAATGTTTACAATTTGGTCTTGAAGTTTATTTG
AATGGTCTAGAGATGTGGAGGGGGCGGCGTCGCGGCGCGGGACTATGAGTTCTCCGGCTC
GTCCCAGTCTAGGCTCGCCCACTGCGGCAGCTCCGTCTCGTATTCCCATCCTGGGCCCTT
GTACTTCCAGGCGTGTAGGTACATGACGAGGTCGCGCGGGCGCGGGTCGCGGTACCGCAC
GCGGCACTCGTAGCAGTGCGGGTCGATGACCTCAGCCGCGCCCGCCGCGCTCGTTGCGGT
CTCCGCGCAGCCCGTCTGCGTCGCCACCGTCACCTTGTCTGACTTGGCATCGTTAGAGTC
TTCGTTGATAGGGAGCGTGGCGAGGGGGGTGGGGGAGGGCGGCGCGCGAGGTGACTCCTC
CGCCGGGGCCTCAGCGCCGCTCGACGGACTCGCTAGAGTTGGAGTCATGACGGTAGAGGC
TGTCACTCCGGGCGCTGGCGAATCTAATCTCGGTGAAGACTCCCTGGAAGCGGGTCCTGT
GTCGCAGTCGTCTTCGCCAACTTTATCATCGGGCGCCGGCTTCGAGAACAGCAAATCGTC
ATCTGCAGCATCAACACCGAGCCAGTTCTCGGCGTTGTGGATGGCGATCAGATCCCGGAC
TAGTTGCTCGTCAGTTTTGCCGCCGGTGTCGCCGCCCTTACCGCGCAGTGGCCCGAACAC
AGGGTGGTTGTACAGGGGATCGTTTACTACCGGGTAACCTAGGTACTGCAGGTGAACTCT
GATCTGGTGCATTCTACCGGTCTTCGGGCGACAGAGCACCACGCTAGTGTTGTTCGTCTG
GTTGAAGCCAAGTCGCTTGAACACAGTCGAACAGTCCTTGCCTTTCGGAGACACCTTGCA
CACGCCTATTTTGTAGCTGACCACTTCTATTGGCTCTTGACATTCTATTTCCTCGTCAGG
AAATTCTCCGTCGACCCTGCAGACGTATTCCTTCTGGACTTGTCGGTTCCTAATCTGGTG
CTCCATCTGTCTAGCTTTCTTCGGACTCCTCCCGAACAGAAGAAGTCCTGACGTGAGCCT
GTCCAGTCTGTGGATGGTCCTCAGGTTCTTCAAGTTGTATT
(2141 bp)

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