SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25478_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		ku_P80_DNA_helicase_[Danaus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0016817 F hydrolase activity, acting on acid anhydrides
GO:0030587 P sorocarp development
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
Transcript
Level		FPKM:2.34 TPM:2.16
ORF Entry
Sequence
(Nucleotide)
GTTTACTTGACCGTTCGTACTTCGTTGCTCATGCTTCAACTCAGTCAAACTCAGTCTGTA
GCTAAATCCTAAAAAAATTACAAACTGCTTGTCCAACATCATTCAGAATTTCATTAAAAA
AAATTTATTTGCTCGTTCTTGATCAGTGAATTTCACAAGCTTGAAAGTTTCACTGTTGTG
TATTCAAGTTATATCACTACTACAAAATGCCTCCTAAAATAGATCAGGGCTTGATAATAA
TTTTGGATAATGGAAGAAACGTTGCAAATGCCGATGAAAAAGACAAAAAAAGCTTTTATG
ATATGGCGCGTGAATGTGCCGCTCGGATTATTGAAACCAAAATTCTCAGTCAAGCTAAGA
ACAGTTATGTGGGTGTAATTCTGCTCGGATCGAAGAATACGAAGAACAGCGTAGCTGAAC
AAGCTCCTGGAGAGTTCAAACATATAGAATTGTTATCCGCCCTGCAAACACCTACTTGGC
AAATGATTAGGGAACTACCGGAGTCGCCCAGCAAGTCTAAAGGCGATTGGATGGATGCTC
TAATTGTAGCAGCTGATCATTTCAAAAATGGTGTCTACGGCGTAAAGATAATTAAAACAA
AGATAATTCTTCTAACCAACTTTTGCACTTTAACGAAATATGATCATGATGAAATACAAC
AGGTCCTGAATGGTTTCAAGGCTGACAACCTAGAAGTCAATGTTATAGGACCTAACCTTT
ATGATGAAGGAAACATCAAAAACAATGACTTTGAACTTGCAAGGCTGTTTGTTGAAGAAA
CCAAAGGTGCTGCTGAGCCTTTTGGATCGGCAATGAGTTTT
(821 bp)

- SilkBase 1999-2023 -