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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25475_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-13-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008289 F lipid binding
GO:0009968 P negative regulation of signal transduction
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031901 C early endosome membrane
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0035091 F phosphatidylinositol binding
GO:0043547 P positive regulation of GTPase activity
Transcript
Level		FPKM:4.53 TPM:4.20
ORF Entry
Sequence
(Nucleotide)
AGCGAAACTGTAGATTCATTTCTAAATGAAATAATTGTAATAATTATAAATGATTATGTT
ACACCATGGTATGAGATTTTGACAAATGATGATGAGTTCACTAAGCATGCAATAAAACGT
TTGGTGCTTGCTACTGGTGCTAATGTAGTTAATAGGATAAAATGTGTGGATTGGATTAAT
TTGCTCTCAACAAGATTTCCTGAAGAACTAACAACTCATTTGAAGATGTTTAAGCAATCA
AGAGTTCGCCTGAAACATGTAGAGTTAATGAATGCCAAAGAATCAGCAAATGATACTGCT
AAACTAAGTCCAAAAAGGGATGAGAAGAAAACACACAGAAGGAACAAGAGTGAAACAGAT
TTATCTTGGTTGCCAGACTCTCAAATATTTGGTAAATCAAAATTTTATGATAGCTCTGAA
AATATTACAGGGAAAACATTAAAAGATATATTTTTTGAACTTGAATGTGCTATAGAAAAT
AAACAAATGTGTAGAGATGTGTTCTGTGATGATACAGATAAAGAATATGAGCTCCTTTGT
GAGGTATCTGAAGCAATATTGTACTTGGTAGCTCCAGAAGAAGCATGGGGATGTCATGCA
ATGAAGACGATTTTGATTGATCTTTTATCAGCCGTTGTTTTACGCCCCATAATCAGTTTA
ATGAGTGATCCTGATAATATCAACAGAATGATCATAAAATCTTGTTGCAAAGATTCAATA
CTTCCATCAGAACTCTTTTTGATAGTCATAAGAAGCTGTGGGGATGCTGAAGAGTTGGAC
GCAACTTTAGAATTAGTGGAAAAGGATATACAGAAACTACATTCTAAAGACAGCGCCGGC
GAATGGGAGCTTCAGGATCGTCAGAAATTATCCTCGTTACAGTACGTGACCAGGATCATA
CAGGCCAGAAGGGCTACGTTAGGTCCTCAAGAAGGTACTCTGAATAATTTGAATACACAA
AAAATGTCCGAGGAAATTGCGAGAACATTGAAGTTTTTGAGAGCAACAGCAGCGTGGAAG
TCTAACGCGCAATATTTACTAGAGATAGAGCTCCATGAATCAGACGCTCCGCACACATCG
AAAGAGGTCATAGACAACTTACGTTCGTCCGCACTAGAGTTGTGCGATCTGTTTTTATCG
CCGAACAAACCGCCGGTCATGGGCGTGCCGGAGAACTGTTATTCGGAACTCGTCCGTAAA
ATCACGACCGAAGGAGAGGAATTTACGAACAATCCAGTTGTGTGTTTTGACGAGCTGCAG
AAATGCGTCTGCGATGCTTTAGAGGACGATCCTTCTTGGCAAGCCGATTTTATGATGGAA
ACTGAGGATGGTACTTACAGAAGTAATAGTGACCTGAAAACCGATCCAAAATCGGACAGT
AAAAAGTATACCGGTGACTTATTACACGTTCCCGGTACAAGACATAACCGTTCAAGGTCT
GATATAGTTGGAAATTTGGCTGAAAGGATGAACAATGAGGGTGCAGGACCCTCAAGTTTG
ACAGCTAACTCCAGCTTGTCGATGTCGCACACGGAAATCAGTAGGAAAGCCAAAAATTTA
CTATCACCGCTATCGGCTTGTATTATAGAAACAGCACTAGTACAAGACAAAGGTCGAGCC
TTTGGTATATACGCCATAGCCGTTACGAGACTTTCAGATAACGAGGTGTGGCACATATAT
AGGAGATACAGTGATTTCTATGACCTGCATTGCTCTATTAAAGAAAAGTGGCCAGAACTT
GGGAACGTTCCATTTCCGGCTAAAAAGACGTTTCAGAATACGTCACGAGTAGTTTTGGAG
AACAGGAAACGGATACTGAACGGCTACCTTCAGACTCTGGCCAGCCTTTCGAGGGAGGCA
AAGTACATGGCGCTGCTGTCGCGGGACTACTTGGGGGGATTCCTCAGTCCGGTCAATCAA
ACCGAAAAACATAGTAATACGATCGATGCGCTTCTCGTGAACCCCCTGAGAGCCGGAATG
AGGACATTGAAAAACATGCCGGATCAGTTCGTGAACACTGTCGACGGAGTTATGGACGGA
ATCTCAAAGGTCTTCCAAGGAAAGAACACTGAAAATTACTACGACGGCATTAAAACCGGC
AACGCAACCGACGGACAAGACGACGGCGATGAAAGCATGGCATTGAAGCTCTTGGAAGAA
GTGCTTGGCATCCGAGGGTTGTGGCTCAGGCGTCGACTTCTTGCGCCACTCAGAACCCTC
ATTGCGGATCGCGTGAACAGGAAAGTTTTAGAACTCGTATCGTCGTTGACGTCACCTCGC
AACGTGGTTCAGTATTTGAAAACGTTCAAGCAATGGTTAACTAGCCGACACAGCGCCAGT
TACAGCGAAAGGGATGCGGCGACCAAAGCGAGAACGAGGGTTGCCGCTAAAGTCGCACTG
CTCTCGGCCTGCTCTGATGATCTCAAACATATAGTCGGTACTGATTCAGCTCGAAGAGGT
CTCCTCACAGTATTCGATTTATTCCAAATAGAAGAAATCAACAGACGCTTAATATTCGTT
TTGTTGGAAGTAACCTTAACCAATCTCTTTCCCGACAACAACATACAAGGTCTGTTCAAG
AAACTTTACACGAATTCTCCTAGAGTATCAGCGCCGAAGAAGAATTCTGTTATATGAAAA
ATACTCAACGTTTTGTGTTCTGATTCGATTCAGATTTGGACTATTTAACGGTTGAATTGG
AATGAAAAGTAAAAAAAAAAATTATTATAAATAAAAAAGGACACCCTTTATGCAAATGTA
GTCAGATAGAATATACAGGGTGTGGAAACGGCATTCCCGAAATCGAAACGCGATTAAATG
AAAAACTTAAGGTGAAGGGACAACAATATTATTTTACTACACAATGCATAGTTACTTTTT
TAGTCAGTTCATAAATAAATAAATAATAAATATT
(2914 bp)

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