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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25472_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_putative_leucine-rich_repeat-containing_protein_DDB_G0290503_isoform_X2_[Bombyx_mori]
Ontology
GO:0000290 P deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0030014 C CCR4-NOT complex
GO:0033962 P P-body assembly
Transcript
Level		FPKM:4.13 TPM:3.82
ORF Entry
Sequence
(Nucleotide)
TGACAAGTCATGACATTTATGTACAAGATTTATGAAAAAATCCAATGGCAGATTCATTCT
TTGGGTTCGATACTTCATTATCGAACTTAAATGACGACGAAGGTTGCGCAGAACCCTCAG
AGGACGAATACGATGCGTTGAACGATGAGACATTCGGCCATGGATCCGACGAATATGACT
GGGAGGTGGAACATGAGCACCTCGCCGGACAGCTCGAGAGCAGTCGACGCCAGAACAGCG
GCATCGACGAGATTGCCAACTCACAGCTCGAGCTGTCACTGTCGCAGCTAGTTTTGGACG
ATACGGACGCGCCGCAGTCCGGGTCGCTCGGCTCCAGCGTTTGGAGAAACGATGCGCCGT
TCCCAGGACCGCCGGCCCCGGCGCCGCTCAAGAACGTATGCACGGTCGAAGAGTTGGAGC
GGCAGCTGCGTCACGCGCAGTCGCAACCCATGCAACAGCACTCCTCGCAGCAGCCGTACA
ACTCGCAGAACTACTACCAGCCAAGGTTTCCGGTGATACTACAAAGACCTCCAGGCTTAC
AAGCGCCCGTATTAGTACCGTTCGTATCCCAGCAGCACAACATGAACCAACCAATGAACA
CAATGCTCAGTCAGAACAATCAAATTCAGCAAAACAATCAAATGATGAGCAATCAAATGG
GCCAAAACCAGTTTATGCAGAACAACCAGATTGGACAGTTTCAGAACAGTCAAATGGGAA
CGAATTTAGGGCCTAATGTACACCAGATGAGGCAAAACATGAAAATGAATCAAATGGGTC
CAAAGAAACCTATGCCACAGAACTTAAATCAGATGAGCCAAAACGTTAATCAAATGCCCA
AAAATATGACACAAATGGGACAGAATATCGCCCAACCACATCCTCAAATTAATCAGAACA
TCCCGCAAATGAATCCGAACATAAATCAAATGAACCTGTCTCAGATGCCGCATAATTACA
ATCACATGAACCAAAATTCTAGCCAAATGGGTCCAAGTATGAATCAGATTGGCCCAAACA
CAAACCACATGGGACCAGGTATAGGCCAAATATCCCAACCGATTAACAAACTAGGTTCAA
ACGTTAACCAAATGACGCCCAACATGAATCCAAACTCAAATCATATAAATCAAATGATTC
CCAATTTGAATAAAATGCCTCCCAATTCTCAGTTGGCTCAAAATTCAAACCAATTAAGCT
CTAACACAAAACCGATGAATCAAAACGTGAATCAAATGATGAACGGTAATCAGTTTGGCC
AAATGAATCAGTTCCCGCATATGATGGGCCAGCCACGCATGATGGGGCCTCCACCCGGTA
TCAATATGCCCAGGCAAAACTACAACCAGCAGAACGTTGGACAGTTTAATTCCAACATTC
GAGGGCCGACACTGAAGAATGAATCGCAGCAAGTGCCCACTCAACAATACAATCAGATCG
CGAACAAAATGAGCCAGCCAGCCAAATCAGTATCCCCGCAGAGGCTAAAGAAAATCGAAA
CGAAACAAAAGACAAGAATCTACAACAACACAAATTTATCCTCGCAGAATTTAGTTCAAA
TAATACAGAACACTCATCCGATACTGCAGTACAACAGCGGGTTCCATAATGCATCGCACC
ATCCCATGCTGGGTCGTGGTCCTCTGAACAATCAGCTCAACCATCCACTCTTGAATCAGA
GGCAGAACGGAACCTACAGTAACAGAGACTCCTCGCAAGACGAGGAGGTCGCCAACGAAG
ACGAGTACGCTGGTCTCATGTCGCAGAGAGAGAAGCAGTGGCTACTGAATATACAGATGC
TGCAACTGAACACGGGGACTCCGTACATACACGATTATTATTATACCGTCTTCTTAGAGA
GGCAGGCAAATAAAGAGAAGGAAGGCGTGAAGGAAGCTCACAAGGCCAACCAACAGAATC
ATCCCTTCTACAGCGGCATGAAGCAAGACGGTCACCAGCACAGAGAGCGGCACAACTCCA
ACCGACACAACTCGACGGGCGAGGAGGCCGGGGCTCCGCGGGCCTACGTGCCGACGCAGT
TCGAGAACTCGCTCGGGAAGCTGCAGTGTGGCAGCGTTACTGCCCCAAGGAAGTTGATAG
ATGTGGAAGTGGTCGGTGGAGAGGTGGCACCCTCCAGGATGTCCAGAGCTTCCAGTGTGG
CGAGTACAGCCAATCCTGCTGAAGCACCTAGAGAGATGAAAAGGACGAAACAATTGCTCC
TAGATATAGAAGCGCTGTATCTGATCCTGTTGAGATTAGAAGAGCTAAACGACCCGCTGG
CGATATCCAATGCGTTAATACTGAAGGAAAGAGAAGAGAAACAAAAACTATTAGACGGAG
CTCAGAAAGAACTGAACAAAGAGGACGATGACGATTCTAATCTGTTCTTGAAGAATATAG
AGTCAGTGCAGAGGAGGCCCAAACAGGAGAGCCCCAAGAACGAGAGCATCGATAAGAGAC
AGGTCGTTAACCTGGCGGTAGCCCAGAAGCCGGCACCGGTGAACCTTCTGGACGAGAACA
AGGATGACCTGATCAGCAAGATGTTCGCGGGCCTGCTGCACGCCGACCGCGTGGCGCAAA
TGATGAACGTCAGGAAGGGAAGGATGCTAATATCTCGCTTCGTGAGACGAGTGGGTCCGA
GTCACCCTCGCCTGCGCACGCTGTGGGGCCGCTTGCTGAGAGCGCTCACCGTCGCCCGAC
GTCACGACCCGACCGTCGATCTAGCGACCCCGTACGCAGAATACATCCAGAGCACGACGG
GCTGGTCGGCCGTGCTGGAGTCGTGCAGCGTTCTGTCCGAAGCGTTGGATCCCGCTCGCA
CGCCCCACGCTCTTTCGTCATCTTTCACGCTATCGGCCATCTGCGCTCTAGTACTGAAAG
CGTCTACCCTGGTGAGCACGGGTGAGCCCTCCGCCGGCGAGCGCCAGTGGGCCAAGTTCC
TGCGCACAGCGGCCCGCGG
(2959 bp)

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