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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25468_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_tRNA_pseudouridine(38/39)_synthase_[Bombyx_mori]
Ontology
GO:0001522 P pseudouridine synthesis
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0008033 P tRNA processing
GO:0009451 P RNA modification
GO:0009982 F pseudouridine synthase activity
GO:0016853 F isomerase activity
Transcript
Level		FPKM:0.21 TPM:0.20
ORF Entry
Sequence
(Nucleotide)
CAAAAATGTAAAAAATATTAAAAACGTGAAATTCCTCTGCATGTAATAATCATTATTTAC
TAACACAAAAATTAATTACGGCAGGATCTCGTCGAGAAAATAATACAGTTGCAAGCCCAT
AATACACAGCTGAAAAATATCATAAATAAAACTACACCTTGCGATGGCCAAAAACAGAAA
AAAGTAGACCAAAGAGAATTTATGTTTGAAAAATGCCATTATCGTCATGTCCTCCTAAGG
GTATCGTACCTTGGCTGGGAATACCAAGGTCTGGCTGTACAGGAGAATACAACACAAACA
GTAGAATATCATCTTTTTGAAGCCTTGAAAAGGGCCTGTTTGATACAAAGCCGTGAAACC
TCTAATTATCACCGATGTGGTCGTACGGACAAGGGAGTTAGCTCATTTGGGCAGGTCATA
TCGATATGCCTAAGGAGTAAACATTCACCGGAGGAACAAAACAAACCGAGCTGCATTAGA
AATGAGATTCCGTATAGTAAATTGTTGAATCGTCTGTTGCCCAAACATATAAAGGTTATT
GCTTGGATGCCAATACCGCAGGACAGACCGGATTACAGTGCACGATTCGATTGTAAAAAA
CGTTCCTACAAATATTATTTCCCGCACTCCGGGCTGAACCTGCCCGCCATGCTGGAAGCG
TGCCGTCACATGATCGGGTCGCACGATTTCCGCCATCTCTGTAAAATGGACGTCGGTAAT
GGTGTATTGGAATTTATAAGAAGAATAATGAATGTTGACATCGTACCTGTCGATGTTAAT
GATGTTGACAAACCAACATCAATGTACTATCTGCTGATAGAAGGAAACGCATTTCTGTGG
CATCAGATACGTTGCATTATGGGCGTCTTACTGCTGATAGGAGAAGAAAAAGAAAGACCT
GACGTGGTGTTAGAATTGTTGGACGTTGAGAAGAATCGGGGAAAACCGCAATACAGCATG
GCGTCTGACCTCCCGTTGAATTTGTTCAAATGTGCGTACGAGATAGAAGATACTAATCGA
TGGGTGTACGAAAGAGAAGCACTGATCACTCTCATATCTGATCTGAGAACGGAATGGACT
ATGCACGCCGTCAAGACAACGATGATTCAAGATTACATACGCGAGCTAGAAAAGGTTCCT
CTGACGAGCGAGACGGAAGATAGAGCCCATGACGAGTGCGAGCGAGACGAAATCGCGTCG
TACGCGGCGTGCTTGCTTCAAGGGGTGAAACCGAAAAATTATACTCCATTGATGAAAAGA
CCCACATGTTCAACGCTACACGAAAAGATTGCGCATTACAAGAAGAGACGGAAGATAATA
ACAAGCTAATAATTTCAAGGGTCATTAACTCTAGATGAGGCATTTTTTGCATTTTTATAA
TAAAAAATAATTTTGATCGGAAAAAAAAAAAAAAAA
(1416 bp)

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