SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25467_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		carotenoid-binding_protein_isoform_1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0006629 P lipid metabolic process
GO:0006694 P steroid biosynthetic process
GO:0006701 P progesterone biosynthetic process
GO:0006810 P transport
GO:0006839 P mitochondrial transport
GO:0006869 P lipid transport
GO:0008202 P steroid metabolic process
GO:0008203 P cholesterol metabolic process
GO:0008289 F lipid binding
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031902 C late endosome membrane
Transcript
Level		FPKM:2.96 TPM:2.74
ORF Entry
Sequence
(Nucleotide)
ATTTGATAACAATACAATTGTTTGATAACATAAAATTAATTGAAACAGTCTCACAACGAG
ATGTGTAATTATTAGTAACGTGCCATTAACTGCATTTCAATTTATACCCATCGAATTATG
CATTTTATGACAAATTAATAAGTTTATTTGCAATTGGACCAAAGAGTTAGTAATTGAGTG
CAATGTCTCATCCTCACATACGAGAAGCAGCTGAATCTCTCTTAAACAGCGTCACATCCC
CGCCTTATAGAATGATGAATCATTCACAGTCCGTGAATCTGATGACCGAGGACCTAGTGG
CGGGACACAGGCCCGCCGGGAAGATGTCCTCGGTCAGAAGGTTCTTCTGTCTCTTCGTGA
CCTTCGATTTAATGTTCACAAGCCTCATGTGGCTGATTTGTGTTATGGTTCGTAACGAGA
CGTTAGACCAAATATTGCAAAGAGAAATTATTAGTTATAATATAAAACTATCGTTATTCG
ACATAGTGGTGTTAGCTGTGATAAGATTTACAATATTATTGTTGTTCTACGCTTTATTAT
ATATCAACAATTGGAGTGTGATAGCTCTCTCGACAAGCGGCACTTGCGCCTTTTTAATAG
CGAAAGTGTTCGTATTCGTTTGGTCCGATGCGTCACAGCCCGTGTATCAAGTGTTCCTTA
TACTGACTTCGTTTACCTTGTCATGGGGAGAGGCCTGGTTCTTGGACTTCAGGGTCTTAC
CGCAGGAGCTACACTGCAAGGAGATACTAGATTCCTTAGCTCAGCACAGCGTCTCCGAGC
GCACGCCGCTACTGGACCCTCAGCCCGGTGTGAATTCGACGTACGCGGAGTCCACGGTTA
AATGGTTCTCCCCGGTCGACACGCCGGAGTCGAGTCCACGGCCGCGCAGGTTCGGGGAGC
AGGTCATACTGACGCAGGAGCAGATCGATGAGTACAAGAGTCAGGCTAACGAGAGCATGG
CGAACGCTTGGCGCATCATCACGCTGCCAAACTGGACGGTGGAGAAGCGAGGGACTGTCA
GGGGAGACGTCGTGGAGTCAAGGAAAGTTGAAGGCTTCGGCAAGGTTTATAGATTTACGG
GCGTCGTCAACTGTCCCGCGAGGTTTCTATACGAGGAGTTCAAGAACAACCTGACGAAGT
TGCCCGAATGGAATCCGACGATATTGAAATGCGAAATAATTAAGGAAATCGGCGATGGCG
TGGACCTGTCGTACCAGGTGACGGCTGGCGGGGGACGAGGCATAATAACCCCTCGCGACT
TCGTGATCCTGCGCCGGACCGCGCTGCTCTCCCGGGAGGGACGCGTCGTCGACGATAATC
CCCACGGATACATCAGTAGCGGAGTCAGCGTTCAAGTTCCCGGGTACCCGCCCCTCAAGG
AGATGGTTAGGGGACACAATAAAGTCGGTTGCTGGTACCTACAGCCTCGGACTGTACATA
CTCCTGGAGGAAAAATCGAGGACCAGGCCCTGTTCCAATGGTTGATGTGTTGTGATCTCA
AAGGTAAAATACCTCAATTCGTGTTGGACGTCGCTTTCGCCACTGTGATGCTGGACTACA
TCGTGCACGTCAGGAAGTTCGTGGCCGAAGCGAAGGCCAGAGCCGAATTCTGACCTTGAA
ACGTCCAAAAGCTGCATCTGTTTACATGCATATTTTGCACTGGTGGTAGGACCTCTTGTG
A
(1681 bp)

- SilkBase 1999-2023 -