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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25466_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_virilizer_isoform_X5_[Bombyx_mori]
Ontology
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007275 P multicellular organism development
GO:0007298 P border follicle cell migration
GO:0007530 P sex determination
GO:0007539 P primary sex determination, soma
GO:0007549 P dosage compensation
GO:0008380 P RNA splicing
GO:0016021 C integral component of membrane
GO:0048024 P regulation of mRNA splicing, via spliceosome
Transcript
Level		FPKM:2.87 TPM:2.66
ORF Entry
Sequence
(Nucleotide)
CGCACGGTACTAATTCATGATCGTGAACATAGTCCTCTCCGCTGGCCGAGGGGATGTTCA
ACCAGTAGCCGGTGGTGAGTCTCTCGTCGGCGGGCTCCCCCGGGCTGTGCACGGTGCGCG
TGGCGAACTGGGCCACCAGGCTGTCGGGCGCCGCGGGCACGGCCTCCGGACCCTCGGGGG
GTGGGGAGCCGCGCTCGGTTAACTTCTGAAGGTGGCCAACAAGGAATTTGACTGCTGTGG
CATCTTCCTCTGCGTTGCGATCCTTCAAAATCTTCTCCAAGCTCATAACCGGATGATCGT
CAGCTCCCACAGAGTACCCCAGCATGTCCGCCATTTCGGCTACAGTCAACACGGACTTCC
TGACCACCGGGCCACCCTCGCCTTCTTCTCCTTTCAATATCCTGATGAGATCTAAGTATA
GGCTCAAGCATTCCGCCCTATCCTCACCGGGTCCGTCCACGGCCCATTTGAAAAATGTCC
CCAGAGCTTCACGTTTTTTTGTCACAAATTTCCTGAACTGTTGAAAACCGTATTCGTGGT
CAGTCAGTACGAAATACGCTCGCAGTATCGACTGCGCCACGGAGCAAGTTTTTGTGCTAG
ACTCCAGACAATCTGCCGAGGCATCGAGGAAAGCTGCCAGCGCTTCCTTGTTTGGTAACG
AATTTGCGAGTAAATTATCCGGGAGGGAGGAGACCGGGGTGAGCGTGATGTCCACGTCGC
AGAGCGCGGCGAGGATGTGCGCGGCGAACTCTTGCGCGGTGGAATGGTCGCCCGCAGCGT
TCGGCAGACTGAGCACTCCGCACAGAGCTGACTGAATCTCTGTCGCTTTGGGTCCGCCGG
TGTTTAGGGCGTGGAGGACGGCACACTTCAGAGGCGCGTGTGACACAAGACATGTCAAAA
ATCCTAGAACCCTGGCCGAGCTCGCGGTGGCGGGTTCTCCCGGCTTGACTTCCCTGGCGA
CGGCGCCCACTGCGGCGTGCGCGACCGTGGCGGCAGTGTTCGGAGCTAGGTCGGCTATCT
GCACGCACACTCGCCTCAGCATGTGGACGACCGGCCGATACGTGGACATGCATATGATCT
GGATCATGTCGGTGAGATCGTTCGACAGCGCGTGCAAATGTGCCGACCACAGCCTTCTCT
CGTTGCAAGCGTCCTCCAGCTCCCGCGGAGTCGGTGGCGTCTTCGCCTGCATCGGTAACG
GTAGCGGCAGCAACTCGGAAAACACCAACAATCCTGGCACGAATGTGTAGGGGGCGGTCA
TGGTGTACTGGATGACTTCGGAGCACAGGGACGTCCACGGCCCTCGTCGGATCGAGTCCC
CGTCGTTCGCATCATCCGCTATCGGCTGGGCGTAGGTCAGCAACGCTTTGACGGCGGCTT
CTGCAGCCTTGGCCGCCGTCCTGTAGCCGACGCAGCCGACCGGGAAGGACTTGGCGATGC
CGTACGTCTTCAGCAGCACAGGAGCCGCCGTCAGGTCTCTGAATCGCGGTCCCCGGCAAC
GAACGACTCTCGCCAACATCTCGTCCAACAACCTCAAGCATGGAACCAATATTTGGGCGA
GCTGTAATCCTTTGACTGAGGCGAAGAATGCGGTGTGCATGCTCGGTTGCTCGAAGCGCG
TGGACAGCCTGCTCAGCACGCCGCCCAGGTGCGCCACGCCGTCCAGGGAGTACAGCTGCA
GCACGTTATACTTGTATTTGAGCTCGACGTACTCCTGCGCGGCCGCCTCGTTGGCAATGG
CGACGTTGGTATCGCGGTCGGAGACACAGAAGTGCCTCAGGACTCGAAGACAAGTTGTGA
GTTCACCGGGCAAGTCGGCCGAATGCTCCGAGTTGGCCTTTAGGATCTCCACGCATTCTG
CCAGGTCGTCCCCGTTCAAGAGGCTCATATTTTCAACCGGTTTCAGATATGGTATCACTT
CTTGAAGAACGCTGGAGACGCTCGGCTCAAATCTGTCGTGATCTTTTGAGACGTTAATGA
GTCTTTGTCCATATTTCTTTAAAAACGTCACATTGGCTGAAAACCGCACTGCCGATACGA
TCAATTCTATGGCATATCCTTTTGCTGGGGACTTTTGTTTAGAAGGTGAATCACTTTTAT
TTTTTCTCGAGTCATTTTCGAAGACTTCCATCAGGCAATCCGCATGGTCGCCCATCACGA
CGACGTCGGACACCGCAGTCCTGCCGATGCAGCCGAAGCTGAGGCAGTATAAGGACTGCA
AGCGATCGATCAGTTCATTTTCGTCGCCTTGACCAGCTTGCAAGTCGCAAATCGATTGCA
AATAATATAAAGCTCTTAATTTATAAGCCATCTCCAGCCCAAGAATTTGCAAATCGGAAT
AATTGCTCAAGTCGTGAGGATACAGAAACTCTTCCACAGTCTGTTGGCTGTAAGGTTGCA
TTAGGGTCTTGAAGAGAAGCTCGCTCAGCTCCATGTTCCTGTACAAGAAGTTCAAGCCGC
TCACTGAATTGACCAACTCGTAAATCAAGTCGTGCACGGGGCTGGCGACCACCAGATTGT
TGCAAGTTTTAGGGCCAGTCAAGAGACACAGACAGACTTCCAGAACGCTGTGGATCCTAA
AGAACTCGAGCAAAGTGTCGTTGCTACACTCCTTGTTGATCTCGAACTGAGCAGACACGG
GCAGGAACCGCTTCGGCTGCGACAGATGGAAGCACTGAGATCGGTACATGTCAATGACTA
TTTCAAAACAGTTTACTATAAACTCAGTGTCAGCTTCGTTGGTTTCTGCATCCGGCTTCT
TGTTGAGATCTGCTACCAAATCGTGAAGTTTTCCCAGCACTTCATATATATTCAGCTTTT
TAATGAGGGCGCTTATTGAAAACTTTAGTCTGGCTAGTGGATCGGCTTGCATCATGGATA
TGAGAGCTCGGTACCCATTTTTGGGTTTTCTCTCCATTTCATTCTTGTCGAATTTGGGGA
ATAGCTTTTCTTTCATGAAATTATCTATTGAGATTTTTGATGACAAGCACGCGTCTAGCG
CCTTGAGGACCATGAGTCGTATACTCAGTGCCATGTACTCCTCAGCGTACAACTGCAGCA
GCAACATGGGCAGGTCTATGTCCGCTGCCAGCAGCTCTCTCGTTACGAGCTCGTTATGTC
TGTGAGCCACCAGGGCCTCGGCCAGGCGGATGCCGCATTTCATGTGCCTTATCTTGTAAG
TGGGCTGCTGTTGAGACAGGGCGTAACCGAAATTCAGACCAATCTTACAAAAAGCAATCA
GTGTTTTGTTAATTTCACCGAATTCGTCGGAAGGAGTTGGATCTTGGAAGATTCTAACTA
CAATATCGGTACTTTTGCAGAGGTTCGTCATTGCGACGTACATCTGTTCGCACTGGTGCA
CCCACTCCTCTCTCATCGTATTATCAATGTCTTTGAACGAATCCGTAAAATATTTCTGGT
CAGTTTTCTTTGATATTTCTAAAACTTTGAAGAGGTCAGGACTGACATCACACAAGTCAT
CGAATTTGGCTGATAGCACGTCTTTTACATCTTCACGTTTGGGCCCTAGATATTGTATTT
TGTTAATATATTCATATTTGCACCACTCCGCTTTGAACGGATTGAAATATTTTATTATGT
CATCGACACCGACATATTCGTTTACGTCATAATCCACCTCCATGTACGAGGTACTTTCAA
GGTCGTCACAAATATCCTCGTCAGACAGAATCGGTTCAAATTGTTCAGCATCGATAGACT
TGACTTCGTCAGTGTTGCCGCTCGGGGTTTCTGGTTTTGGAGGATTATCGACTATCGGGA
CAGTGACAAGGCTTGAATGAGTCTCCACGAAAGGAGCAGCGTGTTCTTGAGAAGGGCTCC
TTATAGGAGGCTTGTGACGGTAGCTCTGATGGTAGAAGTCTACTCTGGGTATTTGCTTTC
CACTTCTCTCATAATCGTCTTCAGATCTGACGGAATGTATGGGACTAGTTGTTTCTCCAT
CTCGTGGTGAGAGTGGTCGACGACTTTCTCCCGGTGGAGTCCTAGGCCGTTTCCTTGGGT
CATCGCGACTCGGCGATCTACTTCCGTAGCTAGAACTTCTAATTCGACCATAAGGAGACA
ATCGCTTACGTTCGTAAGGTGGCTGCTTTTCGTAAGACGGTGCTCGTCTTTCATAGGAAG
CGCCACGCTTGTACGGCGATGATCTTTTATCATAACCTATCTTTCTCTCGTATGACGGTG
CTCGTTTGTCGTATGGAGATCGACGTTCATAAGACCCGGCTTCTTTATCATAAGAAGTCC
TCTCGTACGACGGTTCGCGGTGGCGCCTGTATTCATCCTTCTTATACGAGGCCCTGTCCC
AGTCGCGCTCAGTGGAGTGAGGCCGCACCCTGTCTGCGCTGCGTGATCTGGAGCGACTGC
GAGTGCGATACTCGCCCTGCACGATATACTCTCGTTCCCGACTTCTGGTTCTCGACCGAT
GTCGTTCCATTCTATCATCTCTGTGCCTTGACGAGTCTCGACTGCGCCGGTCCATTGACC
TTCTTCGACCGTGCCCTTGCCTATCCCTATCGCGCTCCATGGACCTTGAACTACGTCGCA
ATCTATCGCCTTCACCATCACAGTTGATATCTCTATTCTTTTCCCAATCACCTTCCACAT
GATAAGTCCTAGGATCTTTCGGAGGCTCGTTTTCATAATATTCATTTCGATAAATTGGAT
TTTCATAATTTTCTGGATAGGTATTAGGAGTATAGACATCGGGGTTGGTGCTGGCGACAT
TACCAGTGTATGATGGTATTGGATTGGTTGGCTCTGGATTCCAGTCAGGTGGTTGTGTCA
CATTTGCTGGTGGCGCATCTCGGTTGACTGCGGGTCTTTGAATAGTGGGAGGGGGATTGA
TACCAACTGGTGTTTCTGGTAATATCTGGGTGAGCGTCCCGTAAACAGCAAGAGTGATGG
TAGTGTAACATCCTCTTAATACAAGGCCATCAGTAGGGATCCTAGGATGGTCACCATCAG
CTCCACACTCCATATGAATCTGTCCATTTTGACAGTAGTCCAAACTACCCAAAGCTTCGA
AAGTGGAAGCTCCAGGCTTACTCAGGTCATTCACGAAAAAGTCGATATGAAACTTCGTAG
GGTTTGTGGCGCCTAACCGAACTCGACCGGGAAAGTCTCCTTCAACTCGGGCACCCAATG
GAATAACACGTATTTCTCTTACATAGACAGACTTTGGAAACTGTACTAAATCCAGATTCA
ATTCCTCGCTTGTGTCGTGTGAGAACGTATCAAAGAATAATAGATCGGGTTTCTCCGAGT
TCGACATTGTATTGTTTAATTTATATTAGTAATTTCTATTCACATGAATTTACTAATATT
TTAGAATTAGA
(5351 bp)

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