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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25452_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_RNF13_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031902 C late endosome membrane
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:9.77 TPM:9.04
ORF Entry
Sequence
(Nucleotide)
GCGAGTAAATGAGTGAAGTGATTCATTTCAGTCGTAGTTTAATTATCGAAATTAGGCTTT
CATATCAACAATAAGCCTATTCTTGTTGTTAAGCTAGTTATAAAGCTGTAATTCTTAATA
CCGAGTTTTTGTAATATTCCGCAAATGCAATTCTAAATTTACATTTTGCGACGGGATTAT
AAAGTATTTTTAGTTTCTGTTTGTATGTAATATTTTCATCTTGTGCTTTGTGCGAACGAC
TATATTATTGTTGTCGTTACACACGTGATTCGAGGACGAGGCTTGTTTATACAAATCAAA
TTAATTTAAATAAGTTAATTTAAAATGAACATTTGTGAAATGATAGTTTATTGAATACTA
ACAGTGTGCTTTTGATTACGAAACATTTTATCAACACACTTCCTTTTGTGCCTAGAACAA
TGTCCTCTCGTCGTCCGAAGACTTCAATAAGAGTATGATCGACGAATTCGGGGTGCAAGA
ATAACATGAACTGAACTAAAATGCTGTCCAGAGTCATAATAGTACTATGCGGCCTCTTCA
CGGCGGTCTGCTGCAACATCATTGTTTACACGCAGACGATACCACATGCGATAATGGAGG
AATTCCGCGACATCCCGGCTAGTTTCGGCGAGGAACTGCCGCCGGAGGGTCTGCGCGGAC
TCCTGGTCGAGGGCGTCCCGGCTGACGGATGCACGGCCTTGGATAAACCGCCCGTTGTCG
ACAGCTTTACCGGGAAATGGATCGTGCTCGTAGCCAGATACAATTGCAGCTTCGAAATGA
AGATACGCAACGCGCAGGCGGCCGGCTTCGATTGCGCGATCGTGCACAACGTGAACTCGA
GCGATTTGGAGAAGATGTCAGCTAAGAATCCGGAGGGCATCGTGATACCTTCAGTGTTCG
TCAGTGACGTGGCCGGCGACATACTGGCAGCGGAATATCAATATAATGCCGGTTTCTTTA
TAATGGTGAACGGCGACCTACCGTTCAACATCAACACGCACCTGCTGTTGCCCTTCGCAA
TAGTGGTCGTGCTCTGTCTACTCGTCATATTTATATTTATGATAGTGAAATGTATAAAAG
ACAGGCGCAGAGCCAGAAGGCACCGCTTACCGCATCGTGCGCTTTCAAAGATACCGAC
(1138 bp)

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