SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25449_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_B_member_8,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0002481 P antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0002485 P antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0002489 P antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0002591 P positive regulation of antigen processing and presentation of peptide antigen via MHC class I
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:1.31 TPM:1.22
ORF Entry
Sequence
(Nucleotide)
CGCCGAAAGGCGAGTCCCCTGAGTGGGATTTATACCCCCTGCGCTGTACTTGCCAGCAGT
GATTTGCAGGGGGGGGATGCCTATGCCGTGAAAACGGCAGTCAGCTGGGATTGGGGTGGA
GAGTTTGGGAAGGTGGGGACCCCACTGGGTTGTGAGTGCCACAACAAGCGGTGATCGCAG
CGGGGTTTTTAGTCTTTAAAAAGACTGTTTTGCACGACGGATAGATAAATAAATTTAATA
ATGAAATGAGTGAATGAATGTGAATTTGGCGTTTTCGAATGCAGAACAAACGAATTCGAA
ATGTTTTTTCGACCCAAGGTCGCTACGCCAGCGCCCGTGCGTCAGGAATTCACAACAAAG
TCGCGATCGACGCGACAGCGACAATGTCGTGTAATCCAAAACACAAGTTCGCGACGGCAG
CGACAATAATTCGAGAAAACACGTCCGGACTCGACAGCGTTGCAAACGGAATTGAATTTT
ACTTCTAAACGATTTACCGACCCTTCAAAGCTGACGCATGGTTGCTACGCAGCAAAAATA
GACAAGGTGGTGGTACCTACCCGCACGGGCCTACAATACCCTCGGCCAGCTTCAATTTTA
GTAATATAACTTACCCCGGTTCCCTAGATGTGTGTTAATGAATTTCTGAATTACATACTA
TCTCTTTGGATATTGTTCATATCAGTAAAATCATGAATGATGAATCATGATGAAATTCTT
TGCTTATCTCACTAATTGATATGAATGCATTATTGCAATCTACTATCTACTACCCATAGA
CGGTTTCGTTTGATAATCGTGACGTCATCACTATTATCATTTATTTTATTGTCAAACTTA
TGTTTTTTCTATGTGTGTTTTTGAGAATTCTACACAAGTGTAAATCTATTTTTAAATTTT
ACCCTCATCTTAGCAGTGAATACAGAGTTAATGAACATCAGATCCTAAGCGGTCCCAACC
GCTTTGAGACATGAGGTCGTAGTCACATGAGGACAGCAGCCACCCTGCCCGACCAACTGT
AACACAATCCCATCATCTCGATTGTTCTTGATCTTGATCCTGTTGCTTTATAAGATTCCA
ATAAAAACCCTTCAATTTCTTCAATTGTTCATGGTTTCCCATCTCAACAATCTTCCCCTT
GTTCAATACGACGATCAGATCGGCATTGATGACCGTGGATAGCCTGTGGGCTATCACCAG
CACGGTCCGACCCTTGGCCGCCGTCTCCAGCGCCTTCTGTACGACCTTCTCGCTCGCGGA
ATCAAGAGCGCTGGTGGCCTCGTCCAGTATTATAACCGGTGGATTCTTCAGCACAGCTCT
GGCGATGGCGACCCGCTGCTTCTGTCCCCCGCTCAGAGCCATCCCCCTCTCGCCGACCAG
AGTGTCGTACCCCTCCGGGAACGATTGTATGAACTCATGAGCATTGGCTATCGTAGCCGC
CTGCATCACCTCAGCATCAGTGGCCTCCGGTCTCCCGTACCGAATGTTCTCTCGGACCGT
GGTGGCGAACAGGACCGGCTCCTGGCCGATCAGACCTAGCGCCCTCCCACGGAGCCACTT
GCCGTCGAAATCGCGCACGTCAACGCCATCTATCGACACTTGACCTTCGTTCACGTCGTA
GAACCTTTCTAACAGCGCAGCGATAGTAGACTTCCCGTTGCCAGATGTGCCGACTATGGC
GACCGTCTTGCCAGCAGGTATTTTAAGATTGAAATCCTTCAATATCACAGCCTCCGGTCT
CGTGGGATAGGCGAAAGTGACGTTCTTAAACTCGATGTCGCCGTGAAACTCGTGGTACTT
TATACACTTAGTACCGGACGTATCCATTGCGGGTTTCTTATTGATGTTCTCGAACACCCG
ACCGCCGGCGCTGATCCCCTTAACGACGGAGCCGAATAGCAGAGACAGCTGCGCCACCGA
GCGCTGCACCGTCTGCGCGTTGACCAGGAACGCCATCACGTCTCCCGCCGACATCTGCCC
GGTCGACATCAGGTGACCGCCGAGGAACATAGTGCCGAGCACCATTCCATTCAAGAACAA
GTTAGTCCCGGCCTGAAACAATCCGATGCCGAGTCCCAGCTCCATGCTGAGCTGGGCGGC
CTCGTCACACTCCTTGGCAAACATCTGCGCCTCGCTGTCTTCGGCGGCGAAGGCTCGAAC
CGTCCGCATGTTGGAGAGTGCTTCCTCCGCCACTAATGTCGCCTTTTCTATCTGAGTTTG
AGCTTCTCTGGACAATTTCCTCAACAGCGAACCAATGAAGGTGCCTCCGATAACAACTGA
CGGGACGCAGATCATCGTCAGCCCTGTCAAATGTGGGGATATGACTAAGAGGCTCACCGC
AGAACCCACCACCTGTGTAATAGCTCTAAGACCTCCCGATATGGTCTGTTTGAAAGAGCT
TTTGAAGTCTTGTACGTCCACTGTTAACCTATTAACTAATTCCCCAGTTCTTTCTTTATC
AAAAAATTCTATATCCTGTCTTAGAATAGATACAAATAGGTCTTGTTTCATTTGAGTGGC
CACTTTTTCTCCCACTTGTGACAGCAAGTGAATGTAGAAAAACGTAAAGGCTGCCTGTCC
AACATACAGTGAAATCAATTTAAATGCCGGCATCTTGATCTCGTCAATGAAATCAGCAGC
CGGATTATTCCTTATTCCTGCTAGAACATTCACGATGACACCGAGCATAGCTGGGATGTA
CACATTTAGGAATGCCACAGCTAACGCAGAACCAACAGCAGCTATAAGGAGCCATTTATG
AGGTTTTAAATAGTTCAATAATTTTTCCCAATCAAATTTAGCTGTATCCTCTTGGAAATT
CGGCCTTCTCTGTATTACTCTCGAAGTCTGAACTGCTTTACAAAATACTGGATTCCTATA
TAGAAAATACCGAGCGCCAATAGCTAAACTAACTCCTGTACACAATTTCCATGGACTGCA
AGGCAATGATTCTCCAGACTTTGAACTTTTTCCACGAGTCTTTAACTGTGATATATATCG
ATTTAAAGCGTCTGATGGCTTGTTTTTTACTATATTAGTGAAGTATTTATTACTTTTTGA
AGCCAGGAACCTTTGTCTTGTGAGACAACATAGGTGATTCTGTAACATATACCACATTTT
ATAAAACTATTTGATATTTCTTAGCCTATAATGAATTAATAATACATGATTAGGTTTTAT
TCTAAATAAATTAAATTAATAAAGATCTTGATCTTAGTTAAAAAATA
(3227 bp)

- SilkBase 1999-2023 -