SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25448_c3_seq5
Scaffold_id
NCBI non-redundant
(nr)		hepatocyte_nuclear_factor_4_isoform_a_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008270 F zinc ion binding
GO:0008610 P lipid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0016042 P lipid catabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0034440 P lipid oxidation
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.32 TPM:3.07
ORF Entry
Sequence
(Nucleotide)
ATTTTATTTTGATAGAACTGAGGCAAAGAAACGACATTTACATTTAGGTCTATGCTAAAT
GCTATTAGAAGGAGTCTTTACGTCCGACAAAGTTTGTCGATTGTCGTTTCACTGAAAACA
AATATTTCATTTAATTTGGCAAGGAATTCTATAGTGACTACGGTTCGCTAGTTTCGCACG
CGATGACGTCATATCGAGTTTCGCACGCGCTGACGTCACGTCGAGTTTAGCACGCGATGA
CGTCACATCCAGTTTGGACTTAGTAACTGTCAGTACAGGGTCGGGTCAAGCGGTCTCATA
TCTCTGATGTACCAGGCGGGCTTTAGTTTAAACACATTTTGATATCGCATCAGAAAACTT
ATTGTTTAGATGTTGGGCTCTTGTTTGAAGGGCATCGGTTCGAGGAAGGCGGAGTCGTTG
CCCGGCAGCTGCGGCAGTTGCGGCACTAGCGGCACCAGCGGCACTAGCGGCGGAGAGGGG
GACGCGGCCGCCGGCTCCGGGGACGGCTCCTCCAGGACGGCTTCTGTTGTGGCCCCGCCG
AGCAGCATCTCCTGCAGCAGGCTGTCGACGTGCGCGACCCCGAACAGCTTCGCGAACTGG
ATCTGCTCGATCATCTGCCACGTGATGCTCTGCAGCGGCGGCAGGCACAGCAGCAGCTCC
CCGAACCGCCCGCGCCCGTCGTACTGCCGGTCGCTGATGTAGTCCTCCAGGTTGATCTGG
ATCTGGTAGCGGAGCTGCTTGATCTTCTGCGGCTGGGACAGGCCTTTCGCGTTTGGATCG
AAGAACACGATAGCTTTCAAACATGCGAATTCAGTGTCGTCTATGTCAATCTCTCGTAGC
GGCTTCACTATCTCGTCCATGACGCGCATGCCTATCATGCTAATGTCAATGTCCATACGA
CCATCGATGTTGTGCTTCGTGATGATGCAGTTGTTCCCGAGCAGCAGTATGTCCTTGAGG
TGCAGCGAGCGACGCGCGCAGCCCAGCAGCAGGTGTTCGCCGGCGTGAGCACGCAGCAAC
GCCACCTGATCGTCGAGGTGTAGCTCCGTGAAGGCGGGTATGTATTTAGCCCATTCCACC
AGTATGAGTAGTTGCTGTTTTATCGAATCGCATACATCGTTGATCTTTGCTAGCTTCCTA
TTGTTTATTTCGGCGTCGCTCACGTTTACAGTCTCGTCAATGACTTTCCTGCTGAGGAGT
TCTGCGTTGAGGAGCGATACAACAGATAGACCGTTGGCCTGCGTCGGTTCTTCGTAAGAC
GGTCGCCTGCAGTTGATCCTGTCCCTTTCGTTCTGAACAGCTTCTTTTTTCATGCCGGCT
TTGAAGCACTTCCTTAATCTACAATATCTGCATTGGTTCCTTTTGTCTTTGTCGACTACA
CAGTTCCTGCTGAAACGGCATGTATATAAATGGTTCTTCCTCACGCTCCGTCTGAAGAAT
CCTTTGCATCCGTCACAGGACGAGGCACCGTAATGCTTGCCCGTCGCCCTGTCCCCGCAG
ATGGCGCAATGCTGGGATATGGTCGTGGAACTGGCTGCGCTTGCCTCGCTACTGCTCGTC
TCCAACTGCATATCACTATCCAGTATTTGCAGAAAGCTGTCCTCGAGTCTCATCGTGGAA
GAGAGAAGGTAGTCCGTCCCCTCCAATTCGCTGGGTGCCAACACGTCGCTCCTCATTTTT
ACACTTTAACTTCAAACTGATAACAAAATACTTTCCGTGCTCTTAGAACAGAGGCATACT
TCGGTATTCCGTTAATTTTCCACTAAGACACAGGCTCTAGTTCACTTGCATAAAAAGAAT
TGCATCACAGTACCACTGAAAAGTTCAAAAATAGGGACTGGTTATTTTAAGCCGCGATAT
TATGGTGAATGACTTTGAAGTCAGTTCGCTTAGAGGTCTCGTAATTATGTGTTGTTCGCG
TAAACTGTATAAACAAGCGAGAGCCGGTTTATTGGTGTTTCACGTGTATAATTTAAAACG
ATAATGTATTCGTAGATAGCGGGCTCGTGTGGGGCGAGTTGACTGTGCGCAGGCCGCGGC
ACAACTCGCACCGCGCGCCCGCCATCAGCTGATCCACTATAAATAATATGGGAATTAAAA
TAAATGCAGTGGAACTGCGATTGATCGTTACGTGAACTGCACCGGGGCAACTGATTGTTG
CATCTCAATAATAAAAGATTGCGCGTCAACGTCTTCTCCGTAGTCCAAGTCGTCATACGT
GAGTTCTTCATCGACAGCATTAATCGAAGTTTCTTTCCCACCCGGGCAGGCAAGACACCT
GGAAAGCCCACAGACGTCCTACTAACCCACGGCTGGACCCAGACCCAAACCTCGCTACAA
CGACCGATCCTGCCGATTCCCGCGACCTGACAAGACGTCATTCGACCTTGTAGAAGATCT
ACCCAAAAATATTTTTTATTGCTTAGGTGGGTGTCAGTCTCAGTGGAGTTACAACGACTG
CCCCAACTTTCAAACCGAAACGCATTACTG
(2490 bp)

- SilkBase 1999-2023 -