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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25448_c3_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_transcription_factor_HNF-4_homolog_isoform_X1_[Amyelois_transitella]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003707 F steroid hormone receptor activity
GO:0004879 F nuclear receptor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006629 P lipid metabolic process
GO:0007492 P endoderm development
GO:0007498 P mesoderm development
GO:0008270 F zinc ion binding
GO:0008610 P lipid biosynthetic process
GO:0010906 P regulation of glucose metabolic process
GO:0016042 P lipid catabolic process
GO:0030522 P intracellular receptor signaling pathway
GO:0034440 P lipid oxidation
GO:0043401 P steroid hormone mediated signaling pathway
GO:0043565 F sequence-specific DNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.95 TPM:2.73
ORF Entry
Sequence
(Nucleotide)
ATTTTATTTTGATAGAACTGAGGCAAAGAAACGACATTTACATTTAGGTCTATGCTAAAT
GCTATTAGAAGGAGTCTTTACGTCCGACAAAGTTTGTCGATTGTCGTTTCACTGAAAACA
AATATTTCATTTAATTTGGCAAGGAATTCTATAGTGACTACGGTTCGCTAGTTTCGCACG
CGATGACGTCATATCGAGTTTCGCACGCGCTGACGTCACGTCGAGTTTAGCACGCGATGA
CGTCACATCCAGTTTGGACTTAGTAACTGTCAGTACAGGGTCGGGTCAAGCGGTCTCATA
TCTCTGATGTACCAGGCGGGCTTTAGTTTAAACACATTTTGATATCGCATCAGAAAACTT
ATTGTTTAGATGTTGGGCTCTTGTTTGAAGGGCATCGGTTCGAGGAAGGCGGAGTCGTTG
CCCGGCAGCTGCGGCAGTTGCGGCACTAGCGGCACCAGCGGCACTAGCGGCGGAGAGGGG
GACGCGGCCGCCGGCTCCGGGGACGGCTCCTCCAGGACGGCTTCTGTTGTGGCCCCGCCG
AGCAGCATCTCCTGCAGCAGGCTGTCGACGTGCGCGACCCCGAACAGCTTCGCGAACTGG
ATCTGCTCGATCATCTGCCACGTGATGCTCTGCAGCGGCGGCAGGCACAGCAGCAGCTCC
CCGAACCGCCCGCGCCCGTCGTACTGCCGGTCGCTGATGTAGTCCTCCAGGTTGATCTGG
ATCTGGTAGCGGAGCTGCTTGATCTTCTGCGGCTGGGACAGGCCTTTCGCGTTTGGATCG
AAGAACACGATAGCTTTCAAACATGCGAATTCAGTGTCGTCTATGTCAATCTCTCGTAGC
GGCTTCACTATCTCGTCCATGACGCGCATGCCTATCATGCTAATGTCAATGTCCATACGA
CCATCGATGTTGTGCTTCGTGATGATGCAGTTGTTCCCGAGCAGCAGTATGTCCTTGAGG
TGCAGCGAGCGACGCGCGCAGCCCAGCAGCAGGTGTTCGCCGGCGTGAGCACGCAGCAAC
GCCACCTGATCGTCGAGGTGTAGCTCCGTGAAGGCGGGTATGTATTTAGCCCATTCCACC
AGTATGAGTAGTTGCTGTTTTATCGAATCGCATACATCGTTGATCTTTGCTAGCTTCCTA
TTGTTTATTTCGGCGTCGCTCACGTTTACAGTCTCGTCAATGACTTTCCTGCTGAGGAGT
TCTGCGTTGAGGAGCGATACAACAGATAGACCGTTGGCCTGCGTCGGTTCTTCGTAAGAC
GGTCGCCTGCAGTTGATCCTGTCCCTTTCGTTCTGAACAGCTTCTTTTTTCATGCCGGCT
TTGAAGCACTTCCTTAATCTACAATATCTGCATTGGTTCCTTTTGTCTTTGTCGACTACA
CAGTTCCTGCTGAAACGGCATGTATATAAATGGTTCTTCCTCACGCTCCGTCTGAAGAAT
CCTTTGCATCCGTCACAGGACGAGGCACCGTAATGCTTGCCCGTCGCCCTGTCCCCGCAG
ATGGCGCAATGCTGGGATATGGTCGTGGAACTGGCTGCGCTTGCCTCGCTACTGCTCGTC
TCCAACTGCATATCACTATCTTCGCTGTTGTATGTCACGTTGATCCCGCGGTGGTCTGCT
CCTCCGCTTCTGGACTGGAAGTCGCTGTAGGGAGCGTTGTGCTGCTTCTCCCACACGTGG
GCCGGGACCATGTACTCCGACGCAGCACTGTATCCCATCGGGCAAATTTCTTGAGACGTC
ATTATCTCGTAGCCCAGCACCGGCATTTTATAAACCCCGCACACCGCGAAGGTAACTTCA
ACTATTATCGGTTTTCAATCACAATTCATCAATCGAGGGCGCTATTTTTATCAAAACTAA
ACAATAATTGTTCCAAAGTGTTCGAAAGGCAAAATAAGAAAAATTCCGTAACAGACCTAA
CACTTATCAGCGACATAACACCGATGACAGTTTGTAAACAATCACGACAATGATTAGTAA
GTCACAGAATGTATTTACGCGTTGATTAAAGACGCTTACTTAAACCTTCCGGGTAATGTT
TCAATATTGATCATAACAAATATCCACTGACAACGGTTGATAACGGTTATGCGAGGTCGA
GGTCGGATTCCGAAAGCGACCTTACCGGCGCGAGATGCGACTAAGACTGCCGGACGAGCA
CTGCGATGTCAAGCGCGTGCTTCATTGCGACCCGCTGTCAATACGATTAGCGGTCACAAC
ATGAAGCACGCGCTTG
(2236 bp)

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