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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25441_c5_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_DENN_domain-containing_protein_1B-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006897 P endocytosis
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017112 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0017137 F small GTPase binding
GO:0030054 C cell junction
GO:0030136 C clathrin-coated vesicle
GO:0030425 C dendrite
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032266 F phosphatidylinositol-3-phosphate binding
GO:0032456 P endocytic recycling
GO:0032483 P regulation of Rab protein signal transduction
GO:0042734 C presynaptic membrane
GO:0043025 C neuronal cell body
GO:0043547 P positive regulation of GTPase activity
GO:0045202 C synapse
GO:0048488 P synaptic vesicle endocytosis
GO:1901981 F phosphatidylinositol phosphate binding
Transcript
Level		FPKM:3.16 TPM:2.93
ORF Entry
Sequence
(Nucleotide)
AAAGAAGTTTCACTTCTTTCACGAGCACCACGTTGCACACGTACAATTTTTTTTTTTTAC
TAATCGGTAATTTTTTTCATTCTATAATAAACTATATAGTAAATAATTAAGTATCAGTAT
TCAATGCCGCAAGGAGAAGCAATGTGTTTTTTTTATTTTTTTTTATTCGTTCATGTCTTT
TTTACCTTGAGAAAGTCCGACACGTTGAATTTTGTCTTTGAACATGTACTGCACGGTCAA
GTGCAGCGCGCAACAGACAAGCGAACCTATTCCGTATATACGGAACGTGATCCAGCCTTG
ATAGTGATGGTACAATTGTCCGCCTATGAAACTACCAAGAGAAGCGCCAACGCCCTCGAA
AACGGCACCGACGAGGCCCTGTATGGTAGTTTCTGTGCCCGGTGGTGATACAATACTAGC
ATATGACGTCATGGTCGGGTAGAACATCCCAAAAGTGATACCCTGAAGCATCTCAATTGG
TAGGATCCACCAGGCGTTCGTTAGAAACGAGTATAGTATGAATCTAACACCGAAGGCGAA
CAAAACCAGACTCATCATCTTCACGTGTCCGACTTTCTTCAAGATATAACCTGACACGAA
CAAGAAAGGTATCTCGCCGAAGAACGTTTGGATCGCGCTTACCAAGCCCTGCAGTGTTTT
TATGTACATAACACTGTCGCAAGATAAACGCGAAACGTCTTCGAGGAGCCAAAACAGAAA
GTTCCACAATAATCCCGTGCACAATCCCACCGCCACCGTCCACATCATGAATACGAAAGT
GGGTAGCGAGGTCAGAAGGGTTCCGACGTCACCCAAGATGTTCAACGACATCTTTGTCGA
GTCGGTCTTCAAAAAGCACGAAACGATGACGTCTCCCATCATAAATACAAACATCAGCAC
GAACGCCACCGTGTAATCCTTGTACGCGCCGTCGCTGAATGTGTCGATGAGAAAACCAGT
TAGGAACGAGAATATACCCCAACCTACCGAGCCCCATAGCCTCTGTTTTCCGTATTGGGC
GACTTCGGTGCCGAGTAAATTGAAACAAATAGCATCAGCGAAAGTCACAACGACGGCCTG
TCCCACCCAACTAATGATCATAAACATGAAAAACATCCAAAACTGACTTGTGAACTGTGA
GCTCTCCTCAACTTCAGTACTCTCTTGAGATTCTTCGAATATCTCATTTACCATAGTGTT
ATCGCAGTTCATTTCGCAATTGGACTCGAACAACTTATCTTTGACGGTTTTGAAGAAAGC
GCCACCTTCTTTCTTGACCGTCTTGGCCCAATCTCTGTACTGTTGCTTTAGTTTCTGACC
ACTACCCGTGTTCAATTTATCCGCGTACGCGTTGCATTCTACTTCGAACTCATCGTTGAA
ACCTCGTCCGGAATTGAGCAAATCCAATCTTTCGTCTATAAACTGTTGGAATATTTGGGA
TTGTAGTATTTTTCTAAGGAATGGTTGCATGTTTTTCCTCGTTTTCACAAAAGCTTCTGG
ATTGAATGTAATCAGTTGACCATTTTCAATCTTGATCGCATCGCGGTACCCGCCGATTAA
ACAGACAAGGGCGCGTAAAAATGCTCTTGAAACAGCATCTCCAAGAGCGTTTTTGTCGCT
CAAAGCCTTCTTTAAACTCGAAATCAACTCAGGGGGAAGAGTCTCCAAGTCATTGAAAGG
AGATCTAAGCTCATTCGCGTCTACATCTAAAATCACAACGTCACCTATCTCAGACATCCT
AACATTCTCCATAACGCTTCTAGGAACTCCAATCAGAAATGGCATCGGCGCCAGCATGTA
ATCGACCAAATGCTTCGGTAATATTGGAATGAAAATATGTTGCCATGACATCGGGAACAG
AGTCGCGTTAGCCGCTTGGACACAAGCCGACAGACGCGATGGTTTCGATGCTACGATGGC
CACTCGACGTTCGTGTAACAATGCTGCCCACAGACCCGCCATGCATTTTGTATCGACCGC
ACTGAAGTATTCTGTTAGGTTGCAATTGTCTGGGATACTTGGCAGCTTGTTGCTGTCAGG
GCACTGACAAGTAAATACACTGTGACCGGCATTGTATATAACCTTGAGAGTATGTCCCGG
CATTGGAGGTCGTATCCGACACGCTTCCAGGAATGAATGTAGTTGATCCCGCTCCGGACT
GTTTATTATATTCGCTATGCAATTTAATAATTTGTAAAATATATCATGCCAAGGCAGATG
TGATAAGATCACTAGAGCAGTGTTGGCTTTAGGGTCATATCGGCAAAAACAAAATGTATA
CTTGGAATCCATTGATGTCAACACAAATGAATAGTGTTGAGCAAAAGAGTTTTCTAATGA
ACACGGAAAGGTAAATTTTGGAATACTCTTAATCTCTTCTTCATTTCTATATGATTCTGG
GTACTTGAATAATACATATGGTTCCTTTAAATGATCACCAGGTGATACTTCACAGAATAA
CTCAAATAAAAATTTAACAGTTTCTCTTACTCTGGAACCCATGTCTCGACGTGGACTGGA
AATTTTGATTACATTTTAAGAAATAAACTGACAACAACTTGTTTGAAAATTCACTTATCA
TGAAACATCGCAAGCCATAG
(2600 bp)

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