SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25427_c10_seq2
Scaffold_id
NCBI non-redundant
(nr)		Retrovirus-related_Pol_polyprotein_from_transposon_TNT_1-94_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:2.34 TPM:2.17
ORF Entry
Sequence
(Nucleotide)
AATGAAGAACACGAGCTCTCTGGGTGCGTGGCTTGTTTAAAGGGCAAGCAAGTCTCAAAA
CCTTATCCCTCTGGTGAAGCCAAGCGTGCCACTAGTCGATTAGAGCTCATTCACTCCGAC
ATCTGTGGACCGATGCCGATTAAAAGTTGGGGCGGTGCAAAGTACATGCTGACCTTAACA
GATGACTACAGTAGGCAGAGTTGGGTGTATCTTCTACAAGAAAAAAAAACAGGTAATGTC
CCGTTTTATTGATTTTAAAAACGTTGTTGAGAAACAGACCGGAGCCAACATAAAATGTTT
ACGAACCGATGGAGGCGGTGAATATTGTAATGATTGTTTCAAATCTTTCCTTAAGTCTCG
GGGAATTATTCATCAAATAACCGTTCCATATTGCCCTCAACAGAACGGAGTATCTGAGAG
GCTAAATAGGACTTTGTTAGAGAAAGCAAGATGCATGCTGCAGGAATCTGGTCTTAGCCG
GGAATATTGGGGAGAAGCGGTCATGACGGCCCTTTATTTAAAGAATAGAAGCCCTACAGT
TGCCCTTGCTGGACTGATGCCTGAACAAGTGTGGACTGGTTCAGATGTAGACCTTAGTCA
CCTTAGAGTTTTTGGCTGCATTGCATACGCATTAATCCCTGAACAGAAACGTTCAAAATT
AGACCCTAAATCTAAAAGATATATTTTTGTTGGCTACAGTGATTCAACTAAAGGCTATAG
GTTGATAGATCCACAAAATCCAAGACGAATTTTTTATGCTAGGAATGTGACTTTTTTCGA
GCACAAGTTTTTGAAGGACACGGATGATAATCCTTGTGTTCATTGTAAAAGTAAAAACAC
TGCTAATCACTTTGTTGATGTATCTAGTCAGAGTGATATTAATACTACCATACTTTCAGG
TGCGGACTCGGAGTACTGTACTGGAGACGAGGGAGCAGAGACCGCTGCTAGTCCAAATCA
TGCAGACTTGGACTGCAGCTCGTCAGTGCATGACCCGTCGTTACGTCAAGGGGAAGCGGT
GTCTAGTGCCGGCCTTCAGGATCCTGGTTTGGTAACTGATACTACGCGTCCTGTACGTAG
TACTCGTGGAAAGCCTCCACTCAGGTATGGAGATTATGTACTCTCTCTACTGGTTCACAA
CGAGATAGAGCCTCTTTCTTATAAAGAGGCTATATCGTCGCCGGACAAGGAAGAATGGCA
ACGTGCAATGGAAAAGGAGTATAATGCTCTCCTCAAAAATGCTGTCTGGAAACTGGTGGA
TCGACCACAGAATAAAAATATAATAAAATGTAAGTGGGTTTACAAGGTCAGACAAAACTG
CGAAGGTAAGGATAAATTTAGAGCTCGTTTGGTGGCGCGCGGGTTTTCTCAGAAGCAAGG
CGTCGACTATAGTGATACTTTTTCACCTGTCGTGAGACACAGTACACTTAGAACTTTGTT
CGCTTTAGCTAATGAATATGATTTAGATATCAGTCATTTTGATGTAGAGACCGCGTTTCT
AAATAGTAATCTAAACGAGCATATCTTCATGGAACTACCGGAAGGTTTTAATTCAGATGA
TGATAATAAAGTATGTTACTTATTAAAAAGCATATATGGCCTCAAGCAAGCTAGTCGAAT
GTGGAATCAAAAAGTGCATCAGCTGTTATCTAATAATGGTTTTAAACAGAGCAAATGTGA
ACCTTGCGTCTATATAAATAAGAATGATAAAAGTTTAACCATAATAGCCTTATATGTAGA
TGACTTCTATGTTCTAGGAAATTGCTCTATAATTAAAAATAAATTGTTAAAATTACTGCA
ACAGGAATTTACTGTTAAAGATCTGGGTATTCTAAAAACATGTTTGGGTATTGATGTCTT
TCGTAACAAATCTAAAGGTATTTTAACTCTGAATCAAAAAGGTTATATAGAGAAACTTTT
GTTGCGTTTTGGAATGGAAAAGTGTAATCCAGTCTCAACTCCGATGATGCTTAACAATAA
ATTAGATAAAGTGAATGGTGATTGTCTAGATGAAAATGTGTACCCATATAGGGAGTTAAT
TGGAAGTCTAATGTACCTCGCTGTATGTACTCGACCTGACATAGCTTTTGTATGTAGCCA
GCTAAGTCAGTTCTGTTGTGGCTTCAATATGTCTCATTGGCTTGCGGCTAAACGTGTTTT
AAGGTATTTAGCGGGAACCTTGAATTATGGCTTATGTTTTTATAAGACTAGTAACTTAAA
TATAACTGCATATACTGACGCCGACTGGGCTAACGATATTGTAGACAGAAAGTCATATAC
AGGGTTTATAATAAAGCTCGGGAATAACACTATAAATTGGGAAGCACGTAAACAGAAATG
TGTGGCTCTATCAAGCACAGAGGCTGAATACTTAGCAATTTGTGATGTGTAAAGACTTGC
GTTTTGTTAAAAATTTTCTGAATGAAATAATTGATAAATCACCTTCTATTGTAGTGTATA
ACGATAATCAGAGTGCACAAAAGCTGTTAGAATGTAAAGAGTATTGCCACAACCGAACAA
AGCACATTGATCTAAGGTACCATTACATAAAAGACTTAATAAATACAGGTTTTGCTGGTG
TTAAGTATTTATCAACACAAGAAATGGTGGCAGATATATTAACTAAGCCTTTAAGTTCCA
TGAAGCATAAACATTTTATAAATGGGATAAATGTTAAAGATGTAGAGACTTTCTACAAAC
TGTAACATGCTATATATGTGCATGTTTATTTTCTGTTTGAAACTATGTTAATATTATTAT
AATTTTTTGTTTGAAGAATGTAATGAATAAGGGGAAGTGTTAGAAATATTATTTACTCTA
TTCATTCCATTATAAGTATAAATTGGCTGTATGAGCTAAAAGGCATGAGCCTTACATAAT
GTTAAATTTATTGAGAATAGCTGTCACTTCCTTCGCTGTGTTTTTGTGGCTCGGTGTGTG
AATTTTTTCTAATCTATAATTATATTGATAATCATAATAAATGTAAAGCATTTTCGCATT
GGTTTATAAATAAATTGTCATTAAATATTATAGCGTGTTAGTTTTCTTGTAACGGTCTGC
ACACTCGCCCGTTCCCGAACAAACTTGAACAAGCTGCCAGCTCATAGGTACGCTATACCT
ATGTTAACAGGTTATGGGCCCAGAGAGCTTAAATTAGAACAAAGGGCAGAGGAAGAGAGT
GTGCGGATTATCACGCTATTCACAAAATGCCAACGTCATCGTCATTTGGTACTGAGCAGT
CGACCCCTCAAACGGGCAACGGCGCCGGGCCTATATCAATTGAGAGATTACATGGTTCGT
CAAACTATGTATCTTGGAAATTCTCGATGCGCATGCTGTTAACCTTAGAAAATATTTGGA
GCTGTGTGGAATCAAGGGATAAATCAGCTACTACAGACACTCAACGTGACCAGAGAGCAT
TAGCAAGAATTTGTCTTGGTGTGGAGCCTGCATTGTACCAGTATGTTCGCGACGCCAGAA
CTGCCAGTGATGCTTGGAAGAACTTAGCCAAGGTATTCGAGGATCGTGGACTATACAGGC
GAGTACTCTTACTCCGGCAACTTCACCATATAGAATACAAAAATTATTCTAACATGCAAG
AATACATCAATGCTATTATGACCCTAGTGTCACAGTTAGCGGATATAGGAAGGAGCATCG
AAGACGACGAGGTAGCGGAGATTTTACTGTCTGGTCTTCCAAGCGAATACGATGCTTTGG
TCAGCAATTTGGAAACTGCATGTATTAGTACTACAACTCTTTCGAGCGAGCTTGTTAGAA
CACGCCTACTGCAAGAAGAAAT
(3802 bp)

- SilkBase 1999-2023 -