SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25424_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		Leucine-rich_transmembrane_protein_[Operophtera_brumata]
Ontology
GO:0004860 F protein kinase inhibitor activity
GO:0005509 F calcium ion binding
GO:0005518 F collagen binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005737 C cytoplasm
GO:0006469 P negative regulation of protein kinase activity
GO:0019221 P cytokine-mediated signaling pathway
GO:0030282 P bone mineralization
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031012 C extracellular matrix
GO:0031214 P biomineral tissue development
GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT
GO:0070171 P negative regulation of tooth mineralization
Transcript
Level		FPKM:14.56 TPM:13.48
ORF Entry
Sequence
(Nucleotide)
TCGTGCATGCATTCTTATCTAAACTTAATTTAAAAAAAATCCTTTAATACTCTAACAATC
ACTCGAACACACAACAAATGAACATACAAAAGAGTTTTTACACTAAAATAAAGCTATTAT
ACACGTGTAGGCACTTAAAATAAAACTAACAAAACCAAATATTCATATAAAAACTTTTAC
AACACATTGAAGGACATGGAACATGTCAAGAATTCGACGATCACATTATACTCTATACAT
ATTCATTGATCTAATGTTTCTATAATTTAAATTAATTTTATTACGTTCTTCGCTGACAGA
AATCAATTATCGAATGAAAATGAAGATAAACAAATAACACATCAGGTTATATGAATTTCG
ACGGTTCGCCTGACAGATCGTCGATCGTTCACTCTTGGCCTGTGCTCCGTAAGATCACCA
ATAGATCTTGACCTCCGAGAACGTTGACTAGGTTCATCGTCCACAAAATCGGGCAGTGAA
TGGAATGACGAATTCAACCGTGGCATCAACAGAGCCTCGTCATAAGTCGGAGGCAGGTCC
TCGTCACGCAGAGGCACTCTCATCACTACCGACTCGGCCCGCGATTGTGGCGTTCCGTTG
AGATTCACAATAGTCGTCTCAGTTTCAGGGCTCGGAGGATCCGGTTTGTTTATAGCAATT
ATGCCCCGACAAATTAACGATGTCAGCACTATACCAATGATAATACCGACCATAGCTGCC
AGTGTCGTATAAGATTCAACTGTAGACGCGTTGGGGTGCCATGTTTGTATGTACGCCTGT
TGCCAACTAAGCTGAGTCACGTTCGATGGCGTGTAGCAAATCAGGGAAGCTCTATCGTGA
ATTTTCGAAGGTTCTTTCGTGAGGAACTCGTAAGTGAGCAAAAGATTGACGCTGAAGCCT
TCGCAGTTCCATCGGTTTCCCTTCACGTGGACTTCCCTCAGAAATGGATTCGAGGCGAAG
TGTGAGGTGGACCAAACCTCCCTGAACTCGTTCCCTCTCAAGTTCAATACCGCTAAGTGG
GGTAGTGACGAGAACGTGCGGTCAGTTAACGAGCCAATTTCATTATAGCTCAAGTCTAAT
TCCTGGAGAGTGTTGGACGAAACATTATCTGGTATGCTTTCAATTTGGTTCGAAGATAGG
TCGATTTCGAGCAGCGAAGTCATTTCTGACAGAGAATCGACCTGTAAGTTTGTGATCAAA
CAATAGCTTAGATGAAGACTCCTCAGGGAATTCGATTGAAATTTCGGTAATTCAGACAAA
TAGTTTCGACTTAATCTGAGTGTGTTCAAACTTTTTGCGGCCGTAAGGAGTTTCGGAGAG
AACTCGTTTATTCTATTCTCAGAGAGATCTAAGAAATACAAATTGGTCATTCCACTGAAC
GAATCTTCTTCAATGTTTTTTATTTTGTTCCTCGACAGATCCAGTCTTCTGAATTTGTAT
TGGCGGCCATCGTTTAGCCAACTTTCGTAATTGTTGTTCGATAAATTAAGCGTGTTTAGG
CTGGTCCAGTTTTCTATGTAGCTGGGCAACGGCACGTTCAAATGGTTACCGGATAGATCT
AATACTTGCACGCGCGAGAAGCTTTCCAATTGCGACGGAAACGTTGCGAAGTTGTTGTTC
GTCAAAATGAGCACTTGTGACTCATAGTTCAAGCCTTCTGGTAGTTCACTAAGCCCTCTC
TCGTTGCAGTCGAGATAGATTAGTCCGTCTAGGGTATAAGTACTGCAGGGCATTTCCTCT
TGCTCATCAGTCGTTCGGCGCACCAATCCACCAGTCACCATCCCGGGCAAAAGCCAGAGC
AGTAGTCTGGTTCTGAAAACTCCGAAATCCATGAGTGCGAATGGCGTTCACATGTTACAG
AATTTCCACGTACAATATTGAACTGAATACTAAACAGCACCAGAATATTACTATAGATCG
ATTGATGCCAACATACTGACCGTTGAAATATATTTAAAATATATGTTTTTTTTTACAAAT
TCTCTTGCACGTATGCGAGCGATGGGATAGATAGTGCAAGCTCCCGG
(2027 bp)

- SilkBase 1999-2023 -