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Last updated: 2022/11/18
NameA_BomaMG_comp25390_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_tRNA-splicing_ligase_RtcB_homolog_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
GO:2000237 P positive regulation of tRNA processing
Transcript
Level
FPKM:14.49 TPM:13.42
ORF Entry
Sequence
(Nucleotide)
TCAGGGGGGAGTTGCAGATGGAAATCGATGGAAGACAGTTGAAAGTACGGGAAAAACTTG
CGTGAGCCTCTAAACTTCCGGTTCTACTCTTAAATTATGGTTACAACAGTGAATTCGATT
AATACAGAAATTAACGGTGAATTGTCGCGTTCGTGCCCGTCAAAGAAAACCAAAATGGAA
AACAAAGTAACTGTTGTTTTGGGTGCTCAGTGGGGCGATGAGGGCAAAGGAAAAGTTGTA
GATTTACTTGCGGTGGATTCCGACATTGTTTGCCGTTGTCAGGGCGGGAACAACGCTGGA
CACACAGTGGTAGTTGACGGCAAAGAATTTGACTTCCATCTGTTGCCAAGTGGCATCATC
AACCAGAAGTGTACGTCTGTCATAGGTAATGGCGTGGTGATCCACCTGCCCGGACTGTTT
GAGGAGCTGAAGAAGAACGAGCTGAAAGGCATGAAGGGTTGCGAAGGCAGACTCGTGATC
TCGGACAGGGCTCATCTTGTTTTCGATATACATCAACAGGTCGACGGTCTCCAGGAAGCG
GAGAAGGGTAAGAACTCGCTCGGCACCACAAAAAAGGGCATCGGGCCGGCCTACTCCGCG
AAGGCAACCAGAAACGGCATCAGAATCGGCGATCTGCTCGGAGACTTCAATCTGTTCGAA
GACAAATACCGGACCCTTGTGGCCTCGTACAAACGCATGTTCCCGGCATTGGAGTTGAAC
ATCGATAGCGAGCTGTCGAAGTACCGAGCGTACGCCGATCTGGTCCGGCCGATGGTCAAG
GATACGGTCTCGTACCTGCACAGGGAGATCGGCTCCGGGAGGAAGGTGCTAGTCGAGGGA
GCGAATGCCGCCATGCTGGACATAGATTTCGGTACCTATCCGTACGTGACGTCATCGAAT
TGCAGCATAGGCGGCGTGTTGACCGGTCTCGGCCTACCCCCCAACGTGATCGGGAACGTT
CTGGGCGTCGTGAAGGCGTACACGACGCGCGTGGGCGACGGACCCTTCCCGACGGAGCTG
CACGATGAAACTGGTCAGCTACTTCAGGAGCGAGGGCACGAGGTCGGCGTCACCACCAGG
CGCGTCCGGCGCTGCGGCTGGCTCGACCTGGTCGTCGTCCGCTACACCGCCATGGTCAAC
GGGTACACGTCATTGTGCCTAACAAAACTGGATATTTTGGATACCCTGAAGGAAATAAAA
GTCGGTGTCGCTTACAAACTGAATGGCAAGAAGATTGATTATTTCCCGTCTTCGATGGTG
GAACTTAGTAATGTAGAGGTGGAATACATTAGTTTATCCGGTTGGGCGTGCAGTATAGAG
CACGTGCGAGAGCTGGACAAGCTGCCGGCGGAGGCCCGCGCCTACGTGAAGGCCATCGAG
GACTTCCTGCAGGTGCCCGTTAAATACATTGGCGTGGGTCAAGGACGGGAGTCGATAATC
AGCGTCGACTAACATCGCGTCCCGGCATCGCGTCTTCGCGTCGCTACTTAGTTTCATTAT
TGTAACTGTTAATTTTATCTGCAAGTCGACATGCGCACGCGCCGGCTTGCTGATTCAACG
CTCTACGTGTCCGGTCGGTCGATGATTTAGTATTTTACCTTGTATGTTCGTATTAAACTG
CATATGGCAACGTTCATAGATTAATTAGAAATGAGCGCGCTTTAACCCTTTGACTGTCGT
GTAGGTCACCGGTGACCAACGCGGCGCTTTAAAGTAAGTACGTCGACTTCTGTTACTAAG
GCGCTGAAATATCTAGTAGACTCTGGGTAAGACGAATCCGAAGATAAAGAGCGTGAAAAT
ATTACTAAGAGATCTAAAATGCTAAAACGTACATTATTTTTTTATTGCATAAATGGGTGG
ACGAGCTCACAGCCTTCCTGGTGTTAAGTGGTTACCGGAGTCCATAGACATCTATAACGT
AAATGCCGCCACCCACCTAGAGATATGAGTTCTAAGGTCTGGTATAGTTAATCGTACCGT
AATATTTCAGATTAATGTTTTAACATTTGTATTTGTGGTTTTGACATGAATGAAATAGAA
ATACTGCATGTTTTAAACACAATGAAATTTTATTAATAAGAATAAATTTTTCATAGTGCT
TATTTCAACTGTTTCATTGTTGTACTTTACAAATTCTTCACAAGTTTTTAGGAAATCCAT
TACATGTTATTATAGTATAATTAGATAATTTATTCAATATATTAACTGTCTTAACAGTTC
TTAGAAAGAATGATTATTTAAAAATCACATTAAGAAAGGGACTTCATCCTTTTATAACAG
CAATTGGTCTTAATTTAACAGTTTTTTTGCTAATACCAGCAGCATGACATGTATCTACAA
CATCTGTTACATTCTTGTATGACTCTGGTGCCTCTTCCATTACTAGTTTTGGAGATGCAA
CTCTAATGGAAATACCCATAGTTTCAAGTTTGTTTAGAACTTCTTTGTAGTCTATGTTTC
TTCTAGACTTGGCTCTAGACAGAGCTCGACCAGCACCATGGCATGTGGATCCAAACGTTT
CTGTCATTCCTTGATGAGTACCAGTTAGTACATAACTGCAGGTTCCCATTGTACCACCAA
TAAGTACAGGCTGACCAGTTAGTTGATAATCCACAGGTATTAATGGATGATTTGGTGGGA
ATGCTCTAGTTGAGCCCTTCCTATGTACTAGTAGAGTTTTCAATTTCCCATCTACTACAT
GTTCTTCAACCTTGGCAATATTATGAGACACATCATATATGACATGCATGTCAAGATCAT
CAGGTGCCATTTTAAATTGCTTTGCAAAAGCTTGACGGGTCAAGAATGTCATTGAGCTAC
GGTTCACCCAAGCAAAATTGGCAGCAGCAGACATAGCTTTAAGATAATCTTGACCTTCAA
CAGATTTTATCCTGGCACATGCAAGTTGTCTATCATTAGTTTCTATGTTATCTCTCTTCA
TAGCTTTCTCCATTTGCACTAAAGCATCAGTTGCTACTTGATGCCCAAAACCACGACTTC
CAGAGTGAATCATCACACAAACTTGACCAATACTTTCAATACCCATTTTTCCAGCAGCAT
ATTTATCAAATATTTCATCAACAACTTGAATCTCTGCATAATGATTTCCAGCTCCTAGTG
TGCCCAGTTGAGGTAGACCTCTTTTCTTTGCTCTGAGACTGACTTTTGATGGATCAGCAT
TCAACATTCTTCCATATTCTTCACAGTGTTCCTTATCTTCGGCCCAAACATAACCTTCCC
TTAGAGACCAGTCCATACCCATTTCCAATGCTTCTTCCAAATCACGTGCATTCATTGGAA
TAATACCCTTGGAGCCAACTCCAACAGGTATATGGTCAAACAAGCTCTGAGCTAATTGTT
CCTTAATAGGTAGAACATCCTTCTCATGTAAATTTGTTCTCAATAAACGAACACCACAGT
TTATATCGAATCCTACGCCTCCTGGAGATACTATAGATTTGGGATCATCCATATCAAAAG
CTGCCATATTTCCTATAGCGAACCCATATCCAGAATGAACATCAGGCAATCCCACTGACC
GGCCTACAATTCCCGGTAAAGCTGCAACATTAGCTATCTGTTTTACACCAGGAAGGAATC
CACCTGACATACCAGGTCTACAACAATTCCTAAGCTCCTCCAACATTAGTTTCTCAAGTG
TACTGTTAACGTAAAACACTCCTTCAACATTCATATTTGGTTGGAAGCCTTTTTTAATTC
TCCAACAATATGGATTAATTTTTTCCAAATATTTAAGTTCTTCATTATACTGCCTTACAA
CCATTATTTTGCACTACTTGTGTATCGAAAAGGTGTGTTAATGCTATTTAAACCTACTGG
ATAGGTTTGAAAAACGTAGGTAAATGGCAATTGAAAACTTAGTTGAAAATTGAAAGAAGC
GTTCAGAGAAGTGCAAGCTCGAAT
(3924 bp)

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