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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25385_c4_seq8
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_Nedd-4_isoform_X2_[Bombyx_mori]
Ontology
GO:0002092 P positive regulation of receptor internalization
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0016199 P axon midline choice point recognition
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017022 F myosin binding
GO:0019904 F protein domain specific binding
GO:0031623 P receptor internalization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0051965 P positive regulation of synapse assembly
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:4.34 TPM:4.02
ORF Entry
Sequence
(Nucleotide)
CGGGGGGCGCGGGGGACGGGGACGAGCTCGGAGCCCTGCCCGAGGGCTGGGAGGAGCGCG
TCCACACCGACGGCAGGATATTCTTCATCGACCACAATACGCGTACCACACAATGGGAGG
ACCCTCGTCTCTCCAACCCTCAAATCGCTGGACCGGCCGTGCCTTACTCGAGAGATTACA
AACGGAAATACGAATACCTTAAGAGTCAACTTCGTAAGCCTAACAACGTGCCAAACAAGT
TCGAGATAAAAGTGCGTCGGAACTCGATATTGGAAGACTCGTACCGCATCATCAGTTCGG
TCAGCCGCCTGGATCTGCTCAAGACTAAGCTGTGGGTCGAGTTCGAATCCGAAGTGGGGC
TAGACTACGGCGGCCTCGCCCGCGAGTGGTTCTTCCTGCTGTCGAAGGAGATGTTCAACC
CGTACTACGGCCTGTTTGAGTACTCCGCCATGGACAACTACACGCTGCAGATCAACCCGA
ACAGCGGCGTGTGCAACGAGGAGCACCTCAACTACTTCAAGTTCATCGGCCGCGTGGCGG
GCATGGCCGTGTACCACGGGAAGCTCCTGGATGCGTTCTTCATTCGACCGTTCTACAAGA
TGATGCTGGGTAAAGCCATCGATCTACACGACATGGAGTCCGTGGACTTGGAATACTACA
ACTCTCTGATGTGGATCAAGGAGAACGACCCGTCGGAGCTGTACCTGACGTTCGCTGTGG
ACGAGGAGCAGTTCGGCAAAACCGTGCAGAGGGAGCTGAAGCCGGGCGGCTCCAACATAC
CCATTGACAACGAAAACAAACTGGAGTACATCAAGCTAGTGATAGAATGGCGGTTCGTGA
GTCGAGTCGTGGAGCAGATGGTCGCCTTCCTGGACGGGTTCGGGGCGCTGGTGCCTCTGC
CCCTGCTGAAGATCTTCGACGAGCACGAGCTGGAGCTGCTGCTGTGCGGCATCCAGCACA
TCGACGTCCGAGACTGGCGCGCCAACACGCTGTACAAGGGAGACTACCACGCCAACCACC
TCGTCGTGCAGTGGTTCTGGAGGGTGGTGCTGTCGTTCTCCAACGAGATGCGGTCGCGGC
TGCTGCAGTTCGTGACGGGCACGTCGCGGGTGCCCATGAACGGCTTCAAGGAGCTGTACG
GCTCCAACGGGCCCCAGCTCTTCACCATCGAGAAGTGGGGCTCGCCCGAGAACTACCCGC
GCGCGCACACCTGTTTCAACCGTATCGATCTACCGCCGTACGAGAGCTACCAGCAGCTCA
GGGAGAAGCTGATCAAGGCCATCGAGGGCTCGCAAGGGTTCGCCGGAGTCGACTGAACGA
CGTCGCCAAACCGAGACCCTGATCAACTAACAAAAGACAAGAACTCCTGAAGGGCATGAC
TTAGGTTGTGTTCAGGGTACAAGCGAGACGAACCCGGGCCAATGAACGTGCTACAAATAT
TAATTACTTTTATTTACACCGTCTGGTGTTCTTTCAAAATGAATTAATTACCTTTGTTTC
GATTCAACGCAAAATATAATATTTTATTTGTTCTCATAACACTTGTGTACTTAAGTGTAC
TTAAGTGCAAACCTCAAAGCGTATCTACATTTAGAAGACATTTCGATCTCGGGACGTGCG
CGGGACATTCGTGACGGAACACAAAATTCATTTTTAGAACTACCGTTTGAGTAGATGCAT
CAGTGCTCGCGCGAGGACATTGACCCCACTCTTTTTATGACGTCACCCTAAAAATTAAAC
ATCTGTTTGTATTGCATTTAATGTCATTGCGCGAGCACTATGACCGAGCTATGTTCACGA
AGCGGTAAAAAGCAATAAGCTAAAATCTGAGTATGTGTTCTTAAAAACCTTTCGCATGTC
CACTTCAAGTCTATAGTATAGTATGCTTCATAATTAACATTTATCAATAAAAAATATTTG
TAACTCTATAAAAGATATGGATTCGCATTTCTATATTGCGACGAATTTTGTGCGGTTGTT
ACACACGTGCACTGTATCGTGTAGCAATAAGACTTAAATTTAAATATAACAAGATTCTGT
TATGTTGGCCATAATCAGAAATTGAGGGGACAAATTAAGTAAGGAGTTTAGTCGTCAACG
AATTTCTGTGAGCAATAGTAACTCCGGCGCTAGTTATTGCCATAAAAAAGTTTTGTTTTT
TTATTTACGTTCCTTAGAGTTTTTAATGCACTCCCATACTTTACAAATAGTATCTAAATT
TATTTAAAAATAATAATAATTATTTATATACATAAATTCCCTTGCAGTATCGAAATGTAA
CGCATAGTTGAATTGTCCAGAACGAATTTTCATTAATTAACCAACTTAAATTACCGCGCT
TTTACTCTGCGAACGTGTTTGACATTTCGAGGGAGCTGTCACTGTCACAAGTGTCAAAAC
AGAAAAGTCATAAAAATAAACGCGGGAATCCTATTTATTATTTTATGTGGCTCTGTGGAG
GCGACAATGTGGTTTTTTTTTACGTTTATTACTCCAATAAGTATTGGTAAAAGACGTTCC
TTGTGGTAGGTACATACATGAGTGGTGTATTACCAGAGTAATGACATTCAGGTAAGCCGT
GACACGTGACATGGGAATTAAAAAATATTATTAATCGCAAAAGTAAATTTTGATTTTATT
TAGTAACTGTAAAAAAAAGCAGATTGTCCGCCATAAGTTGATTCGTGGAAGTTTTAATTT
TTATTCTAAATTTATGAATTGTAAAAAATCTATACATCTATATGCATAGACGAGAAAGCA
ATACTAGAAATTACTATATTATAGTAGTGGCGACGCGAATATGTCGCTTACAAATGAATT
ATTGTATAGATATAAACGCGTTTATTTTAGTAATAATTACGAAAACGAGTGCCTATTGTT
TCCTCTAAAATATATATACTATATATGAAAAATAAAATCGTATATGTAGATTATATTATG
TATATAATTAAAGTTCGTTATAAGGAATTTAATTTAAATTAAAATAAAAAAAACAATACA
ATCACGTAGTCAATTTTGATTGTTGTCAAATTACTAATTTAAAATTGCGATCAAATTAAC
TGCTTGAACAAGTAATTGGAAATATCCCGCGTATTTTTCATATTTTAATTCAAGATGGTA
GCGTACCGTCTTCTTCTACTGTGCAGTTACCTTGCGTTCCTATTTGAAGGGATATGTCTG
TAGCCGTCACGCACTTGAGACACCGAGCTCAAGTCTCAAGACGGCGGCATTCACGTTAAA
ATATCAACGGGTCCCGGTGACAACTTACAGCCTAGTGGGTCGTGATCATTGAGACTAACA
ATAGAAACGTTCTAGATAGGATGGTAGTAAACGAGATGATGGGGGCATCTCAAACAATTC
CTCAAAGCACTCCCCATATACGATGGTGGTACATCTGATGGTGAGCCATTCACATCAACG
TATACGTCAGCAACGCCGAAGGAAACTTCTAGATTCTTTTTGGCTCCTGCCAAGTAAGCA
CTCGGTGACATCAGTGTGCTTAGTGCGAGTTTCTCAAGGTTCTCGATAGCGTAAAAGTTA
AGTCAAATTTGTATGGAGCTGGAACAGTGCCCCTAGCGGC
(3580 bp)

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