SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25377_c18_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_SH3_domain-containing_kinase-binding_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042981 P regulation of apoptotic process
GO:0043005 C neuron projection
GO:0045202 C synapse
Transcript
Level		FPKM:2.72 TPM:2.52
ORF Entry
Sequence
(Nucleotide)
GTCAAAAACAGTGAGCCTTTGCTTTCCACACGCTTGTATACGATATTAATTTGTGAATCG
TTTCTTGTTATTTCGTGATCAGAATTGAAATGTGCTATTTGTGGATCAATGAAATAAAAA
ATACGTGATGTTGTGATTAGTGTTCAATGCCGGCAATGGAGACAAATCTATCACAAAAAG
TGTCTTGCACCGTTAACTTCGCATATGATGCATCAGAAGCGGACGAGCTGACGATCAGAC
CGGGGGACGTGATACGCGACGTTGAAAGATTGCCCGGGGGCTGGTGGCGAGGCGAGTTAC
GTGGAAACCGCGGCATGTTCCCGGACAACTTCGTTTCTCTTCTAAACGAACATGCTACTA
CGAGATCAACGGGCGTGCAAGGGCGGTGTCGGGCTCTGTACAGCTATCAACCAGTCAATC
CGGATGAATTGGAACTCTGCGTCGGCGACGTGCTTGAAGTTCTAGGAGAGGTAGAGGAGG
GCTGGTGGCAAGGTCGACGCCAGGGTCGCGTGGGTGTGTTTCCATCTAACTTTGTTGTGA
TGCTCGACCCACCGCAGCCGGCACCCTTCGAACTCGCTCCAGCGCTCCCACCGAAGCCAG
TAAAGGAGCAATGTCGGGTGTTGTTCACTTATGCTGCCGTGAACGACGATGAGCTGAACC
TCAACGAAGGCGACATCGTTACTGTTATATCAAAGGAAGCCCCCGACCGAGGCTGGTGGC
GGGGAGAACTGCACGGTCGCGTCGGGCTCTTCCCCGATAACTTTGTACAGTTGTTGCCTG
CCGCCACAGCAGATGTTGAAGAGAAGAAACCCGAACGTCCATCAAAAGCCGCGACCAACT
CGATTTATCCCATACTCAATAAATACACAGAAAAAACCGCCTCGGTCAAGGAGTTGACTA
CGTCTAAGATAAGCATGCACAAAGACAACCCTCTCAGCAAAGAGACTAGCACACATAGTA
CAGTCACGCACACAAGTAAGAATGAAACTGAGAAATTTATTCACAACGAAGCATCTACAG
ACGGAAGTATCGACGGCCAGGTAAAGAAACCGCCGGTGCCGTTAAAGAAAAGTCCGACGC
CCGTATCCGGAGTCGGAGGATTGCTCAGCGGACTGAAGAATAAAATGCTGTCATCGTCTG
ACAAAGAAAAATCGACGCCTGTTATTGTGGATTCGGACCGACCGGACGGCGCTACGTCCA
GCAAGCCAACACCCAACGCCAACGCAGCAACCACGACCAACGCCAATACGACCAACGCCA
ACACGCCCAACATCAACGCACCCAACATCAACGCACCCAACAATAGCACGTTCGACAATA
TCGAACGTAACTCCATACTCAACGATCCTCGAGCGGGCAGAGTCAAAGCACCAAGACGAC
GGCCACCTAGTCAGGTCCTACGCGACGACACGCCGCAGCAAATAGGACTTAGCAACGGAC
ACGAAGTACCGGCGAGCGAAAAGCCTCCGCCGGAGAAAGCGGAAGAGATAAAACCGCGCG
CTCGCGAGTGGGAGAAGCACAAGGCTCCCTGGATGGAGGAGTTGAAGCTGAACCAGGCGA
AGAAGACCAGCTTCGCGGCGGACGGCAAGGCGCGGTCCGTCTCTAGCTCGGCAGAGAGCA
GCGCGCTGGCCAGCAGGGCGGGCGGCGGGAGCACCGACAGAATCCTGGAATGCGGTTTGG
ACGAGAAGAGATCAACGCATTCTATGGAAATGTCGAAGAGCACCTCATCCATCACCAGTC
GAATGTGCGTTCTAGAAAGTTTCGAAGAGACAAAGGTACGTCACTCGTTGGATTCTAAAA
AGGAAACGCCCGATAGGAGTACCCCTGATCCGGTGCCTGTCATTAAACCGGTCATGCACT
CCCCCACCGCCGCAGGTCGAACATTTTTATCGATGGTTGACGATGTGAAGAAACCTCCCG
CCCCCGCCCCGCCCGCCGCACCCACCGACAAGGCACCCAGCACCAAACACGACAAGCACG
TTACAGATAAAATCGAAATTAATTCTACGAAGACATCCAGTGTGTTCGAGAAGTCTAGTA
CGGTCGAGAGAGTGGAACGGATCGAGGAGAGGTCGCCCGAGAAGCCGGTGGCCGCAGTCG
GAGGTGACAGGACCAGCGCGTCCAGTACTCTCGAGCGGAGGCCGCAGCCCGGCAGGGGGG
AGAAGGCGCCCCCGGCAGATGGAACCGACGCGCTCATTGCGCAGCTCAACTACAGGATAT
CGAACCTCGAGAAACTAATAGAAGTACAGAACAGCATGTTCAAGGCGTCTATTGAGGAGC
TGAACGCGAAATTGAAACTTGAATCCGAGAAACGACAAGCTCTTCAGACCGAAATAGAGA
AACTTGCACACTGCGTGACGCAAGTGTAGTGAGTGGCGTTATCCTGAAGTTGAAGTATCG
TTCAAATTGAATCCTGTAAGATTGAGGTATTTTCCACAGCGGCGCAATTGATTGTAGGAC
GGAATTTGCTGTCGTAAAATACAAATCGAAACTAGGCGTAGATTTTTATTTATTGCCATT
GTAAGCAGACGAGCATAACCACCTACCGGTGAGTGGTTAGTGTCGCCCATGGACCTCAGC
AACGCCTCTGGTCAGAGCCAAGCCGCTGTCTACCGCATAATACAAACGAAATTCTTGTTA
GATATTATGTCTTCGAAGTGTTTCAAAAGTGACTTTTATTAAATAATATCTGGTCCCACA
GTCGCATTTAGTCTAGTAAATATTGAATTGTAGTCGCCGTGGCTGGTTTTGCGGGTTCTG
TAGAAGCGAACGCGTTTACATATACGGTAGGCATAGATCGGAAATAGTTCAATACATTTT
CACCTGAAACATGTTGCGTGAATCATTCATTCTAGCGTCCTAAATAAAAGTTTACAAATC
ATATAAACGTTTTAGCTAGAAAAATATGATCTAGATTTTTTAGTCTAAAATAAAACATAG
ATTTTTTGAATTAAAGAGATTGTAGTCAATAATAGGAACGTCAATAAACTCTCGACGTCG
AATAGCTAAAAAAAAATTAGTAAAAAAGGAACCTGATCGTTAGTGGATAAATAAAACTAA
CAAATGGGCGATTGTGTTCAAGTAATTTTACAAAAAAATAAAAAATAAAGTTTAGCGAAC
GTCTACTCTATTCTAATTCTGTTCGCAGAGTAAATACAATTATAACTTTATTACTATTGT
CCAAAACCTCCGCGTAGACCGGTGTAATGTACAATTTGGTTGCTTTGATAGATCGGAATT
ACACTGGATATTTATCTGGATTTATTACGTCGGAATAGAGTCAATATATAGCACAAATAA
AATTTCAACAGATTTTTATTACGCTGCATTAGGTTTGGTAATTTCTAATGGATCTAATTA
TGCCTCTGAGTATATTTGCAAAAATGTGTAAAGTGATAAATCAGTGTTTTTGTAAAAAAA
ATTTTTACCTATTTTATTATTCACAATATGTACCTCTATTCCTACTTTGTGTAATTTATG
GTGAATCTGATAAAACATCAGTGACTTATATCGTTCTTTTAAATCGACTTAATGCAGTGT
CATAAGTTGATAATATTAATCCTTTGAGCGCAAACCATCGATAGATCGACTTATTCATGC
GTAGAAAGTGCGGAGCGTTGGATTAGCGACTATTGTGCAGTTTGATTATTGGTGTTATAT
CCACTATCGACCTGTACGGACGTGTCTT
(3688 bp)

- SilkBase 1999-2023 -