SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25377_c18_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_SH3_domain-containing_kinase-binding_protein_1_isoform_X2_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042981 P regulation of apoptotic process
GO:0043005 C neuron projection
GO:0045202 C synapse
Transcript
Level		FPKM:4.71 TPM:4.36
ORF Entry
Sequence
(Nucleotide)
GTGACCCTTAGTAAATACATACTGTGTTATACTACAGTGTAAAACGTGTCATATGGTTTG
GAAGAAAATAGTAAAAACACGCGGCTCCTTCAGATTCTGGAGATCAACGGGCGTGCAAGG
GCGGTGTCGGGCTCTGTACAGCTATCAACCAGTCAATCCGGATGAATTGGAACTCTGCGT
CGGCGACGTGCTTGAAGTTCTAGGAGAGGTAGAGGAGGGCTGGTGGCAAGGTCGACGCCA
GGGTCGCGTGGGTGTGTTTCCATCTAACTTTGTTGTGATGCTCGACCCACCGCAGCCGGC
ACCCTTCGAACTCGCTCCAGCGCTCCCACCGAAGCCAGTAAAGGAGCAATGTCGGGTGTT
GTTCACTTATGCTGCCGTGAACGACGATGAGCTGAACCTCAACGAAGGCGACATCGTTAC
TGTTATATCAAAGGAAGCCCCCGACCGAGGCTGGTGGCGGGGAGAACTGCACGGTCGCGT
CGGGCTCTTCCCCGATAACTTTGTACAGTTGTTGCCTGCCGCCACAGCAGATGTTGAAGA
GAAGAAACCCGAACGTCCATCAAAAGCCGCGACCAACTCGATTTATCCCATACTCAATAA
ATACACAGAAAAAACCGCCTCGGTCAAGGAGTTGACTACGTCTAAGATAAGCATGCACAA
AGACAACCCTCTCAGCAAAGAGACTAGCACACATAGTACAGTCACGCACACAAGTAAGAA
TGAAACTGAGAAATTTATTCACAACGAAGCATCTACAGACGGAAGTATCGACGGCCAGGT
AAAGAAACCGCCGGTGCCGTTAAAGAAAAGTCCGACGCCCGTATCCGGAGTCGGAGGATT
GCTCAGCGGACTGAAGAATAAAATGCTGTCATCGTCTGACAAAGAAAAATCGACGCCTGT
TATTGTGGATTCGGACCGACCGGACGGCGCTACGTCCAGCAAGCCAACACCCAACGCCAA
CGCAGCAACCACGACCAACGCCAATACGACCAACGCCAACACGCCCAACATCAACGCACC
CAACATCAACGCACCCAACAATAGCACGTTCGACAATATCGAACGTAACTCCATACTCAA
CGATCCTCGAGCGGGCAGAGTCAAAGCACCAAGACGACGGCCACCTAGTCAGGTCCTACG
CGACGACACGCCGCAGCAAATAGGACTTAGCAACGGACACGAAGTACCGGCGAGCGAAAA
GCCTCCGCCGGAGAAAGCGGAAGAGATAAAACCGCGCGCTCGCGAGTGGGAGAAGCACAA
GGCTCCCTGGATGGAGGAGTTGAAGCTGAACCAGGCGAAGAAGACCAGCTTCGCGGCGGA
CGGCAAGGCGCGGTCCGTCTCTAGCTCGGCAGAGAGCAGCGCGCTGGCCAGCAGGGCGGG
CGGCGGGAGCACCGACAGAATCCTGGAATGCGGTTTGGACGAGAAGAGATCAACGCATTC
TATGGAAATGTCGAAGAGCACCTCATCCATCACCAGTCGAATGTGCGTTCTAGAAAGTTT
CGAAGAGACAAAGGTACGTCACTCGTTGGATTCTAAAAAGGAAACGCCCGATAGGAGTAC
CCCTGATCCGGTGCCTGTCATTAAACCGGTCATGCACTCCCCCACCGCCGCAGGTCGAAC
ATTTTTATCGATGGTTGACGATGTGAAGAAACCTCCCGCCCCCGCCCCGCCCGCCGCACC
CACCGACAAGGCACCCAGCACCAAACACGACAAGCACGTTACAGATAAAATCGAAATTAA
TTCTACGAAGACATCCAGTGTGTTCGAGAAGTCTAGTACGGTCGAGAGAGTGGAACGGAT
CGAGGAGAGGTCGCCCGAGAAGCCGGTGGCCGCAGTCGGAGGTGACAGGACCAGCGCGTC
CAGTACTCTCGAGCGGAGGCCGCAGCCCGGCAGGGGGGAGAAGGCGCCCCCGGCAGATGG
AACCGACGCGCTCATTGCGCAGCTCAACTACAGGATATCGAACCTCGAGAAACTAATAGA
AGTACAGAACAGCATGTTCAAGGCGTCTATTGAGGAGCTGAACGCGAAATTGAAACTTGA
ATCCGAGAAACGACAAGCTCTTCAGACCGAAATAGAGAAACTTGCACACTGCGTGACGCA
AGTGTAGTGAGTGGCGTTATCCTGAAGTTGAAGTATCGTTCAAATTGAATCCTGTAAGAT
TGAGGTATTTTCCACAGCGGCGCAATTGATTGTAGGACGGAATTTGCTGTCGTAAAATAC
AAATCGAAACTAGGCGTAGATTTTTATTTATTGCCATTGTAAGCAGACGAGCATAACCAC
CTACCGGTGAGTGGTTAGTGTCGCCCATGGACCTCAGCAACGCCTCTGGTCAGAGCCAAG
CCGCTGTCTACCGCATAATACAAACGAAATTCTTGTTAGATATTATGTCTTCGAAGTGTT
TCAAAAGTGACTTTTATTAAATAATATCTGGTCCCACAGTCGCATTTAGTCTAGTAAATA
TTGAATTGTAGTCGCCGTGGCTGGTTTTGCGGGTTCTGTAGAAGCGAACGCGTTTACATA
TACGGTAGGCATAGATCGGAAATAGTTCAATACATTTTCACCTGAAACATGTTGCGTGAA
TCATTCATTCTAGCGTCCTAAATAAAAGTTTACAAATCATATAAACGTTTTAGCTAGAAA
AATATGATCTAGATTTTTTAGTCTAAAATAAAACATAGATTTTTTGAATTAAAGAGATTG
TAGTCAATAATAGGAACGTCAATAAACTCTCGACGTCGAATAGCTAAAAAAAAATTAGTA
AAAAAGGAACCTGATCGTTAGTGGATAAATAAAACTAACAAATGGGCGATTGTGTTCAAG
TAATTTTACAAAAAAATAAAAAATAAAGTTTAGCGAACGTCTACTCTATTCTAATTCTGT
TCGCAGAGTAAATACAATTATAACTTTATTACTATTGTCCAAAACCTCCGCGTAGACCGG
TGTAATGTACAATTTGGTTGCTTTGATAGATCGGAATTACACTGGATATTTATCTGGATT
TATTACGTCGGAATAGAGTCAATATATAGCACAAATAAAATTTCAACAGATTTTTATTAC
GCTGCATTAGGTTTGGTAATTTCTAATGGATCTAATTATGCCTCTGAGTATATTTGCAAA
AATGTGTAAAGTGATAAATCAGTGTTTTTGTAAAAAAAATTTTTACCTATTTTATTATTC
ACAATATGTACCTCTATTCCTACTTTGTGTAATTTATGGTGAATCTGATAAAACATCAGT
GACTTATATCGTTCTTTTAAATCGACTTAATGCAGTGTCATAAGTTGATAATATTAATCC
TTTGAGCGCAAACCATCGATAGATCGACTTATTCATGCGTAGAAAGTGCGGAGCGTTGGA
TTAGCGACTATTGTGCAGTTTGATTATTGGTGTTATATCCACTATCGACCTGTACGGACG
TGTCTT
(3426 bp)

- SilkBase 1999-2023 -