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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25360_c4_seq9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_sorting_nexin-16_isoform_X2_[Papilio_xuthus]
Ontology
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005829 C cytosol
GO:0006622 P protein targeting to lysosome
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0008333 P endosome to lysosome transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031313 C extrinsic component of endosome membrane
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0035091 F phosphatidylinositol binding
GO:0045022 P early endosome to late endosome transport
Transcript
Level		FPKM:5.09 TPM:4.71
ORF Entry
Sequence
(Nucleotide)
TGTGCTGTAATTGGAAAACTACCAGAGATACTAAAAACTATGTATAGCGAGCGGGCATAC
GGCCGCGAGAGTGACGTACAGGATTTTTATAAAAGCGTATTTTGTTAGTTATTTAAACTA
TTACATATTTATTTCATTAATGTCCTTGAGAGCACGGGTAGCTGGGCTGAAACTGGCCAC
GTCCTTTGAGTTAAATTTTACGCTTTCGAGGACGTTACAAAACTCGTACCTACTAAGCAC
ACAGATGTGCTCCAACAATATCCACTGAGTTTCTCGCCGGGTCCTCTTAGCAGATCACGA
TTCCGATCCGGCGGTAGATTCAGCGAAGCACTGCCATTGCTAGGGCCAGTGTTACAAAAC
CCTTTCAGATGGAGACGAGCTCCGCCCCACCAGGGTTAGGCCGGTTAGGGTGAAGCCCGA
ATAGCCCTGGAAGTCTATTTACAAGTAAATGATAAAAACGTTAAGTTTGAACTTCATAAC
ATTGCAATTAATCAAGCTATCTCCATCTCCGAAACAATATCTTGAAAATGAACTTTAATT
ATCAAGAAGTGTAACATAACCATAGCGCGATTCAGATATCGAACAACGCCATCTATCGAA
CGCTTTTGTAAACAAAACTAATACTCTCTTTAGAATATAAGAAAACTTAAAAAAAATTAT
GAATGCAGTAATCTCCGATAGACTTCTAGCCTTAAATATATACATATACGTACAGATTAA
ATGCATTTAAATGTAAAAAGAAAAACTTAGCACCTAAGTTTTGGTAAAACAAATAATAAC
TATTATTGCAAGCTTTAAAAAAAATACGGCCTTTTTTAGTAACGAGAAAAAAAATGTGTT
AATTTCATACCCTGTTTATTAAGGCGTTTGGGGCAAATACGTGTCATCTGAAAAAATGTG
GACGGATGCGAGGGCCGGCGTGTTCACGCGCGGACAATGACCTCGTATGAGCGGGGTCAA
CGAACCCACATTCATTAGTTATACATTGCGGGTGCAACCCTTAAATCTTGTTTCGGTCAA
TTATTCGAAATACTTGTACCCCTAGGGCCAGTATAATGTATGATGAAATTTCCTAATCTA
GTAAATACTAATGTTATTTATTTTTGTACTACAGTTACCGCATTGTCCGATGGTGCCCTC
CAAAAGCGCCAAGCGTTTCTGCAGGTGCATTATGGTCGCGTCTTTCTGTTTCAGCTGCAT
TCTGAGGGTGGTTATAGAATCTTCTAGGGCCCCATAAACAGCTTGAACTTCGGGTTGATA
GCTGAAGTCCTGGGGCGGTTCGTCCAGGCAAAAGAATTCCCTCACTATTGGATTATTCGG
TAGCTTGTACAGTATGACGTTGACGAATGTCTGCAGGCCGCGGACTCTTTCCTCCAGGAA
TGTCGGCTCGAAATTGTCGCGGAACCACCTTTTGCCGGGAAGAGGCAGTTCGATATTGGG
CTGCTCCGATTTCAATCTGGTGTACAGCCTGACGAAGTCTGTGTACCTTCTGAAAACTAA
CCACGATTGATCGCGTTTGTCGTCTTCGACTTTGAGCTTGTATATTGTGAACCTGGCCCT
CTCCTCCATCACTTCGTAGCCGACAATGGGAATCTGGAGCTTATCGAACTTCTTGATCTC
GGCCCGGTGGAGGCTCAAGTCGATGTTGCTGATGCTGTTCTGTATCGAAGACAGGCTTCG
GGTGTAATCGTTCCTCTGGTTCTCGTGCAAGTTATGCATGCTCTTGTGCATTCTTTGAGG
ACGAACTGGCATCTCGCTGTCGGAAGTCGAGTCCCGTCGGTTCTTGTAGTAACGCCTGAT
CTTGCCGAACGTGGTGTTGTCTTCGCTCGATGCGGACGATACGTCGTTGTTCATTGCGTC
GCGACTTTGAAGGTTGATGTTTTGCACTATGTCCATTGCGGTTCGGTGCTGTTAATGTCA
ATGATGCATATCCTTTACGCTTACGTTCTATATTTTATAGCACACCCACTGGAATTAATT
TACGAAATTCGGTCACAATAACTTTTTTTGTTTTCTTTTTTTTTTGTTTTCTAGAGCTTC
CGATCAACTTTCTTTATTAAAAATCCCTGTACACTTGCCGACAAATGTCTTGACATTATT
AAGTTTGGAAAATTACGGATCAACGCATTCAATATGGTATACACACATCTGTTCGCGTCA
CTGTTAAAAAAATAAACAAATTTACGAAAATAAATCACGACGTTTTACCCTTTGTCTGTT
GTCAAAAAATGGAACATGTCAAC
(2243 bp)

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