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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25294_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_TRC8_homolog_[Amyelois_transitella]
Ontology
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0007418 P ventral midline development
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045926 P negative regulation of growth
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:16.23 TPM:15.03
ORF Entry
Sequence
(Nucleotide)
CAACAGGGCAACATCTAAATTGGTAACGTCAAATTTTTATTGTCGCAAATTTTCAGTCAT
TTTTTCGTATCAATTTACGTTTTTTTTTTTAAAACAACGAATAAAGCACATCTTTATAAG
TTCAATTTAATTTCAGTTATAAAATATATTTCAACTTGGTATAGTAGACGTATGCAGTGT
GTAACAGATGCTTGTGTTGTATTTAAATTGTCAGTGATAACGTGTGTGACTTTCCGCATA
AATGAATAATGTCGCTGAGGTTGAAGGCACTGGCACTAGTGGAGGTGCTACTGAGGGTGC
CACCGTTGTTTGTGGTGGATGAGTTCCTTAAGATCAGCCTAGGGCTGCCCGTGTCCAGCG
AGGAAGTGCCAGTATTGAGCAATGTCACAGTGGACCACGTCGATATATTGGAGCCAGATG
TGAATTACTACGATGCAAACTTCTATAATGCATTTTTCGTCACTTTTTTCAAGTTCCTTG
TTTGCTGTTCAGGATGTTTATCGTCACTCTGCATTTTCGTACTATACGCGAAGCACCTCA
TCATCGTATACCTTTACCTCACGTCGCTGGGCATCGTGTTCGTGTCGTACTGGACCAATG
TATCCGCAATCAAACAGATACAGGCTCTCGCACAGCTAGCCACCTCGCCTCACCACTCGT
CCAGCATCCTCGAGGACATTCTAAACTTAAACCTTAAAAATCTGTTCGATCTCGACGGAC
CCGGCGTTTTGGTGGTACAGAACTTCGCGATACAGTTCGCTCTCTCGATCGTTTTCAGAA
ACGTCCACCTCGGGCCCCGCGTGCCTCTGATACAAAAGCTACTGCCGGTCAGTTTCATGG
CCCCCTCGTTTTTGGCCATGCTACCGATGCCGCCAAATCTTCTGCACCACTCACCAGTAT
TTTCGTCGTTACTACCACTTCTCCTTGTCAAATTTGTACTGTGGTCGTCGACTTACACCA
TCATTCACGTTATCTACGCCGGCTACCAGCACGGTAGATTGTTTGTTAGCAATTACGGTC
TGTCAGCGTTAGTCGAAACTGAGTGGATGCGACTTAACGTCCCCTGCGTTTTGAGGGTTT
TCTGGGTGCTGCGAGTCGCCGAGCACGCCATTCTCCTGCTCATGGATAACTACGATGAAG
ACACAGAGGAAGGTGTCCGAATATCTACGCTGCTTGCTGTGCAATCGCTCGCTTCAATGG
CGAAATCCTTACTGGTGACGGGCTGTGAAACCATCACCGCGGTATTAGGAATGACATCAG
TGATCTCATTTTTCTGCCATTACATTGGAAACTTCTTCCAGTGGATTCTGTTGACCGACG
AGGAAGAAGACAAAAGTATCGGAACCGTATCGGCGATTCTGTTTTACATTTTAGCACTCC
AAACTGGTCTAACTTCTCTACATCCAGAGAAGAGATTCATTCGTTTGTGCAAGAACGTCT
GCTTGTTGTTCACGGCTCTATTGCATTTCCTACACAACATAGTCAATCCGATGTTGATGT
CGTTGAGTGCTTCGCACAATCCGAGCATTCACCGGCACGTCAGGGCTCTGGGCGTATGCG
CGTTCCTGATAATCTTCCCCATATCGCTACTAGTGTACTTGTGGTCTCAACACAACGTGT
CCACTTGGCTATTAGCGGTCACCGCCTTCAGCATAGAAGTGATAGTCAAAGTGGTCGTTA
GTCTCATGATATACTCCTTATTCCTGATCGACGCCTACAGGAGCACGTTCTGGGAGCAGT
TGGACGACTACGTGTATTACATACGCGCTTTCGGTAACACGATCGAATTCTGTTTCGGTA
TTTTCTTGTTCTTCAACGGGGCCTGGATCCTGTTGTTCGAATCGGGCGGGGCGATCCGCG
CCGTCATGATGTGCATACACGCGTACTTCAACATATGGTGCGAAGCGAGAGCCGGCTGGT
CCGTGTTCATGAAGCGTCGCACCGCGGTTAACAAGATCAACTCGCTCAAAGAGGCCTCGT
ACACTCAACTCAGTAATCTGGACGACGTGTGCGCGATCTGCTACCAGGAAATGCACTCGG
CGAAGATAACGCGCTGCAACCATTTCTTCCACGGCGTCTGCTTGAGGAAGTGGTTGTACG
TGCAGGACCGGTGTCCGCTGTGCCACGATATCCTGTACAAGATCGACAACGACGCGAACA
AAGACTCGAACTCCGACGCCGAGGCGGAGGAGAACAGAAACAACCAGAACCATGTGTTGG
AAGAGGGGGCGGACCTGCTGCTGGGGGATGGCGTGAGGTGGCTCCGCCAGAACTAATCTC
CCATACTCGCTTGAATGTCTCTAAAGTATAATAATTTATATAACGACTTATTTGTGTGTG
TGGTATAATCCTTTCGATTTGTATAGTAAGTTATTCGTTTTAATATTATAGTTATCAAAA
CGGCACACCTGTGATTTACGATTCTTTATATTATTATTATGTTTCGTGATAAATTATATT
TCGTTAAGGGCGTTTGCACGTTCAAATGGACGTGTGGCTTTCGGAGTTCCCTAAAATGTA
CAAGTGAAAAATTACTAGTTTTCAAATTTATCAGGAGCTAAATGCAATAAATATTTATAA
AAACAAATACAAATGCTTTAAAACTTTAAAAAGAAAAAATACCGATTTTTTACAGAACGT
TACGTACTAAATAATATGGCTAAAATTTGGAAACGA
(2676 bp)

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