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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25282_c0_seq12
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_huntingtin-interacting_protein_1_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005856 C cytoskeleton
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0006919 P activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0030136 C clathrin-coated vesicle
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030665 C clathrin-coated vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0035091 F phosphatidylinositol binding
GO:0042981 P regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0048260 P positive regulation of receptor-mediated endocytosis
GO:0048268 P clathrin coat assembly
GO:0072583 P clathrin-dependent endocytosis
GO:0097190 P apoptotic signaling pathway
Transcript
Level		FPKM:1.90 TPM:1.76
ORF Entry
Sequence
(Nucleotide)
ACTAATCTGTGAATACAACAGTTAGTCTTTTGGTGGTTGTGTCTGTTCCTCACAAAATCG
AGAAAGTAAACAGTGTTATATAGTTTTCAAATAGTAAAGTAATTTAAGTAGGTAGTGTTT
TAATTAATCTGCGAGTTAAGAGTAAATCATGGAGTAAAGTATGTAATTTAAGTAAATAAA
TCTCAAAATAAATTCTGTACCTACCAACATAAATAAATAAATAACTTTTAAACTTGATTA
GAAACAATTAACTTGAACCATTCAACCTGTTTAAATTAGGGGAAACTATTTAAAAAAAAA
ACAGACTTTAACTCAGTGTATATGTGAACAGTAAAATTAGTGTGCTAAATTTTAATACAC
TGAAGACGAGAAATTCTAAAATATTTTGTGGGTGTATGTACTTGTTAATGTGACAAACTT
ATGGCGTCTTTATCCTTGCCCCGTGTGCTTCAGCTGAAAAAGAACAGTCTGGATGCTGAA
CGTGAGCAGTTCGAGAAGACCCAGGTTTAACGAAACTCGCACGTAACTAATGCATGCTGA
CCGACCAACTCGAAACTAACACGCTATGGCGAATCCGAACGATAAACGCTTCTTCCAGCT
GACACTAGCTATTCAGAAGGCGATCAACACCAACGAGACACCGGTCAAAGAGAAACATGT
CCGAAGCACGATCATCGGCACATTCAGAGAACAAAGCGCCATCACCTATTGGATGGTCGC
CGTCCGACTTCCGATCCAGGATAATCGGATCGTGGCTTGGAAGTTCTGTCACGTGACCCA
TAAACTGCTGCGCGAGGGTCACCCGGCGTGCCTTGACGATTCGCAGAGGCACATCTCCAT
GATCGAAAACCTCGGCAAGCTCTGGGTGCATCTTCGTGAAGGCTACGGCAAGCTGGTGCA
TCTGTACTGCAACCTCCTAGTGTGCAAGCTGAAGTTCCACGCGAGAAATCCTCGTTTCCC
AGGGAACATGCAGCTAACGGCGGACGAACTGGACGCGATCGCCGAGAACGACGTCAACAA
CTATTTCCAGTTATGCGTAGAGCTGTTCGACTACATGGACGAAATTCTAAATTTACAAGC
AGCAGTGTTCGACAGCCTGGGCAACGCTCGGGCCAACTCGATGACGGCGAGCGGCCAGTG
CCGGCTGGCGGCGCTCATTCCGTGCGCGCAGGACGCGTCGCAGCTGTACGACTGCAACGT
GCGCCTGCTGTTCCGGCTGCACGCCGCGCTGCCCGCCGACACGCTGCTCGGACACCGCGA
GAGATTCAGACAACAGTTCAAGAAACTGAGCACGTTCTACAAGCACGCGAGTAGTCTCCA
GTATTACAGGAATTTGCTGACTCTGCCGGTGTTGCCATCTAATCCACCTAATTTTCTACT
CCAGAGCGAGTTCGGCACGTACGTGACGCCGGTGGTGTCGGTGCCGGAGCCGCCGCCGGA
CGAGCCGGACGCGGTCGGCGCGCTCGTCGACACGTCCGACGCACTCAGCCAGTCCACATC
GGATCAGTTCGAGGAGTTTGAGAGTCGTCCGTCGGCGTCCCCGCAGCCCGACCCCGTCGT
GGAGCGGGACCGGCTCATCGACCACCTGCAGAACGAACTTAAAAGGATGAGGACCGAAGT
ATCACAATTGGTGCAAGAAAGGAATTCAATGCTCGGCTCGATGAGGGAGCATTGTACACG
TTTAGAAACTCAACTGCAGTCCGCTAAAGCTGAGTTGGAAGATGAGAAACAGAGGGCCGT
GGCTTTGTCTGCTGAGACCCCAGAAATTAAACAGAAACTGGTTCAAACAGAGGAGATGGC
TAAAACGATCGACGAAAAGTTCCAGAAACTTAAAGGGGCGTACACACAACTACGGGAAGA
ACACATCGTTCTGATTAGAAAAAAAGCCGAAGTAGACAAAATGGCCGCCAATTTACGCGC
CACAGCCGCTCAGCATGAAACCGCCAAAATGTCGTTACAGCAACAACTCAACGACAGAAT
GAAAGATGTTGAATTACTACAACAAAGTGCTTCGTCGAGTGAAGAGATTGAAGTGTACAA
ATCAGAAATAGCAAACCTTCGTAGCGAATTAGAACAATCTAGAGAAAAAGAGAATGAATT
CCAGATCTTAAAAGCTTCCATGGAAGCTCTAGAGATTGAACATAAAACTGTTAAAACTGA
ACAAGAAGACAAAATCCTGACGATATCGAATGAACTCAAAGAATCTAAAGAAATTTTAGA
AAAAGTAATACAAGAAAAAAATGATAAAGATACTGAATTAGTTAGAGTTAAAGAAGAATT
GTTAGAATTGAGAGAAAAGAGTGGAGACGAGTATAAAAAGGTAGTTGAAGAAAGAGAGGA
AGCTCTTAAAAAAATCACCGAACTATCAGAAACTCATGCAAAGGAAAAAGAGGAATTAAT
TTTTTCGAACGCTGAATTTGTTAATCAATTACAAATGGATTTGGATAGTTTGAAACAAAA
TTTAGCGGATGTTGAATCGAATTATTCTTTAAAATTTGAAATCCTTAATGAAGAAATGCT
GAAAAAGAATTCAGAGTTTGAAAAAATTCTCAACGAGAAAGATTGTGATTTAAAAGAAGC
TCTACAAGAACTTGAAGCGATAGAAAACGATTATCAAACCGTTGAAAAAAATTACAAAGA
ACAAGAACAAGAGAAGCAGGAACAAATAAATAAATTGTCTTTGGAAATAGAGATTTGCAA
AAGAAATAATGAAATCGTTCAAGAAGTAAACAATGAGAAATTAGAACTTGCTAATCGGAT
ATCGGATTTAGAATGTTTAGATGAAAAAAATAACAATAAAATTGGAGAATTAAACGAAAT
AATACAAGAACAAAAGGAGCTGGTAGAAAGGGAGAAACAGCAGAATGAATCACTGTTGAT
AAGAATCAAAGAACTTGAATCAGAAAGAGAGGAACACAGTAAGAATATTGATGAATTAAA
TGAACAACTAAAAGATGCCTTAAGTCGGTCAGAAAAATTAAAGTTCGATTATGAAAATCA
ATTGAAAAATACTAATTACAATGTAACGTTATTAAATGATAAACTTCAGAACGTAACTGG
TTGCAAAGACGATTTGATAGATAGCTTGAAAAGCATGATTACCGAAAAAGATAAACAGGT
TATAAACTTAAATTGTGAAGTAACCAAACTAACAGAAAATGTCACCAGACTAACTGAAGA
ACTAACCGAAACTCATGCTGAATTGGAGATAGGCAAGAACGAATTCTTTACTTTAAGAGA
AGAATTCGAAAATATCATGGATCGTAATGAAAAAGATTTGGCCTTAAAAGATCAAGAACT
TGCCAACCTTCGGGACGAGATCAATAAAATAACCAAAAAGACGGACAAACTTGAAAAAGA
AAAAGTTGATTTACTTTCCGAATTGGATTTAGAGCGACAGGCGTTAGAAAATAAAATAAA
AGAACTTCAACTCGATAACCAAAGACTGCAAGCTGACTACGAAGCCATAGAGTCTGAAAA
ACAAAAGCTAAGCCATGAATTGACGTCACAGATTGAAAAGATCAATTTAGATTACGAAAT
GTTAATGAACACAAATACAAATGATAAAGTTGAATATACCGAACGTATTAATGATTTACA
ATTGTCAAATTCGACAAAAGATGAAATCATTAATACACGTAAAGTTGACATTGAAAATTT
GAAAGCGGAAATCGAAGAATTGAAACAAAATAATTTAAAAGAAAAGGACGATATCGAAGC
GGTTCTGACTGAAAGAAATAAACAGAAACAGTTGTCGGAGGCTAGAATAGAGCACGTCGA
ACACATGCGATTGAACGCGGAGTGTGAATTACAGGATTTGTTACAAAACAATTCCGTACT
AGAAGCGGACGTGGCGGCTTTGAAGCGGCAACTCGACGAGGCGCAAAGGGAACTTGAGAA
ACAGCGTCTCGAAGCGGTGACGTGTGTCGGGGAGGCCGCTTTGGCGCTGACGAACGAAGC
GTTAGCGGCCCTCGAGCGGTCCGACGCGCAGGAGTCGACCCGGCTCGCCTCGCAACTGGC
CGTCGAAGCTTTCGAACAACTCGACAAATGTTCCGAGATCAAGGGCAATGAGGAAGCTGT
AATGAAATCCGCAATAAACGTGGCCCACAACACCGCGCAGCTCGCCGGCTACGTCACAGA
GGCTTCCCATGTTTCCACCAGCTTGGAATTGACGGATAAACTACAGAACGAATGCCGCGC
CATGCTGAGCTCGACGAGGGAGTGCCTGGAGGCGGTGCGGGGCGGGCGCGCGGCGGGCG
(4259 bp)

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