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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25277_c1_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PR_domain_zinc_finger_protein_16-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003713 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0017053 C transcription repressor complex
GO:0019827 P stem cell population maintenance
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0030512 P negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030853 P negative regulation of granulocyte differentiation
GO:0033613 F DNA-binding transcription factor binding
GO:0035019 P somatic stem cell population maintenance
GO:0043457 P regulation of cellular respiration
GO:0043565 F sequence-specific DNA binding
GO:0043586 P tongue development
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046332 F SMAD binding
GO:0046872 F metal ion binding
GO:0050872 P white fat cell differentiation
GO:0050873 P brown fat cell differentiation
GO:0060021 P roof of mouth development
GO:0090336 P positive regulation of brown fat cell differentiation
Transcript
Level		FPKM:1.97 TPM:1.83
ORF Entry
Sequence
(Nucleotide)
CAAACGAAAACTTTGGTAAAAATTTAGACTAAATAAGATTTCTTTTCGATTTTCAAATCA
CGACTAATTAATGTATGAAATATTTTTTTTATTTCAAATAAAATCACTTCATTCTATCGA
ATTGCTGTATCAATAGTCATTAAGTAAAACGTCGCACGCATCACTGGGACATATTTAAAT
TTAAAATTCTAATAGTATTTTTATTTATTTACAATCTAACATTAATATGTACACAAAGAG
TTTAGCTTATTTCACGAGAAGTGAACTAGGAACAAATATTTAAGTCACATTAAACATTTT
TGAAACAATTACTGATTTTACGACAGAATCAATAATGTAGCTAAGATAACGTGATTAATA
AATCTATTGACCTCAAATCGACGTATTTACAACGTTTATCTTTATGACTACAGCATTTAA
TTTTTACATTAACTTTACAATTAACATTCAATGTCATGTATTATGCCCTTACAACACTGA
ACTGAATTCAGAAGGGTATTTAGTCTTTATTATATAGGTACACTTCAACAAGTACTAGTA
GAAGTTAATATCTAATACGTTAAAGAACTGTTGGATTTGGAAGGTAGTGAAGGATTCTGG
GAGCGCTATGTAGAGATGGCGAGCGGTGGAGGTGAGCACGTCACCTTTCCCATGAAAGAA
CGGATATCATCAAAGTACGCATCGTCGCGCTCCGTATCTGCAGAACTTGGTGAATCACCG
CCTTCAGCCTCGTGCTTCTTCAAATGCCGATCGAGGTTTGTCTGCTGCCCGAAGCACCTA
TCACATAGCGGACACCGGAAAGGCCGCTCCTTGTTGTGAATGTTCCTCACGTGTCGCTGC
AGATTCGATGAGATCGAAAACGAGCGCTCGCAGTATTTACATTTGTAGGGCTGCTCACCG
GTGTGAGTGCGCAGATGTCGGGTCAGGTTGGCGCTGCGCGGGAAAACCTTCCCGCAGAAC
TTGCAGGCGTACTGATCCCGACCCTTCCTCGAGCCGGAGTTCAGTTCTCTGAACTTGGCG
TACGCGCTCTGTTGCCGGTCCGGTCCGTCGGTACCCAGAAGGGGGGATAAAAAATTGAAA
GGACTTGGAACGTAAGGAGAGTGTGATGCATTCAGGATAGACTCGGATGCGTGAAATGAC
GGAAATCTGGGGCGATACATCGCGTCAATGATGCTGTTGTGTTGAGGATGAACGGGCATG
GGAAACGCAATTGACGGGGAGACCATCTGTGTGGGAGAGTCTCTCTTTGGCTCTACGCCC
TCGACGTCCACATCAGTGGTGTCATTCTCGGGTGTCTTGCTTCTGGCGAGAGGACTCTCT
GGTGGTGAATATGACTTGACAGAATTACGAAAGGAACGGTCATCGTTTTCCGCTTCTGAT
TCTTTGTCGCTCTGTTTCTTTGTAACGGACAAATCGAGAGGCTGGTCTGCTTCATCTTTT
TTGGCATCTTCCTCCGCCTCAGAATACTCGGAAGCTTTATCGTCTTCCATTACATTCTTT
GATAAATCTTTCGGTAAAGATGGAGAAGATGGTTTCACCCCCATAACTTCATTGTTGTTT
AGTTTTAGTGAGAAGTTAAATGGAGACTTTCGTTTCATTTCGTCTCTTGTGAAATTGAAT
GGTACAATAGGAGTCTGCATTGCCATTATTGATGGATGCGTGGAAACTTCTTCAATTGAT
GGTGAAGACATTTTTGTGGATGTGCCCGGGTATTTACTAGGCGTGTTTCTATCAGAACTA
GCACTGTCTTTCTTGTTCAATTCTGATTCAAAATCCTTCATTTTTTTCGCATCATCGAGG
GACGTGCAGCTGTCCATGCTTTTGACAGACATTCTACCTTCTTGTTGTTTGGAAACTAAG
TTAGCATTTGACATAGCAAGATCGTGTTCCATGGCCAATCTAGCGGCTCCTTGTACATTA
AGGAATGGATTCAAAAAGTCAGGTGAATAAGCAGCAGCGGCTGCAGCCGATAGCAATGCT
GGGTAGTGGGCAAACGTGTTATAATGCAACGGCAAAGTATGACCTCTGTACATTGGGAAT
GGATTGGCGTTATTTGCAGGATTCATCGCAACGTTTGGTAAAGGTGGAATCGGGGGCAGT
CCTTGCGGCATCTGTCCTCTTAAATTTACGGATGCCGTGGCAGTATCGCAGAATCTCTTG
TGCTTGGTCAGGGATGCGTACGATGCGAAGGACTGTCCACACTTGCCGCATTCAACCACT
GCACGACAAGCGACGTGCATGCGTTTATGGCGGCACAGATTTGAAAACTGTGTGTAGGCC
TTAAAGCAAACTTTGCACTGGAATGGCTTGACGCTGGAGTGTATGTGCGTGTGCTGCTTG
AGGCCGGAGGAGGTAGCGAAGGTCTTGCCGCACTCGGGACAGGCGTGGCTGCGCGCGCCG
ACGTGCTGCACGCGGATGTGGCGCTGCAGGTTGGAAGGATCGGTAAACGCCTTAGGGCAG
TTTTCGCAAGGATATTTCCTGATGTCGGTATGTGCGAGAGCGCGGTGTCTGAGTAGCAGC
GCCCGTGAGCTGTACGAGCGGTTGCAGAGCTCGCAGTGGAAGGCACCGGCCGGCTGACCG
TGACGCTGGATCAGATGCTGGTCGAGCAGTTCTATATTAGCGCAAGGAGCGTCGCAGAAG
GAACACCTTGGCTCTGTGTCTTCTCTGTCTTCTTCTTCAGTTATCGACTGGGAGCTGAAC
TTTTCGCTGGTCGCTTGACGATCGTCAGCATTGGGTACAAATACTTCGAACGTCAGCGGG
GTCCTGGGTCCGAGCAGCAGCTCCTGTCCTGAAGGAATATCTCGGGTCGCCTTATACCAT
ATTTCGCCTGATAATAAAACATGCTGCATGTTGACGTCCCGAGTGTAGCTGCTAGAACGA
ACCAGTTTGAGCCAGTTCGTCTTGTTCGTGGTCCCGTCCATCCAGCATCGTATGCTGTTC
TTGCCGATAATCTCCCAGGCGTATCTCCGGTCCAATGGCTGAGTCTCCCATTTGCCTATA
AAAGGTCCGTATTTTGTTCCGACAGCAATATTAGCGCGCGCGTACACTCCATCGTTTTTC
AACGCTAATTCTATGGGCAGATTCAGTTCTGGATCGCCTACGTCATCATCTTTCGTGTCG
TCATTTTCGTTTTTCACATCTACGAACTTTTGATCGGGTAAATCGAGAGGCCTCGGCAAG
TAGGGCCTGGCGTAGTCGGGGAAATTGGACAAGTATGTTTCGGGTAGACCAAAGTCCAGA
GTCGCGTAGTAATCTTTCATGTCGGCTCCTGGCGCCATGTTCTCTTGTTTAATGTGGACT
AGGGTGGGCGCGGATTCCGATGTGACAGAGTCAGTCGGGCTCGGCGGTGGGCTGCCAGAC
TCCTGGCTATCTCCTGCTGTGAACAAAAAAAAAA
(3394 bp)

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