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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25251_c0_seq5
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
Transcript
Level		FPKM:1.67 TPM:1.55
ORF Entry
Sequence
(Nucleotide)
AAAAAAATTGCTGTTTAAAATATCGACGTGTTTGCCTGGCCTTACCTTTGCTGGTGAAGC
CAAGCAAGAGTGGTGTGTAGCTGTCTCATACAGTGATGAGCCCACAACGTCGTAGAGCAT
GTCGCCTTCCCCTTGTGGTAGAGGGTAGCACTCGGCATATTCCATAGCCAAGCTGGAGTC
ACTTCGACTGTGAAGGCGGCAAAACCATGCCGTGGACATTCTTAAAAATACTAATCTTAA
ATGTTTGTTAGTAAAACACATATTTCAATTAAGTAAAATTTGTTTTTCAGACTGGACAGC
TCAATGAATACACAGAAAGAAAGAAATTATCTTCAGATGTTTGTTGTATGGCATTAGGTT
CAGTTGCAGCAGGGGAACAGAGAGCATGGTTTTTAGCAGTTGGTCTCAATGATAACACTG
TCAGAATTATCTCTTTGGACCCAGCAGATTGTCTTTCACCACGTTCTATGCAAGCTCTTC
CTGCTGGTGCAGAGTCATTATGCATTATTGAGCAACCATTTGAATCTGGTGCAAAATCTG
CCCTGCATTTAAACATTGGCTTAAGCAACGGGGTGCTGTTAAGAACTACCTTAGATTCTG
TAAGCGGCGATCTCGCAGACACTAGAACTAGATACTTGGGGTCAAGACCTGTAAAGTTAT
TTAAAGTAAGGGTACAAGCTGCTGAAGCAGTACTAGCTGTGTCGTCTAGAACATGGCTGG
GATATCACTATCAAAATCGTTTTCACCTTACACCTCTATCTTATGAATGTTTGGAATATG
CAGCAGGATTTAGTTCAGAACAATGTACTGAAGGCATTGTAGCCATATCTTCAAACACTC
TGAGAATTTTGGCTTTAGAAAAATTGGGAGCTGTATTCAATCAAACATTTGTCCCTTTAG
AATACACACCAAGAAAGTTTATAATAAATTCTGACAACAATCACATTATAGTTTTAGAAA
CTGATCACAATGCCTACACAGAGGAAATGAAAAAACACAGAAGAATTCAAATGGCCCAAG
AAATGCGTGAAGCTGCTGCTGGAGGTGCTGCTGAAGAACAGCAACTAGCAAATGAAATGG
CAGATGCTTTTCTATCTGATACTTTGCCTGAATACATTTTTTCTTCACCTAAAGCTGGAG
CAGGCATGTGGGCATCTCTAATTCGTGTTGTTGACATGGGTATTGGTGGGGGTCAACCCA
ATACATTATTTAGACTTCCACTGGAGCAAAACGAAGCAGCTGTTTCTTTGTGCATAGTAA
GATGGGCTGCACATGCTGAACATGCACAACCACATCTTGTGGTTGGTGTTGCAAAGGATT
TGATACTGTCTCCTCGTTCTTGCACTGAAGGCAGTCTACATGTTTATAAGATATATGGCA
ACACTGGAAAATTAGAACTTGTTCACAAAACTCCAGTAGATGAATATCCTGGTGCTATAG
CAGCATTTAATGGTAGACTACTAGCTGGTGTCGGACGCATGTTAAGATTATATGATATTG
GACGACGAAAACTCCTACGTAAATGTGAAAATAGACATATTCCAAATTTAATAGCAGATA
TAAAAACGATTGGACAGAGAATTTTTGTTTCTGATGTCCAAGAATCTGTATTTTGTGTCA
AGCATAAGAAAAGAGAGAATCAATTAATTATTTTTGCTGATGATACCAATCCTAGATGGA
TAACAAATAGCTGTATTCTTGATTATGACACTATAGCAGTATCTGACAAATTTGGTAATG
TGGCTATAATGCGGTTACCACAATCTGTAAGTGATGATGTTGATGAAGATCCAACTGGAA
ACAAAGCACTTTGGGACAGAGGTTTACTTAATGGTGCTTCACAAAAGGGAGATGTTGTGG
TCAATTTTCATGTTGGTGAAACTGTAACCTCTCTACAGAGAGCAACATTAATTCCTGGTG
GTTCTGAAGCACTACTATATGCAACAATTAGTGGGTCTCTTGGCGTTCTACTACCGTTTA
CATCAAGAGAAGATCATGACTTCTTTCAACATCTAGAGATGCATATGAGAAGTGAAAATT
CACCATTATGTGGGCGTGACCATTTATCTTTTAGAAGTTATTACTACCCAGTAAAGAATG
TGATTGACGGAGATCTATGTGAACAGTTTAACTCCCTAGACCCTGGAAAACAAAAAGCCA
TCGCAGGTGATTTGGAACGTACTCCCGCCGAAGTATCAAAAAAACTTGAAGACATTCGAA
CTAGATATGCGTTCTAATTAATTATAAATTATAGTTCATAAGCTTTTCTATTAATATAAA
AATAAAATATTGCGAT
(2296 bp)

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