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Last updated: 2022/11/18
NameA_BomaMG_comp25251_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)
PREDICTED:_splicing_factor_3B_subunit_3_isoform_X1_[Amyelois_transitella]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0042177 P negative regulation of protein catabolic process
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level
FPKM:1.48 TPM:1.37
ORF Entry
Sequence
(Nucleotide)
GCAAAACTCTCTCATTTGATTGGTCTGCGAAAACGAAGCTCAATGGCGTGCTCTGAATCC
GCCATTTTACCGGCAACTGCTTGTGCCGGTTCACCCGTGAAAATTAAATACTGCATCGAG
CCGCATTGCGGCCATCAATTGCCAATATTTAAAGGGATAGGTTAAAATAAGATCACGATG
TATCTCTACAATTTAACGCTGCAAGGTTCCTCTGCCATAACACATGCCGTACATGGAAAT
TTCTCTGGCACTAAGCAACAGGAGATTATTATATCACGTGGCAAAACACTTGAATTGTTA
CGGCCAGATCCGAACACGGGAAAGGTCCACACATTAATGAAAATTGAAATATTTGGTGTA
GTTCGGTCTATTATGGCTTTTCGTCTAACCGGAGGAACAAAAGATTACATTGTGGTTGGT
TCTGATTCTGGACGTATCATCATTTTGGAGTACATCCCAACTAAGAACATTTTGGAGAAA
GTCCATCAAGAAACATTTGGTAAATCTGGCTGTAGGAGAATAGTTCCTGGTCAATATTTA
TCAATTGATCCTAAAGGAAGAGCTGTTATGATTGGTGCAATTGAAAAACAGAAATTGGTA
TACATTTTGAATAGAGATGCAGAAGCTCGACTAACAATATCTTCACCACTTGAAGCTCAC
AAGTCAAACACACTAGTTTATCACATGGTTGGTGTTGATGTTGGATTTGAAAATCCCATG
TTTGCATGTTTGGAAATTGATTATGAAGAAGCTGATTCAGATCCTACAGGTGAAGCTGCA
CAAAAAACTCAACAGACTTTAACATTTTACGAATTAGATCTTGGTTTGAATCATGTTGTT
AGAAAGTACTCTGAACCTTTAGAAGAGCATGCAAACTTTCTCATAACTGTGCCTGGAGGA
AATGATGGTCCTTCTGGTGTCCTTATATGCTCTGAAAATTATCTCACATACAAAAATTTG
GGTGATCAACATGATATTAGGTGTCCTATACCTCGCAGAAGAAACGATTTAGATGATCCA
GAAAGAGGAATGATCTTTGTTTGTTCTGCCACACATAAAACTAAGTCCATGTTTTTCTTT
TTGGCACAAACTGAACAGGGTGATATTTTCAAAATAACTATAGAAACTGATGAAGATATG
GTCACTGAAATAAAGCTGAAATACTTTGACACTGTACCAGTGGCAACATCAATGTGTGTT
CTTAAAACTGGATTTTTGTTTGTGGCTTGTGAATTTGGCAACCACTACTTGTATCAGATA
GCACATTTGGGTGATGAAGATGATGAACCAGAATTTAGCTCTGCTATGCCTCTAGAAGAG
GGCGACACATTCTTTTTTGCACCAAGACCTTTGAGGAATTTAGTACTGGTAGATGAAATG
GATTCTTTGTCACCAATATTAGCTTGCCATGTGGCAGATTTAGCTGGGGAAGATACTCCG
CAAGTTTACTTGGCATGTGGGAGAGGCCCACGATCCTCCCTTAGAGCACTAAGACATGGT
CTTGAAGTTGCTGAAATGGCTGTATCAGAGCTTCCAGGATCACCGAATGCTGTTTGGACA
GTTCGACGAAATAAAGATGAGGAATACGATTCTTACATCATTGTGTCATTCGTTAATGCC
ACACTTGTTCTTTCCATCGGTGAGACTGTTGAAGAAGTCACTGACTCAGGATTTTTGGGA
ACTACACCTACACTTAGTTGTCATGCAATGGGTAATGACGCTCTAGTACAAGTATATCCT
GATGGTATAAGACATATTCGTGCTGACAAACGTGTAAATGAATGGAAGGCTCCTGGAAAA
AAATCTATAGTCAGATGTGCAGTCAATCAAAGACAAGTCGTCATTGCCCTGACTGGAGGG
GAGTTGGTATATTTCGAAATGGACCCTACTGGACAGCTCAATGAATACACAGAAAGAAAG
AAATTATCTTCAGATGTTTGTTGTATGGCATTAGGTTCAGTTGCAGCAGGGGAACAGAGA
GCATGGTTTTTAGCAGTTGGTCTCAATGATAACACTGTCAGAATTATCTCTTTGGACCCA
GCAGATTGTCTTTCACCACGTTCTATGCAAGCTCTTCCTGCTGGTGCAGAGTCATTATGC
ATTATTGAGCAACCATTTGAATCTGGTGCAAAATCTGCCCTGCATTTAAACATTGGCTTA
AGCAACGGGGTGCTGTTAAGAACTACCTTAGATTCTGTAAGCGGCGATCTCGCAGACACT
AGAACTAGATACTTGGGGTCAAGACCTGTAAAGTTATTTAAAGTAAGGGTACAAGCTGCT
GAAGCAGTACTAGCTGTGTCGTCTAGAACATGGCTGGGATATCACTATCAAAATCGTTTT
CACCTTACACCTCTATCTTATGAATGTTTGGAATATGCAGCAGGATTTAGTTCAGAACAA
TGTACTGAAGGCATTGTAGCCATATCTTCAAACACTCTGAGAATTTTGGCTTTAGAAAAA
TTGGGAGCTGTATTCAATCAAACATTTGTCCCTTTAGAATACACACCAAGAAAGTTTATA
ATAAATTCTGACAACAATCACATTATAGTTTTAGAAACTGATCACAATGCCTACACAGAG
GAAATGAAAAAACACAGAAGAATTCAAATGGCCCAAGAAATGCGTGAAGCTGCTGCTGGA
GGTGCTGCTGAAGAACAGCAACTAGCAAATGAAATGGCAGATGCTTTTCTATCTGATACT
TTGCCTGAATACATTTTTTCTTCACCTAAAGCTGGAGCAGGCATGTGGGCATCTCTAATT
CGTGTTGTTGACATGGGTATTGGTGGGGGTCAACCCAATACATTATTTAGACTTCCACTG
GAGCAAAACGAAGCAGCTGTTTCTTTGTGCATAGTAAGATGGGCTGCACATGCTGAACAT
GCACAACCACATCTTGTGGTTGGTGTTGCAAAGGATTTGATACTGTCTCCTCGTTCTTGC
ACTGAAGGCAGTCTACATGTTTATAAGATATATGGCAACACTGGAAAATTAGAACTTGTT
CACAAAACTCCAGTAGATGAATATCCTGGTGCTATAGCAGCATTTAATGGTAGACTACTA
GCTGGTGTCGGACGCATGTTAAGATTATATGATATTGGACGACGAAAACTCCTACGTAAA
TGTGAAAATAGACATATTCCAAATTTAATAGCAGATATAAAAACGATTGGACAGAGAATT
TTTGTTTCTGATGTCCAAGAATCTGTATTTTGTGTCAAGCATAAGAAAAGAGAGAATCAA
TTAATTATTTTTGCTGATGATACCAATCCTAGATGGATAACAAATAGCTGTATTCTTGAT
TATGACACTATAGCAGTATCTGACAAATTTGGTAATGTGGCTATAATGCGGTTACCACAA
TCTGTAAGTGATGATGTTGATGAAGATCCAACTGGAAACAAAGCACTTTGGGACAGAGGT
TTACTTAATGGTGCTTCACAAAAGGGAGATGTTGTGGTCAATTTTCATGTTGGTGAAACT
GTAACCTCTCTACAGAGAGCAACATTAATTCCTGGTGGTTCTGAAGCACTACTATATGCA
ACAATTAGTGGGTCTCTTGGCGTTCTACTACCGTTTACATCAAGAGAAGATCATGACTTC
TTTCAACATCTAGAGATGCATATGAGAAGTGAAAATTCACCATTATGTGGGCGTGACCAT
TTATCTTTTAGAAGTTATTACTACCCAGTAAAGAATGTGATTGACGGAGATCTATGTGAA
CAGTTTAACTCCCTAGACCCTGGAAAACAAAAAGCCATCGCAGGTGATTTGGAACGTACT
CCCGCCGAAGTATCAAAAAAACTTGAAGACATTCGAACTAGATATGCGTTCTAATTAATT
ATAAATTATAGTTCATAAGCTTTTCTATTAATATAAAAATAAAATATTGCGAT
(3893 bp)

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