SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25212_c1_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_vacuole_membrane_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0003674 F molecular_function
GO:0005730 C nucleolus
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006914 P autophagy
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0007155 P cell adhesion
GO:0007566 P embryo implantation
GO:0010506 P regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034329 P cell junction assembly
Transcript
Level		FPKM:11.22 TPM:10.39
ORF Entry
Sequence
(Nucleotide)
GGACAAAATAATTCTACTATAGTACTATTCCTTTGAGTCTTCAAAACAATAACTCGCTGT
TTACAGTTGAACACTTTTTCAAATTATCTCTTTAACAAGATGGCGCTTCTTAGTTCTACC
CTCCATATAACAGTATTAACAACACTCGTCGTCGTCACTAAATGTCAAAGTTCGTGTCAT
AACGCCACAACGCCACGCCATGAGTGTCTATGGTCTTGAACATAGAGTAATAGTTTAACT
TTCACCGCGGCCGTTGCACTAAGCACGGACGTGTACTACCGGCGTCGATGCGATCTCCCT
TTCTTTTGTCTATGCCGAGCAAGTCCGTTGACGTCGCCCGGCATTTTCAATCCCTATTCT
CTTTTCTTGCTCTTCTTCTTACCGACCCTCTTACTGTAGTTCTGGGCCAGAGCGTTCACA
ATCGACACAATAAAGTAAACGACCATCGCCAGAACGAACTTTTCTAGAATGTTCGATAAC
ACCGAACCCTGATTTTCTGGTATCTGCGTGGAATCGTTCTTGTGAAGACGCGCTTTCTGG
TTCCTCAAGAATTCCAAAAGCGGGGCCTCTAGTTTCGGACCGATGTACGGTATTTTTTCG
ACCCACGACAACGCTTGCCCAACCAAAGTCTCGTTGAACGCGATAATGACGAACATTTTC
TGCAGGTGCATCTTTATGACCGCTTTCCCGATGACCGTCGCTCCGAAGAACGTCCAAAAC
GGCACCAAGAAGTGTCCGCAGGTCAGGCCGGCCAAATCGAAGAGAGGGTTAGGCACCGAA
GCGCAAGCCAATATACCAGCAAAGCCTACGCGCTGCACTAATTTCTGCACCATTATTTTA
GCCCTTCCGGTCCTCGAATCATCGTCGGTGTTGAGTTCGGCGACCCCGGCCCCTGAGAGT
CTAGCGGCCCTCGCCATGAAGTACGGCGGCAGTTCGCCTAGAGCGGTGCCTATGCCCCAC
ATCATGGATTCGACGCGAACTTTCGCCATTATATTCCATATCGATACCGCGTAGTTAGGA
TCGACCTCAGCCGGACAAATTATATCATTAGGATAAGGTGGCTCCGGAAAGTTCAGTCCT
CCGCATTCATACGCTGCGAGTGTAACCCTCGCTATGTGCGGCCCCAAATACAATAGGAAT
GTGTGCAAGCCCGTACCGAGGCCCACAGAACTACAAACGCCTAGAACTACCCACCAGCCC
CACCAGGCTAGAGTGGCTACAACTAAATGCACGTACTGCTGATGAGGGCCGCTGATATAA
TACGAAATCGCAGTACCAATTATTGCCACGGCTATTGTTAACGCCAGTACTCTGTATGCA
ATCAATCTCTGCAATCCTGTGTTGATTAATATAAAAAGTTCTCTGAAGAAATACTCCAAT
GTGATGAGGGGCCGCCTCCACAACACAAGACTGTCGGCCTCCATTGAGGAATTTGTTTTG
GTCCTTATCTCCTTCGGGTGTGGAGCGTGCAAGCCGTTGCGCATGCGCTGTTCGCTGTCC
TGAGGTTGAGGAGTGACCGCCAGCTTGTAATACCCGAGACGGGCGAGATTACACACACTT
ATAATGGAAAATACACAAACACAAAAATAGTTATATTCGATGATGTTTAAAAAAAAAAAA
AGAGTAAATATTTAAATTACGAACGTCCTGAAGTTTGCTTTTCGCGCAGCGTATGAACGC
GTTACAAACTTGTTTATTACGAAGGCATGAGTGAAATGACTGACATCACGCCACCGCTAA
ATGAATTTCACTTTCAAGAGCTCTCTCATTTCATTTCACTATCGTTCGGTGGCAGCGTTT
GAATTTTAAAGCCGCG
(1816 bp)

- SilkBase 1999-2023 -