SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25204_c1_seq9
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_muscleblind_isoform_X4_[Bombyx_mori]
Ontology
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0001654 P eye development
GO:0001751 P compound eye photoreceptor cell differentiation
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006915 P apoptotic process
GO:0007275 P multicellular organism development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007517 P muscle organ development
GO:0007525 P somatic muscle development
GO:0007601 P visual perception
GO:0009790 P embryo development
GO:0010468 P regulation of gene expression
GO:0030018 C Z disc
GO:0031673 C H zone
GO:0042052 P rhabdomere development
GO:0045924 P regulation of female receptivity
GO:0046716 P muscle cell cellular homeostasis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050896 P response to stimulus
Transcript
Level		FPKM:0.63 TPM:0.59
ORF Entry
Sequence
(Nucleotide)
TGTCGCTAATATAGTGACCCTTGACTCCTCGACGTTTCAACATAAATTCAGGCCCGATAA
CCTTTAACATAAATAGGCGCGGAATAATAATAGTAATAATAAAGAGAATGTTGTAACTTA
ATGTTTGCTATAAGACACGTCGAGGATGAAAGGGCGCAAGCGCGGGCAGACCCTCGCACG
ATGAGTAGCGTGTTTGTGTGGTTTTGTGTCGAGGTGGGCGGCATGAGCGGCGCGGGCGCG
GCCGCTGGTCATCTCACCACGCTGGATCCGATCAGTCTCGCCCTGCTCGCCCCGCAGGCG
ACGTCACCTTATTTGTCGGGGGTGCCGGGCGTGGGATCGACGTACGCACAGTACTATGCA
CCTCAGCTGGTGCCCGCAATGTTGGGTCACGATCCGGCAGCCGCCGCCGCCTCGCCACTC
GGTGTCATGCAGCAACCCGTGCTGCAACAGAAATTGCCTCGTACCGATCGTCTCGAGATG
GACATGAAGAGCGTCGGTTCCTTCTATTATGATAACTTTGCCTTCCCCGGCGTGGTGCCG
TACAAGCGACCGGCTGCCGACAAAGCTGGTGTACCAGTGTATCAGCCGGCGACAACCTAC
CAGCAACTGATGCAGCTCCAGCAGCCGTTCGTGCCCGTGTCATTTACTGGACACCCTCCC
GGTGTGCCAAGATTTTAATCGGCAAGGATGTTCAAGACCTACCTGCAGATTCGTTCATAT
TCGCGAAGGGTGCGGGCTGCAGGTGGTGGGGTGCCGCGTGGTGGTGTGTCGCGATGCCGC
CGCCGGCACGTGCCGCCGCGCCGCCTGCCGCTACTACCACATCCCCGTTCAATTGCCACC
GGCTCTGCGTCCCCCTTAACCCTCCACCCACGACCCTGCACCCTCATCCTTCGCCCTCCA
CCTCTATAACCCCCAACCCCCCTCACCTCAATCCTCGTCCTTTGACATCGTCGCCCGCGC
CCTGCGTAATCCATATCGATCGCGCCTCTGGCACACTCAGGAAGGGCAGGTTCGGCCGGA
TGTTACTGTCGCTTCCGCGGCAGAGGTGGTGATATTTTAGTGAAAATCGGTTAGTGTAGA
AAGGGGCGGCCGAGTCGCGGACGCTGCGGCGACCGCGGCTCGCTCCCGCCCAGGATGAGC
ATAAGTCTTCGGGAAAGAGTGTGTACATAAGTAGCGGGATATGATTCTCAGGCACGGTCA
TGCGATTGTGATATGAATAGATTTCGGGAAGCCGGAGCCGTATGGAATTAATTTGTCGAA
ATCGTCGAGCAGTAGTTAGTGAGGTTTCAAATATTTTATGACTAATGTATAATTTTTTTT
AAGAAACGATATGAGTTCCTGTAATAGCCGGGACCTGGTCGCCCGGGTACTTTGTTGTGT
ATAAGTGACGCGTGTGGCCGGTGATGACAGGAGACGACCAGACGGACGGCTCTCGACTCC
TCGGTCAGTGTCTGATGCCTAAATCACCCCAGTCCCTGTAAGAGCATTTTTTTTGTGAGA
TTTACTTTACATTTTTTTTACGTATGTTATATAATTACGTTTTTCTAGAGGACAAGTTTA
CACTAGTTTAGAATTTAAGTGAATCAGTAACGGAACACCAATAGAGTAGCCGCTTCTCTC
CTCCGGCGCGGAGAGGTTCGACGCCGGAGCACAAGTCACAAGCGACGAGGTCGGCTCGCG
CGCGCCACGCTGTACAGTACCGAACGCCGTCGGCCTGTATTCCATAACTATTGTATATCC
CACGATCTCGTGCCGTTACTGTACAGTGCGTCACGGCGTCGTCCGGTCGTGACGGCTGTG
ACGCACGCCGCGCCCGCCGCCTCGCGTTCCGTTCGCACTTAGCGTCACACTCGTAGAGTG
ATATATAGTAAACATGAATTCGTAATACAATGAAAGAAGTTATCGGACAATATTGAAAAA
CGAATAAGGCAAACTTCCAAGCTATTTTAGTATGTAGAAAGTCGGCTTTTATTCCGGATA
GATTTTGCTAGAGAATCGTTTTGTTTCTAAAATAAATAAATAAAAATCAATAATCTGCAT
CTATAATATCGATATGCACAAATCGTTACCGACGATAATCGGGTCCGGTGTCGACTCGTT
GCGTATAATAAATAGCTGTGTTATTATTTTCGACATAAACAGTATTAAGGTTTTGATGAA
ATTTATCTGGTGGTACGTACGTTAGAGGTGGTATGCGGATAGAGAGAGGCGGAGTGCGCG
CACTGGCTCGGCTTCGGTCCCTAACGGCCCGTCGCCGAGTGCAAGTGATGGGAAATCGTC
GGTCGCGTCCGATTCGTACCGCGCACGCACTCCGAGGGCATGGAAGCCTAATGCCTAATA
TTATTCCTAGTCCATATCCTTTTGTTGATCAGTCATGCGATTAATGTTAGAAATAAAATA
TTAATAATTTGATTTATTCCTCCCATTTAGTGGATATTTTGATAATGATATATTAATAAT
GAAATATTTAAGATACATAATACATATTTGATTCTAAATCCTGATAAAGTGACACTACGT
TAGTAATTTAGTCGGAGGGATACTTGTGCCGTGATTATATTTTTAGGTATATATTATGAA
ATAATTCCTAGCGTCGGAATTAAAGAAGTGACTAATGTGTAAGCGTGTTATGTATATTTA
TTGTCGTAAACGTAAGTGGAATGCCATATCGATAAAAGGTGAATATCGGATGCGGAGTCA
AACTCGTGAGTAGCGTTTGTTTATGTTGGTTGGTTGGTTGGTTGTTGTTGTATCAGTCCC
GTGCTAGTGGCTAAGGTGAACAGTTCGCTTTTATCAATACGGCACTATGGCTCTATGTAT
AAGTTGGCATAAATATTTTTTTTTTTATATTTTTTTTTTGTTTCATGTGTGTT
(2873 bp)

- SilkBase 1999-2023 -