SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25131_c2_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:18.60 TPM:17.22
ORF Entry
Sequence
(Nucleotide)
CGGCCACTCACCGCGCCCGCCCCGCCCCCCGCCGCACCCTTCGCCCCCACTAACGATGTG
CAGACCACAAGCAGTTCTCAGAAACCAGAGTTTAAAAGTCAAGCTGAAGAACGTCTCATA
CGAAAAATGGCTAAAATGGCATTAAACGGATATGAAATTGGCATTCAACGTAAAATAAAG
CCAGCCGACCACATCCAATCTATGGCTGATAAAATACAAGACACTGTCGTTACTAAGCAT
CCTCTGAATACCGATGGTTCGTCGGAGGAAAACATTCGTGAGAATAGTACTCTAAGAAAA
ATCTCCACTAACGACAACGTGTACAAAAATACAGAATTCGGTAGTATGAATGACAGAGTT
AAAGAGAGTAATTTCTTAAATGCAATAATTTTCAATGGAAGTACTCCAGTACCTCCGCCA
TTACCTACATCTCCTATACCCACTTTCAATATTCATAGTACACCTCTTGGAGAACCAATA
GTTACGGGTAATATCAAAAAACAATCTGATTTACCAAAAAATTTTAATATCGATTACGGC
CTAGATTTCCAGAATGAAACTTTGAACGGATCCTTAAATGACAATGATTTTAAAATAATT
GATGACCATAAAAACACAACTAACACTCTCAAAAAGACGAATGGTTTTCAAAATTCTTTC
CTGAACGGAATGAATTCCACCAAATCCGAAAAGAAACCAGATCAAAAGTTTGAAAATAAC
ATTTACTCTAATACATTGAATAAACGAAAATTATTTGAAAACAAAGATGATACTAACAAT
TTCAAACACTCGCCATGTGACTTAAAGAATGAAAAGAAAATCATTGACGTATATTCAAAA
GCAAATAATTCCAATCAATCTTTCAAGTTAGACGGTCACGACTTATCTAACACAACGGAA
GAGACAAAGCCGGCAGTTCTGCCGAGTTCCGTTAAAGAAAATTCATTAGTATATGACGCA
CATGATTCAGCAACTGTCACCGATGACCCTCCATCTAAAGTTTATGAAACCGATAATGAC
ACATTCTCCGAATCAAATACTTTAGAAAAAATAGTTAATAATACTGAGGACGTTGTTAGA
CGACGACAGAAAAAGAACATTAGGAATGATGACGGTAGAAGGGATTCTCATATCATCGCC
AGACCACTTAGTACTATGACTTCTGTAGATGTTGAAGAGGGAATGTATCCTGTATGTCAC
ATATGCGACAAGGCTATTACAAGAGGTCCATTCATCACGGCTCTTGGACGCATATGGTGC
CCCGAGCACTTCATCTGCGTGAATGCAACATGCAGACGTCCTCTACAGGATATCGGATTC
GTCGAAGAGAACGGACAGCTCTACTGTGAATTCTGTTTTGAGCAATACATAGCACCCGCC
TGTGACAAATGTCATGCTAAAATTAAAGGCGACTGTTTAAACGCCATCGGTAAACACTTC
CATCCAGAGTGCTTCAACTGCGTTTATTGCGGAAAGTTGTTCGGAAACAACCCGTTCTTC
TTAGAAGACGGACTGCCATACTGCGAAGCAGATTGGAATGAGCTCTTTACAACAAAATGT
TTCGCTTGCGGATTCCCCGTGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAAC
TACCACAGTCAGTGCTTCAACTGCACGGTGTGTAAAAAGAACCTCGAAGGACAGAGCTTC
TTCGCCAAGGGAGGTCGGCCTTTCTGTAAAACACACGCCCGTTAAAAGTCCAATAAAAAT
AATCTACAACTCGGACACTGTTTACTCGACTACTACTTTTCGTCCGGTTTCGCCGTTGCC
GATCACGCCGCCGGCGGTCGGTACGCCGTCGCCACAGAGAACTAGGAAGTTGGAAACACC
CCTCCACTTCGATGGAGGACTGTTTTCCGACATAAGAAGTACAGACGGAAAGTTACTTAG
CAAAGTAACGGTCGATAGGGTGCAGCGTTCCACACACCATGACGTCATCGACTCCCCGAG
TACTGTTGAGGTGCACGACAAAAATTACGTCGACGATATAATAAAATCCGAAACTATAAT
AAATCAAGACATAATAACGGTCAAATTCACTCCGGTCCCACCGGAATTCGATTCCCAAAT
GATAAGTCCGCAACTGGCCAAACGGTCCAAAACACCAATTCAATATCTCAAGGATGACTT
TGTTGATTTGCAAAGTTACAAAATTGTGAATTCTTTATGTAAAGAAAAACTATTAGAAGC
TAATGCTTTACGGACACAATCTGCACAAGATTTGATCACATTAGAACCAACTGAAGTCGA
AAGTAGTACTCTAGCCAAGTTTGTAAGGTCTGTGAGTCAACAAAAGCAAATTAGCTGCAG
TGACAGTGATCCAATGGGCCAAGAAATTAATTCGATACCAATTAAAATGGAGTCGGATTC
TTTAACAAGTTTAGTTGAGAAATCGATCAAAACTGGAACTGTGAGTGAAAATCGAGAGCT
CGATCACTTTTTGAATACGGACTTGTCAAAAATCGAGAGGAGCCTTAGTCCTTTGCCAAA
TTTCTCGATCACGGAACGTTTGACAAAAATTAACAGTTACTTGCAGGAGAGCCTTGACGT
CTGCAGTGGTAACGATAGCAATAATCGGTGCACTCCGTCCATTATACACGATAATGTGGA
AACGAAACATGAATACTTTAGTGAGGCATTTGATTGCGTAAATGTGCAGCAGAATATTCC
TGCAAATAGTGTTTTGGACAGTTCTCAAACGGAAGCAAATTCTGTTGATTCTCAGAACAA
TCGATCACTTACCGCACGCGAGAATTCTGAATATACAGACCCTAAGAAAAGTAAGTCCAC
ATTAAACAGTGTCCGCCGGGGACGCCCTTCGATTTTGAACGCTATATCAAACATGCCGAT
ACATTATCACGCAGCGATTTTGTGTATTTTCTTAATTGTATATAACCTTATATACCAATA
TATTAAATTAAATTGTCCAGGTAATAAAATATAATATAGGTTTTAAGATTGTTCAACGGA
ATTGTATGCGTTAAACTAGTCATTGCAAAACTATTCATACGTGTTATATCTATTAGCAAA
TGTATTAATTTTAGATCAGGATGTAAATAGTCACATAACAGCTCCCGCGTTATAATTTAA
CTAAATTTATCTAAAATTAACATTATGGCGCTTTTCTCACAATTGTGACGATTGACAATC
CCTTCATATAAGCTTTGTAAACAGCTTCGGAATGTTTAAAAAATATATACTAACTTTAAC
ATCTGTAAGTTTATTACATTTTTTTTACAATTCATAATTTATTTATTGGTGCACCAATCT
CATTTTGAAATTCATATTATCATCAATGGAATTGTTCTATCGAAATTTATGGCTACGATG
CCTACTTGTAACGAATTTTAAGAATTAAATTAAATTTATCAAACAACTGTTGTCCGACAG
TTACTGTCCTAGAGTACCTAATCCTAAGTACATTATATACTTTTTATATGAATTTAGATA
TACAAACTTTACAGCATTATCTATCACATTTTATGATTATGTGAG
(3525 bp)

- SilkBase 1999-2023 -