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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25131_c2_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_PDZ_and_LIM_domain_protein_Zasp-like_[Papilio_xuthus]
Ontology
GO:0001725 C stress fiber
GO:0001952 P regulation of cell-matrix adhesion
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005915 C zonula adherens
GO:0005925 C focal adhesion
GO:0005927 C muscle tendon junction
GO:0008270 F zinc ion binding
GO:0015629 C actin cytoskeleton
GO:0016323 C basolateral plasma membrane
GO:0030018 C Z disc
GO:0030239 P myofibril assembly
GO:0031252 C cell leading edge
GO:0045177 C apical part of cell
GO:0045178 C basal part of cell
GO:0046872 F metal ion binding
GO:0051371 F muscle alpha-actinin binding
GO:0061061 P muscle structure development
Transcript
Level		FPKM:0.98 TPM:0.91
ORF Entry
Sequence
(Nucleotide)
ACCTACCCAAGAAATGTTATCTGTCAATTCATCTAATTATCTTAATAACGAAAATAATGC
AACTGCTAGTAGAAACACAGGCATTTATAAGCCAAAACCTTTGAATTCTGGTGCTAACCA
AGGTCCAGTGTGTGATCCTACCCCGTCAACAGGTTCCAGTGTAGGAGCTGCCACACGTGG
TAAAACTTTTGGGGTATCATCGGCACCAAAACGAGGAAGGGGAATATTGAATAAGCCTGC
CCTGCCCGGCTCTCGTGTGCCACTTTGCGCATCTTGTAATGGAAACATTAGGTGATTCAG
TGTGGAAAATTGACGCACTTGATTGTTGTGTGATGCATGAATATTATCGAGACAAGATAA
CTTTAGCGAGTGTATAATGTCAGGCATAAACTATTTCTCTAACCATAACCATAGCAACTT
TTCCTACGTTATTTGCGTTAGTCTTACTTATTAAATATCGCACGTATTAAAACTAAAATG
CTTATGTGTTTTTGATTGTTTTCCTAACAGCTAACGATGTGCAGACCACAAGCAGTTCTC
AGAAACCAGAGTTTAAAAGTCAAGCTGAAGAACGTCTCATACGAAAAATGGCTAAAATGG
CATTAAACGGATATGAAATTGGCATTCAACGTAAAATAAAGCCAGCCGACCACATCCAAT
CTATGGCTGATAAAATACAAGACACTGTCGTTACTAAGCATCCTCTGAATACCGATGGTT
CGTCGGAGGAAAACATTCGTGAGAATAGTACTCTAAGAAAAATCTCCACTAACGACAACG
TGTACAAAAATACAGAATTCGGTAGTATGAATGACAGAGTTAAAGAGAGTAATTTCTTAA
ATGCAATAATTTTCAATGGAAGTACTCCAGTACCTCCGCCATTACCTACATCTCCTATAC
CCACTTTCAATATTCATAGTACACCTCTTGGAGAACCAATAGTTACGGGTAATATCAAAA
AACAATCTGATTTACCAAAAAATTTTAATATCGATTACGGCCTAGATTTCCAGAATGAAA
CTTTGAACGGATCCTTAAATGACAATGATTTTAAAATAATTGATGACCATAAAAACACAA
CTAACACTCTCAAAAAGACGAATGGTTTTCAAAATTCTTTCCTGAACGGAATGAATTCCA
CCAAATCCGAAAAGAAACCAGATCAAAAGTTTGAAAATAACATTTACTCTAATACATTGA
ATAAACGAAAATTATTTGAAAACAAAGATGATACTAACAATTTCAAACACTCGCCATGTG
ACTTAAAGAATGAAAAGAAAATCATTGACGTATATTCAAAAGCAAATAATTCCAATCAAT
CTTTCAAGTTAGACGGTCACGACTTATCTAACACAACGGAAGAGACAAAGCCGGCAGTTC
TGCCGAGTTCCGTTAAAGAAAATTCATTAGTATATGACGCACATGATTCAGCAACTGTCA
CCGATGACCCTCCATCTAAAGTTTATGAAACCGATAATGACACATTCTCCGAATCAAATA
CTTTAGAAAAAATAGTTAATAATACTGAGGACGTTGTTAGACGACGACAGAAAAAGAACA
TTAGGAATGATGACGGTAGAAGGGATTCTCATATCATCGCCAGACCACTTAGTACTATGA
CTTCTGTAGATGTTGAAGAGGGAATGTATCCTGTATGTCACATATGCGACAAGGCTATTA
CAAGAGGTCCATTCATCACGGCTCTTGGACGCATATGGTGCCCCGAGCACTTCATCTGCG
TGAATGCAACATGCAGACGTCCTCTACAGGATATCGGATTCGTCGAAGAGAACGGACAGC
TCTACTGTGAATTCTGTTTTGAGCAATACATAGCACCCGCCTGTGACAAATGTCATGCTA
AAATTAAAGGCGACTGTTTAAACGCCATCGGTAAACACTTCCATCCAGAGTGCTTCAACT
GCGTTTATTGCGGAAAGTTGTTCGGAAACAACCCGTTCTTCTTAGAAGACGGACTGCCAT
ACTGCGAAGCAGATTGGAATGAGCTCTTTACAACAAAATGTTTCGCTTGCGGATTCCCCG
TGGAGGCGGGCGACAGGTGGGTCGAGGCGCTCAACAATAACTACCACAGTCAGTGCTTCA
ACTGCACGGTGTGTAAAAAGAACCTCGAAGGACAGAGCTTCTTCGCCAAGGGAGGTCGGC
CTTTCTGTAAAACACACGCCCGTTAAAAGTCCAATAAAAATAATCTACAACTCGGACACT
GTTTACTCGACTACTACTTTTCGTCCGGTTTCGCCGTTGCCGATCACGCCGCCGGCGGTC
GGTACGCCGTCGCCACAGAGAACTAGGAAGTTGGAAACACCCCTCCACTTCGATGGAGGA
CTGTTTTCCGACATAAGAAGTACAGACGGAAAGTTACTTAGCAAAGTAACGGTCGATAGG
GTGCAGCGTTCCACACACCATGACGTCATCGACTCCCCGAGTACTGTTGAGGTGCACGAC
AAAAATTACGTCGACGATATAATAAAATCCGAAACTATAATAAATCAAGACATAATAACG
GTCAAATTCACTCCGGTCCCACCGGAATTCGATTCCCAAATGATAAGTCCGCAACTGGCC
AAACGGTCCAAAACACCAATTCAATATCTCAAGGATGACTTTGTTGATTTGCAAAGTTAC
AAAATTGTGAATTCTTTATGTAAAGAAAAACTATTAGAAGCTAATGCTTTACGGACACAA
TCTGCACAAGATTTGATCACATTAGAACCAACTGAAGTCGAAAGTAGTACTCTAGCCAAG
TTTGTAAGGTCTGTGAGTCAACAAAAGCAAATTAGCTGCAGTGACAGTGATCCAATGGGC
CAAGAAATTAATTCGATACCAATTAAAATGGAGTCGGATTCTTTAACAAGTTTAGTTGAG
AAATCGATCAAAACTGGAACTGTGAGTGAAAATCGAGAGCTCGATCACTTTTTGAATACG
GACTTGTCAAAAATCGAGAGGAGCCTTAGTCCTTTGCCAAATTTCTCGATCACGGAACGT
TTGACAAAAATTAACAGTTACTTGCAGGAGAGCCTTGACGTCTGCAGTGGTAACGATAGC
AATAATCGGTGCACTCCGTCCATTATACACGATAATGTGGAAACGAAACATGAATACTTT
AGTGAGGCATTTGATTGCGTAAATGTGCAGCAGAATATTCCTGCAAATAGTGTTTTGGAC
AGTTCTCAAACGGAAGCAAATTCTGTTGATTCTCAGAACAATCGATCACTTACCGCACGC
GAGAATTCTGAATATACAGACCCTAAGAAAAGTAAGTCCACATTAAACAGTGTCCGCCGG
GGACGCCCTTCGATTTTGAACGCTATATCAAACATGCCGATACATTATCACGCAGCGATT
TTGTGTATTTTCTTAATTGTATATAACCTTATATACCAATATATTAAATTAAATTGTCCA
GGTAATAAAATATAATATAGGTTTTAAGATTGTTCAACGGAATTGTATGCGTTAAACTAG
TCATTGCAAAACTATTCATACGTGTTATATCTATTAGCAAATGTATTAATTTTAGATCAG
GATGTAAATAGTCACATAACAGCTCCCGCGTTATAATTTAACTAAATTTATCTAAAATTA
ACATTATGGCGCTTTTCTCACAATTGTGACGATTGACAATCCCTTCATATAAGCTTTGTA
AACAGCTTCGGAATGTTTAAAAAATATATACTAACTTTAACATCTGTAAGTTTATTACAT
TTTTTTTACAATTCATAATTTATTTATTGGTGCACCAATCTCATTTTGAAATTCATATTA
TCATCAATGGAATTGTTCTATCGAAATTTATGGCTACGATGCCTACTTGTAACGAATTTT
AAGAATTAAATTAAATTTATCAAACAACTGTTGTCCGACAGTTACTGTCCTAGAGTACCT
AATCCTAAGTACATTATATACTTTTTATATGAATTTAGATATACAAACTTTACAGCATTA
TCTATCACATTTTATGATTATGTGAG
(3986 bp)

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