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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25107_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_5-methylcytosine_rRNA_methyltransferase_NSUN4_[Amyelois_transitella]
Ontology
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0030488 P tRNA methylation
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
Transcript
Level		FPKM:4.61 TPM:4.27
ORF Entry
Sequence
(Nucleotide)
CGGAAAGCGACGGAGTCACGAGCTGCCCGTACTTGGGGGCCGCAGCGCCCGCGCCCAGCG
TCAGGGTGCTGCTGAGGCCGGCGACCGCTGGAGTTAAATCTATGACGGTGGCGATGATGT
CGTTGCTCTCGAAGACTTGCTTCAAAGCCATGTGCACCACTCCGTCGTTCTGTATGGGGC
TGAGGGAGCACGTGGAGTACACGACCGTCCCCCCGACCTTCGTTAAGCGAAGTGCATTAG
CCAACAAGTGCGATTGCAGCTCCGGTATCTTGAGCCTCTCCTTCACCCGGTCCGGCCTGA
AGATGTTGTTGTCATCTTCGGTCACAGAGTGTCGGTCCGTAGTGCACGGCACGTCCACTA
GAACCTTATCGAAGCCGTGGTCGTCCGTGAACATTCTGCCGTCGACCCTTTTGAAAATGA
CGCGTTCCCGCCACTTGTTACCCGACTCGAAATCGAACAGATAGTCGCTGAACATCCTTT
GTGTTCTGTTCGATCTAGATATAGACACGTCGTTACATATGACCACGTCCGGTAACAAGG
TCTGCAGCGCGACCAGCGCCTTGCCCCCGGGAGCAGAGCACAGGTCCAGCACCCTGTCGC
CGGCTCTCAACCCCAAGGCTAGCACGGCCAACACGCTGCCACAGTCCATGGGATAGTAGT
TAAACACGCCTGTTTGTGATCTCTTCGGTTCGGGGAACATTTTAAGTTCACTGTCCATTT
CATAAGTGATCACTTTCAGGTGTTCCGGGTACTGCAATTCAGTCTCGGGTTCGATTGTTA
AGGGGAAATCAATTATTTTTGAATAATAAGAATAGTGTGTAGACTCTGGTACCCAGTCAT
TCATGCCTTTAAGTTTAGTTGCTGGTAAATACTGATACAACGCTTCTGAGGTCAAGCCTA
TAGATGGGTCAATCATTCGAGACTCATCTATGACAGCATCTGCTATCGCCTGATCTAATG
ATTTGTTTATTGGTTCCTTCTGCTCCTTTATTTCCTTTCTTTCAGAAATTTGATCATTGT
CTTTGAAATCGAGTCTTTCAGGCTTATTATCAGTATTTGGGTAAATACTGGATATTTCAT
CAGAATGTGATTTCTCTGCTAATTGCTGTAATTTGTTTATGTACAATGGTGCTTCTTGAT
CAGAGGTTGATGTGTTCACAGAATATTGTTTATGAAAATCTTCCTGTACCGTTATTAGTT
TCTTTAGGCAATGTGCACCCCTATTCGTGAGATACTCCATAGTCTCTTCAGCGTCTCCGT
AATTGTTGATCACGGCTACATATTTCGGGCCTTGTAATAATGCTCGTTTCATGGGATCCC
ATTTCTTACCGAAAACGGACCCGTAAAATTCATCAAAATGATTCATTGCCTTGTATTTAG
GGCCGGTCTTTTTTCTTAACTTTGCCCAATGAGTTTTAGATTTATGTCGAGATTGTCTTA
ATAAGTGAGCACAAGTTATAGGCCCTTTCTTGATCAAATTTGTTATTTGAAGCATTTTTA
ATACTTAGTTATTCCTTTCGTGACTGAATGATTTTTAGGTTAGGGAAACCTAATATTTAC
AACTTTTCTTGATATTTTCTTCTTTGACCAGCCGTTTTGTTTTGTT
(1606 bp)

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