| Name | A_BomaMG_comp25098_c0_seq1 |
| Scaffold_id | |
NCBI non-redundant
(nr) | hypothetical_protein_KGM_04296_[Danaus_plexippus] |
| Ontology |
| GO:0000375 |
P |
RNA splicing, via transesterification reactions |
| GO:0000389 |
P |
mRNA 3'-splice site recognition |
| GO:0000398 |
P |
mRNA splicing, via spliceosome |
| GO:0003676 |
F |
nucleic acid binding |
| GO:0003723 |
F |
RNA binding |
| GO:0005515 |
F |
protein binding |
| GO:0005634 |
C |
nucleus |
| GO:0005654 |
C |
nucleoplasm |
| GO:0005681 |
C |
spliceosomal complex |
| GO:0006397 |
P |
mRNA processing |
| GO:0008270 |
F |
zinc ion binding |
| GO:0008380 |
P |
RNA splicing |
| GO:0016607 |
C |
nuclear speck |
| GO:0044822 |
F |
RNA binding |
| GO:0046872 |
F |
metal ion binding |
| GO:0071013 |
C |
catalytic step 2 spliceosome |
|
Transcript
Level | FPKM:11.92 TPM:11.04 |
| ORF Entry | |
Sequence
(Nucleotide) | GCTAACAACATCTATACACGCAATATTTATTTCATACGAATCATAAAAATAAGAACCATG
AAAAAACTCCTTATAGAAGTCCTTGGCGTTTTAAATCTTCGAAAGTCTTACGATTTACAA
CATTGCCTTGAGAATCTTCAAATTCTTCATCATTCTCTGCCACGAAACGTTCAGTTTCTT
TCTGTTGTTTAATTTTCTCCCACAAAGCAAGGGCATCTTCAATTTGTGTGACATTGGCAA
AATGAGCCGTATTCGGTATTCCAAGACATCGCATTCCGTGAGCGTGTCTCCACTCCGCAA
AATGTCTCTGAAACGCTTTCGGTCCCTTGTATGTATAGTTCCCGCAAATTTCGCAATTGT
AGCTTATGTTGAGACCGTGTAACTTGTATAACCAATATGGAATAGGCTTTCCATCCCATC
CCAGTGGCAAATTCTTGGGATTATATGGCACTTCATCATCATCTGAATCAAGGTCTGGTG
CTGCAGAAGCATCACTTTCGTCACCGCTTTCGTCGCGACGTTCACCAGCAGCTCTTGCAG
CACGACGCGTTACATTTTCAATAGTTGATGCTCGTGTACTGCTTATTATAGTCGCGAACC
TATAAACCTGTGCTTCAATTGCAGCAATGTCTTTTTGTCTTTGTTGTGTGGTAGCCTTTG
CCTTATTTCCCTTTTTCGCAACAAGAGACTTGTCAAGGGCTGTTTGACCTTTAGTGCTAA
ACAACCTCTGTGCTCTTTCTTCCAAAGTTCCACCACATTTTAAGCCGAGAGCCATAAGAG
CTGATTTTAATCTGTCCAGGCCAAGAGACGCCAACTCTTCCCATGATGAAAAAGCCGACA
GATCTAAATGCGCCCCCACATTTGTTAAAGCTCCACCAGTTTCTTTAGGCCATCCTGGAA
ATGTACCAGACTCCCATTGTTTTAAAAACTCCTGATGCCCTAGAGCCATTTCTTGAGCCT
GATCCAAAAGAGGTTTAACTCTGGACACAAAATCTTTCATATAAGTGAGCAATGCACGAA
TGTAATTCCTGTATTCACTATTCTTCCTTTCACGAGGTATGTCAAAGAGATGATCAAATA
TGCTCAAGTATGTAATATAATCTACTTTCTCAATACCTTTCAAGTTAATGTACTTTTCAT
AACACGAATGTAGGTCCAAATACTTTCCATAGCCTTCTTCATCAGTGAACTCGACAGGAA
CTGTGTAATCCTCAGCAGGATTTTCCCTTTGATTTGCCAACTCTTCAAATTCTACAGACA
TGGGTACAGATATTTCATTTGGATGTTTTCTATGAAACTCTTTAATTTGCTTAAGTCTCG
AATAGAACTCCTGGAACTCATGTGGACCTGACAATGCTGATATTTCTTCTTTTCGTAATC
CATCTTTATCTTCATACAATTCTTTAAGTCTTATAGAGGCTTCAATATATCTATCATGTA
AATTCTTCAAACGATGATCAGCATTTATAGTCTCCCGATGCCCAGTTTTTTTGTGAAGAA
TTTCTTTGACCATTGCGTCCATGGTTCTTTCCCTTTCCTCATGGTAGCTTCGTTGTTGCT
CTAAAATTGTTTCCATTTTTAAAGGTTATAGAAATTGTTTTATGTCAATCACCTTGTAAA
ATACAATAATATTAAAATAATGATTAATGATTTTGAAGTTTAAATTATGTGAGAAAATAT
ATGGTAGCATACAAAATATGCTTCAACTCAGTTGAATCAACTGTATTAAATTTACGTTAC
TGAGTATTGAAATCAATATTTTAGATAATAACAATAATGAAGAATCAAATCATCAACGTT
TTTTAGATATATTTTATTCATTGAAGTAGTATGTTTGATTCTAATGTATACGTAAACCAT
AGATACAGTGTGACCATCTCTT
(1882 bp) |
