SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp25085_c1_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_alpha-actinin,_sarcomeric_isoform_X3_[Bombyx_mori]
Ontology
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007629 P flight behavior
GO:0030018 C Z disc
GO:0031532 P actin cytoskeleton reorganization
GO:0045214 P sarcomere organization
GO:0046872 F metal ion binding
GO:0051017 P actin filament bundle assembly
Transcript
Level		FPKM:5.77 TPM:5.34
ORF Entry
Sequence
(Nucleotide)
CTTTTGTATGTGTAAGTAACGTGAACCAACCAGCTAATGAGAGAGAAACGTACATTCACA
GCATGGTGCAACAGCCACCTCAGAAAAGCTGGCACCGGCATCGAGAACATCGAGGACGAC
TTCCGCAATGGCCTGAAGCTCATGCTGCTGCTGGAGGTCATCTCCGGCGAGACTCTGCCC
AAGCCCGACCGTGGCAAAATGCGATTCCACAAAATCGCTAACGTCAACAAGGCACTCGAC
TTCATCGCCTCAAAAGGTGTGAAGCTTGTGTCAATTGGTGCCGAAGAAATCGTCGATGGT
AACCTTAAGATGACTCTTGGTATGATTTGGACCATTATTCTCCGCTTCGCCATCCAAGAC
ATCTCAGTTGAAGAAATGACCGCAAAGGAAGGTCTGTTGCTCTGGTGTCAACGTAAGACA
GCGCCGTACAAGAATGTCAATGTCCAGAACTTCCACCTGTCGTTCAAGGACGGTCTGGCC
TTCTGTGCCCTCATTCACAGGCACAGGCCAGACCTCATCGACTACAGTAAACTCTCCAAG
GACAATCCCCTCGAGAACTTGAACACCGCTTTCGACGTAGCCGAGAAATATCTCGACATC
CCCCGCATGTTAGACCCTGACGATCTGCAGAACACGGCGATGCCGGACGAGAGAGCCGTC
ATGACTTACGTCTCCTCGTACTACCATTGCTTCTCTGGGGCGCAAAAGGCTGAAACGGCC
GCGAACCGTATTTGCAAAGTTCTCAAAGTCAACCAGGAGAACGAACGCCTAATGGAAGAG
TACGAACGTCTTGCCAGTGACCTCTTGGACTGGATCCGTCGCACCATGCCATGGCTGAAC
AGCCGTCAGACCGACAACTCTCTTGCCGGGTGCCAAAAAAAACTGGAAGACTACCGTACT
TACAGGCGTAAGCACAAGCCACCACGTGTAGAACAGAAGGCCAAACTGGAGACCAACTTC
AACACCCTTCAGACCAAGCTTAGGTTGAGCAACCGTCCTGCGTACATGCCCACCGAAGGC
AAGATGGTTTCTGACATCGCTCAAGCATGGAAGGGCCTAGAGATCGCCGAGAAGGCATTC
GAGGAATGGCTTCTCAGTGAAATGATGCGTCTCGAGCGACTCGAATACCTCGCTCAGAAG
TTCAAGCACAAGGCCGACATCCATGAAGACTGGACTAGAGGCAAGGAAGAGATGCTACAG
TCCCAGGACTTCCGTCAATGTAAGCTCAACGACATCAAAGCTCTCAAGAAGAAGCACGAG
GCCTTCGAATCCGATCTGGCCGCCCACCAAGATCGTGTCGAGCAAATCGCGGCCATCGCC
CAGGAACTCAACACCCTGGAGTACCACGAGGTGGCGAGCGTGAACGCGCGTTGTCAGCGC
ATCTGCTCGCAGTGGGACCGGCTCGGCGCGCTCACGCAGCGCCGCCGGCACGCACTTGAC
GACGCCGAGCGCGTGCTCGAGCAGATCGACCTGCTGCATCTCGAATTCGCCAAACGCGCT
GCACCATTCAACAACTGGTTGGACGGAACTCGCGAAGATCTCGTGGATATGTTCATCGTT
CATACCATCGAAGAAATCTCAGGTCTCATGGACGCTCACGCTCGCTTCAAGGCAACCCTC
GGCGAGGCTGACAAAGAATACCAGGCTATCGTCAACCTGGTACATCAAGTCGAATCTATT
GTCAAGCAGCACCAGATCCCCGGCGGTTTGGAGAACCCATACACCACTCTCACAGCTCAT
GAGTTGAACCGCAAGTGGTCGGACGTGAGGCAGCTGGTGCCGCAGCGCGACGCGACGCTG
GCCGCAGAGCTTCGCAAGCAACAGAACAACGAGAACCTGCGAAGGCAGTTCGCAGAAAAG
GCCAACGCAGTCGGACCTTGGATCGAGAGGCAAATGGACGCCGTCACCGCCATCGGAATG
GGTCTGCAGGGCTCTCTGGAAGACCAGCTGCGTAGACTTAAAGAGTACGAAGCTGGAGTG
TACGCTTACAAGCCACACATTGAGGAACTCGAACGCATCCACCAGGCTGTCCAGGAAGGC
ATGATCTTCGAAAACAGATATTCACAATACACAATGGAGACTCTGCGCGTCGGCTGGGAA
CAGCTCCTGACCTCGATCAACCGCACCATCAACGAAGTGGAGAACCAGATCCTCACCCGC
GACTCCAAGGGTATCACTCAGGAGCAACTGACAGAGTTCCGCGCCTCATTCAACCACTTC
GACAAGAACCGCACAGGCCGTCTGCTGCCAGAGGAGTTGAAATCGTGCTTAGTCTCCCTG
GGTTACAGCATCGGCAAGGACAGGCAAGGAGAACTCGACTTCCAACGTATTCTTGCTGTT
GTCGATCCCAACAATACCGGCTACGTGTCATTCGACTCGTTCCTGGACTTTATGACCAGA
GAGTCGACGGATACCGACACCGCCGAACAAGTCATTGACAGCTTCAGGATCTTAGCTGGT
GACAAGCCGTACATAACGGCGGAGGAGTTGCGCCGCGAGCTGCCGCCCGACCAGGCGGAG
TACTGCGTGGCGCGCATGCCGCCGTACCGCGGGCCCGGCGCGCCGCCCGGCTCCCTCGAC
TACATGGCCTTCTCCACCGCACTCTACGGCGAAACCGACCTCTAAGATGCAGAGAGAAGG
GGCCATATCAAAGGATATCATCTTCAGCCGTGTCATCAATCAGAGAAGGCATAAAATGAG
AAGACCCAAGTCACATAGTCATTCAAATACATTAAAGAGTGCCAGAGAAGCGACAATGGC
GAAATAAAATAAATTAAAAACTTTTTCCTACACTGACCAGACCTATTCACGCCCTAAATA
CTATGGTCAATGCAGAGTAAAAATGTTTTTAAAGTAACCATGCAGTTCTTTAAATATCAT
GTGCAATGTACAAACCAAAAATGCCATTCATTTTTGTTCAGTAATGTTAACCTTTGGCTC
AAATTGGAGAAATCATTTATATTGTTTAAATCTCTCTATTTATATCATAGCATTAGATAT
TTTTTAACTTTTATATGAAATTCTCAGCAGTCACAAAATTATTTGTAAGATAAAATGGTG
CTAATGTTAGGCTTGACTAATGTGTGACACCAAATTAAGACTCATTCACATTGTGAGAAT
GTTTTTGTTATTTTATTTTAAGTTTATTTATACAAGTTTCATTTTTATAACTACCATTAA
AAATATGTTTTATTTCAAAGGTAGCAAAACTAAAATTTACTAAATTCTTAAGTGCAGGGA
AGTGTCACACAAATTATTTATATCATAGATTGCCATAACTTGCCTGCATCAATTTATTTA
TCTTTTTTTATATATTTATTGTCGTTTGTGAGAGTATTTTTGAATGAGTACTCGTAAATA
AATGATCTGCCATATTTTCGTCTTTTAATATTGACTACATTGTTAATCCAACCAATTTAT
TTTACATGGAGTATGGTACTTAGATTAAGAAAAAATTATTATGTGCCCAAAAAGTATACT
AACTCGAATGTACAGCTAATTATTAAATAAAGAGCTCTTAAACTTGCATTACTTTATTTC
ACAATAACTACCTAAAACTAAGCAATAACTATTACAACAAAATTATTAAAACAACACAAA
TAATATAAGGACTTGGGCTTTCAAAAACAAAAAATCGTCACACTTTAACAAATTCTTATT
ACATCAGAGATTTCTTCATAAATACTTAAATTTTAACAATTATGTCTTTGTTTCTATACA
GTACCACCACTTAAAATGAATTAAAACAATAATTTCTAATACAAATAGAAAACTACAAAA
TCAAATACATAATACCTGAGATGGGTATTTTAATTTTTCTTCTCCCCTTGCTTTGCCTCT
TCAGCTGTTAAAAGTGCACTTTTTATACCCACTTTCTTCAGTTCCTCAATGAGTTCACCA
GATTGGTGCATCTGCAGCATTATGTCACAACCACCAACAAATTCACCATTGATAAAGACT
TGAGGTATTGTAGGCCAATTCGAATAATCTTTTATACCTTGTCTAAGATTTTCATCACTC
AACACATCATGGCTCTCGTACGGAACTGCATGCATCCTCATAATCTGAACAACAGCATTA
CTGAATCCGCATCTTGGCGCGTCCGGTACGCCTTTCATAAACACCACGACTTTGTTATTT
TTTACTATTTTTTCAATTTTGTCATTTATTCCAGCTTCTGAAAATGCGCGACAGGATATC
TTCAATGTGGTATTAAATGCTTGAAAACTTCTTCTGACTAAGGTGTTCATGTTAACACAG
ATATATTCTAGTTTTTAATATTAGATATGAACGCAGTTTTTCTTTGACGAATTTTATAAA
GCTAAAATTTCAGACAGCCAATAACCAATATCATCACTAAGG
(4362 bp)

- SilkBase 1999-2023 -