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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24935_c1_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_isoform_X2_[Papilio_machaon]
Ontology
GO:0004559 F alpha-mannosidase activity
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0009311 P oligosaccharide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
Transcript
Level		FPKM:5.77 TPM:5.34
ORF Entry
Sequence
(Nucleotide)
TGGATACAGCTTACATAATGGGACTAACTGATGTATTTGAGGAAGGCAAGCAATGGATCA
AAGAAGAACTAATATTCACAAAAAATAAAGATGTTAATTTCTTTGAAGTCACCATTAGAA
TACTAGGTGGCTTGTTAACAAATCATTATTTCACTCAAGACCAGCTATTTCTTGATAAAG
CTATTGACCTCGGAGACCGTCTCATGGCAGCATTTTCGTCACCATCTGGCATCCCATATT
CTGATGTGAACTTGGGAGCTAGAACTGCTCATGCTCCTGAATGGTCACACTACAGCACCA
CAGCTGAAGTTACTACTGTGCAGTTGGAGTTTAGGCAACTGTCCAGAGCTAGTGGCAACC
CTATATTCGAGGAGGCAGCAGCAGCCGTTTCCGAGAAGATTCATCAGCTACCAAAAAAAC
ATGGACTTGTTCCAATATTTATTAATCCGAATACAGGACATTTTCTGCCTCACGCCACCA
TCACTCTCGGAGCAAGAGGGGATAGTTATTATGAATACCTGCTAAAACAATGGCTCCAGA
CTGGGAAAACAATCAACTATTTACTGGATGATTATTTAACGGGCATAGAAGGTGTACGTG
AATTTTTGGCAAAACGTTCATCACCTAATAAACGATTGTTCATCGGGGAGTTGTCTGCTG
GTTCAGAGGCTTTCAATCCGAAAATGGATCATTTGACCTGTTTCTTGCCTGGAACATTGG
CCTTAGGTCATTTGAATGGCCTCCCCGACTGGCACATGACAATGGCCGAGGAACTTCTCT
ACACTTGCTATTTAACTTATGCTGCACATCCAACGTTTTTAGCTCCAGAAATAACACATT
TCAATCTCGCGAGCACAACAGATGATATGTATACGAAATCGGCCGATGCTCACAGCTTAT
TGCGACCGGAATTTATTGAGAGTTTATGGTATATGTATCAAATAACTGGCAATACTACCT
ATCAAGAATGGGGCTGGCAGATATTCCAGGGCTTCGAAAAATATGCCAAAGTGCCAAACG
GCTATTCGTCTTTAACAAACGTGAAATCTGAAAACCCAATACCACGTGACATGATGGAAT
CTTTCTTTCTGTCAGAAACACTTAAGTACTTGTACTTATTATTGAGTGACGATCGCTTTC
TCATCGATTTGAATAAGTATGTCGTCAATTCGGAAGCGCACCCTTTACCTATACATAAAA
ATTAGTGAGATTTAAAGTAATAATAATACGTTAATGTTTATTTAACATAAGACGTATTCG
TTAAATCTCATGATTTATTAGAATAAGTCGCAATTAGCCAAATATGCCGCACTTTTTTTC
TCAACTAATATATCTGTATATTTATTTTCAAATGAGCACTATCATACTTAAAATTCATTC
ATCATTCGAGTAATAACTGCAGGATTCAGTAATTTTCAGTAAAGTTGAATTTGTTGACGG
ACTCGTCACTAAACATTTAGAATTTAAAGCTGTGATCATACGCGAATTACAATCAGTATT
TATATTCTGACGTGCCTGTTACTTAAATGCCTTATACGTTAAGGGAGGGAGAACGAGCTA
AAGTTATCACTGGATGTTAGTTTGAGCGGAATTAGTCAAATTATTATTAATGCGTGACGG
GTGCGTTAAGGTTTTATTTTAACAGTAGGTACAATTTACAATTTTGACATATTAAAATTG
TCTTTCCATAAAATTTGACAGTTAAACAGTTTTACGCACAATGAACTAACTCCCTTCGAT
TTCTCCTTAAAAACATACTTCTGATTTTTCAATAAACAGTCTTACCGTCAAATTATTATA
TATTTAATTGTATTCCATAATTGTTTAGGGTTTGTGTGGCGGTAGTTTAAAAAAGCTTCG
TGATTGAACATCCGTATCACGAATGTTTGTGTTCATTGAATTCTCTTCTAAAAGCAATTT
ATTATGTACTTACTAGATTTAATATTATATTAAATAATATTATTTATTATGTAATAATTA
AATTAAATTAAATACGTAAGTATAGTACTTATTTTGACTCGATTCGTGAATGTATTTGTT
GCATATGCATGTGTTGTTTGTAATTATATTATAAAAAAACCGATACATGATAATTTCAAG
CAATATCGTAAAGATTAAGTCGAAAAGTCCATGGTTACGCGCCAAAAAATTCGTAAGAAT
ATTAAGAAGGCTAGAAAAAACATGCTGTTTTTCGTGATATAAAACCAGTGAGATTTTTCT
ATTTAAATTTAAGCTAGTTTGCTAGCGAATGCCACTAGATGAAAAATAGGACGTACCGTT
TTATTCGTCAAATCGAATTTGTGCCACAGTTGCTGTAATTGAATAACATATATCACATTA
CATAAATTGGAACAATTTTATTTACAGAGTACAGCAATGCACAAAAGTATTACAGTATTT
TATGGGGAGACTCGTTCTTTTTAAATATACGTTTTGAATAATTTTT
(2446 bp)

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