| Name | A_BomaMG_comp24920_c0_seq4 |
| Scaffold_id | |
NCBI non-redundant
(nr) | PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori] |
| Ontology |
| GO:0000184 |
P |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
| GO:0003674 |
F |
molecular_function |
| GO:0003723 |
F |
RNA binding |
| GO:0005737 |
C |
cytoplasm |
| GO:0006417 |
P |
regulation of translation |
| GO:0006446 |
P |
regulation of translational initiation |
| GO:0048471 |
C |
perinuclear region of cytoplasm |
|
Transcript
Level | FPKM:1.86 TPM:1.72 |
| ORF Entry | |
Sequence
(Nucleotide) | AACCGCCCGGGCGGGCGCCACACGACCGGAATCTGCGCGAGCGACGAGCGGTGCCAACGA
ATATAAATTTCAGTGAAATAAAACACGCATCCGCGTACCGCTGTAACGTAAAATGCGAGC
GCAAGATTCTGTGAATCAAATACGAGAAAAGTGAACGAGCCTCGAGTGCAGAGTACGACG
CCACACGTCGCACTACGAGAGAGCGATTAGGGTTTATATAACTCCAACGACGAAAACGAT
TCGAGCTTCGTGCTGCAGAAACTCTCAGCCCCTCGAAATATTGTATAGAATCGCTCGGTG
ACTGCCAGGCATTGACACATCACTGCACTGCTCTTGTATGATAAACGTCTTAGAAATAAA
AGATTTAAAAAAAAAAACGAAAAAAATAATATAATACGAACTAACGCCCTCTCGGTGGCC
ACGAAGAGGGATATTTATTATACTTTATTATTATTATTATTATATATGCATATATAAATC
GGAGAAAAGTGATCTCTAAAGTGACGTCACAATATTAATCTAATTGTGATCTTGTTAATT
AGTTAGCCGTGTCGCATTTCGTATTGCCCGTATTTATTGTAGTTAATATTCTTTTATTAC
GTTGTAAATATCAACAATATTTATATGTTACATGTGACATCGCGTTATACTATAATACTA
GTCATCGATCTAGTGTGTGTTTATTGTAAAATCAGAATTTAATTGTTACTAAAAAATATA
TTTACGAAACATCAGTCGAGTGCACTGAAGGCAAGAAGGGAATTCGTGTTTGAGAGCAAG
TTACGTAACTGTCAAGATGCAGACTCAATTAGGATCAGGCAATGATCTGCAGAGGAGCTA
CAGGATCCAGGACTTCGCCACGCCTGGCGTCATCATGAGGGAGCGGAGCTTCGTACGCCC
CCAGTCGCATCACAACATGCATCATCACCAGTTTTCAAATAATGGGAAACGACGGAGTAT
GATCCTCACCAACGCAAAGGGAAAACCGACTCTAGAAATCTACAGGCCACCAGACGGCGT
GGTGTCAACGAACGCTGGTGCCGCCTGTACGACCACCACGGCTGCCGGCAGTGGTGCTGC
GGCCACCAACAAGCTGAATGTGCACGCAAAGGAGTTCACAATGGCGAAACCGATTGACCT
ACACAATAGAGGGGCATTGGGCGTGGGGTACGCTAGTGTGGGACTTCAGCACTCCAGGTC
GGCGGTGCTGCACGCGCAGGTGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCT
CCTCAATAGCGCCTCCAGCGGGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAA
GCTGCAACCACAGACTATCATTCCTGAGAAGAAGAAATCTCCTCCGTCGTCGCTGACGAA
TGGTAATGGGAAGAGCATCCGTCCACAATCATTTACACCAGGATTGAAAAGGTCAAAGTC
CTTAACGTCAGCGGATGCACTCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGC
CGGCGACCTTGGTACATTCCCGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGA
TCCGAATGCCGTGTGCGCCCGTACTCTGATGGATGCTGTGGGGCACCTGGTCTCGCGCGC
AGTGGAGTCGCCGCGGTACGCGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCG
CGAGCAGACGGAAACCTTCCTCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGA
TAGGGACAAGCTGTTGGGCGCGATGATCGGCGGTGGACGACCTCGGTTGATGGCGTTCCT
GTCGTTCTTGCTGGAGATGTACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGC
CAGCGCCCAGCCCGGGCACGTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCAT
CAGGCAGCCGGTGCCTTCTGCTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACAT
AGGCCGAGACTTGGAAACTCAGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCG
TGACGCTTTCCTCAATACTGCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTCAT
AGAGCTTCACGCATCTCGGTGGCAGCTACCAGGATGCGCAGTTCTTTATTACTATCCTTC
GTCCAAATAGCACGTTGTGCAAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACC
TAGAATCGGATGTTCGTTAATATCTCACATTATGGATATTATTGCAGGGCATATCATTTT
AAATCATCTTTGATGATTGGCCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGC
TGAGGGTTTTATCGTGAGTATCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGT
GGGATTTATAAATTCTTTATTATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGG
TTACGAGCATTTCTTAATCGAGTGTTCGCTCGTGTTTCTTAGTACTGTTGCGTTAGTTAA
TGTACAGGAGGTATGGAATTGTCCTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATT
AATGTGCCTTTAAAATAATTTAATGGATATATAACACTTTATCGTCACTTTCATGCAACA
AATAAATTTAATAAAAATATTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTA
ATTTAGCTTAAGGTGGATTCGAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTAC
ATTGTAGATTAATTTGTTTGGACAAATTGACAGTGTACACTACTGTACGATTCTCGCATA
GTACTTTGTGCATTGTATCCTTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAA
TAGCACTAAATATCTTGCTTGTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATT
AAGTTACAATGCACTTATTCCCAACATGATTTAGTACTTCATTGCACTCAGGTATTTAAT
TTAATTTATGTTTCAAAAATGTTTTAGGATTGGTATCAAAATTAAAAAAATAAACGTTTG
ACTGAATTGTTTGTGGAAGTGAAACTATCTCTGTTTTATGCTTGTGATATTATAAATTTA
AGGTTTCTGGTATATTTTCTGTCCTAACCAAAGACTGTAATGAATGGGATATTTCGTTTT
TATTTTTTATTAACAAAAAAGAAAACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGC
TCATTATCTGAGGTTGTGTACGAGTGAGCGAGGAGACGTTCATCAACTTAACCTTAGATT
GCTCTTATCAATATATAATTATCAAAGTAATTTAAATGAATAATATGGGAAATATATTAT
TTAAAAAGACCTTTGACTTTTCATAATAATGCATTCTTAGCGATTTAAGTTAAAAATACG
TTTGTAGAAAAAAGTTGAAATTAAAAAAATGGTGCTAACAAAAGAGATATTGGTGTATTG
TATCTTTATTCATTAATCTTATTACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTT
TTTGTATGAATAAAGCACTTAAAGG
(3565 bp) |
