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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24888_c0_seq17
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_heat_shock_factor-d_isoform_X3_[Bombyx_mori]
Ontology
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0009408 P response to heat
GO:0022008 P neurogenesis
GO:0031427 P response to methotrexate
GO:0042742 P defense response to bacterium
GO:0042802 F identical protein binding
GO:0043388 P positive regulation of DNA binding
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0050832 P defense response to fungus
Transcript
Level		FPKM:0.72 TPM:0.66
ORF Entry
Sequence
(Nucleotide)
CAGCTATGTAGTTACGTAAAAATTGCGTTAGTGTGCGTTGTAATTTTTTCGGAATATTTT
AGTTGTGTGTGTTTATAATTAAAATGGCGATCTGAGCAGTGTTTTGCCGAACTTGATAAT
TTTCTTAAAAAATACCGTGAGATAATTTGAAGACTTTACATTTTATGTGATTTCAGTAGA
ATTTATTTAAAAAATGCGTTCCGTTGTCGAAATTGGGGCAAGTGTCCCTGCGTTTCTTGG
GAAACTGTGGAAATTGGTTAATGATTCTGAAACAAATCAATTGATATCTTGGAGTCCGGG
TGGAAAGACGTTTGTCATAAAAAATCAGGCAGATTTTGCTAGAGAACTTTTACCACTGTA
CTACAAACATAACAATATGGCAAGTTTTATAAGACAACTTAACATGTATGGATTTCATAA
AATAACTTCTGTTGAAAATGGCGGCTTGAGATATGAAAAAGATGAAATAGAGTTTTCGCA
TCCCTGTTTTATGAAAGGACATGCATATTTGTTGGAACATATTAAAAGAAAAATTGCAAT
TCCAAAATCTGTTGTAACAAGCAATGAAAGTGGTGAAAAAATTTTGTTAAAGCCTGAGCT
TATGAATAAAGTTTTAGCTGATGTGAAACAAATGAAAGGAAAACAAGAAAGCCTCGATGC
CAAATTTAGTGCAATGAAACAAGAGAATGAAGCACTATGGAGAGAAGTCGCTATTTTGCG
GCAGAAGCATATCAAACAACAGCAAATAGTGAACAATCTCATTCAATTTTTGATGTCATT
GGTGCAACCAGCAAGACCCCCTAATACTAACGGCAATAATGTTGGAGTCAAGAGACCATA
TCAGTTGATGATAAATAATGCCGCTCATAATTCTGCCACTGAAAGCTCTTATCCAGGAAG
ATTAAAAAATATTAAGCTAGACAAGGATCCTTTATTGGAGGAGATCAGTGATGAAAATTT
GGAGGATGGACCTACAATACATGAATTGGCACATGATGACATACTGCAAAATGAATCCTC
CCAAGATGCCATTGACCCAACATTCTTTGTAGCTACAGATTTGAATAATATCACTGATAA
TCAAAATGTAGCAAACCCATTATCCAATATTCAATACCATGTCACCATGGAAGACGGTGA
TGATATTGAATCAGGAGGCAATAAAATCGCATATCCTGTCAAGAGTAATAGACTACGATT
CAATGAGGATTTGCCAGTAATTACTTCCCCATCTCCAACTCAGGGTAAACCTTCATCACC
TTTAAACCAGAGTCCAGCGATTAATAATGTATTTACGATTACACCAAGCACTTCAAAGAT
CAAACCTCGTATCAAGACTACTAGTTCCAATACTAGAAGCTTAATATCTCCCAGCAGTTT
CAACCCGTCTGCTGATTTTAAGCTTCCAGCTGAAATATTTGCAAGTGATGATTCTGTAAG
TGATGTGGGGATACTGACTGCTGAGGAAACAGGAATAGAAAATATACTTCAGGATGTTGA
TGAGGACCCAATGGTATCTTCAACTAAAGACAAAATGTTGGGTGGTATTAACATCAAAGT
AGAAAAAGTAAATGAAGGACTTAAACCTTCCAAAAAGTCTAAGAAGTCCAATAAAGACGA
CACACAGAACATTAACTTAGCGGCAATCAAGACTGAGCTTCAAGATGATTTTGATTGGAA
CAATATGACCCTTGCAACAGTGAACAATAATACGAACAACAAAATAAACAGATTCCAAAC
AAGGAATGACCTTGACGATCATTTAGACGCAATGCAATCGGACCTTGAATCGTTAAGAGA
ACTACTGCGAAGCGACAGTTATGCTTTGGATACTAATACTTTAATGGGGACGGCCGAACA
AAATGATGTACGAGATGAAATCAATAGGTTCCGTTTTCACCCTTTCGAGTTATTCGGATC
GGACGATCCATTTTACGGCTTATCGTACAACCCCGCCGACGAAAGGGCGAAAACATCAAA
CAATGTCGTTGAAGGGAATCAGCTTATCTCGTATACTGGAAATATTCCAGACTTTGAGGA
TATAAATATGCCAGATTTAGAGAGTGAAAACTCTCAGGAAGGTTGTTTATCACCTGAAGT
CAGCAGCTCGACGCTCAATACTCCTCAGGTACAGATCAGATCACCTTCCTTTAATGTCAA
ACCATGAAGCAAGGTTAACTGGAAACACCTCATGAGAAGCGGTCTTCAAAAAAGTGACAC
AATGTCAATTATGAACTAAAGTATAATAGTGATGAGTGTGTTGAAAATAACGGACTAATA
ACATGGGTATGTGGGAAAATGTTCAAGACTGTTCTCAATGTATTATGGGTATATCTTGTA
ATATTTTACCAATACAGCATCTTATATTATTATTGCTTAAACGGGAAATGTTTTAGCAGT
TTTATATTGTATTACATAGTTTGTTTTTCTGTTTGATAGAATTGCAATTTCTCTTTAATC
CGCTAATGAACTAGTATTGTAGTGTGTACGTACTGCGTAATAACGTGATAACTCTCAATA
AATTGCTGCTTTGGTGCCTTAAAATAAAGATTTTATAATATCAAACTTTATATGAGTAGT
CTGTAGAAATATATAAATTTGTCAAGTTTACAATATCCAGTAGCAATGTGTACATTTTGT
ATTATAATATGTAACTATGTAAAGCTTTTGTATTCATAGCGATTGACAAAACAGCAAAAC
TTCAGTGTGTAGATAAGGATTAACTTTAGTAGCAATATCACATAAACAAATTTGTACATA
TGTATCCATAGTGTAAATTAACTGCGAGGTAAGATTGCCTCGTATTTGAAAGTCGACAGC
TGCAAAGCTTCACAAAAAGAACTGATGATTGTTGTTCGATGTCTAAAGAATTATTTTTGT
TTGTTATACAATTGTGATTTATTTTAGTTTTTTTTTGCAGTATGACTGCCGCTTTGTTTA
AAAAAGTACCATTCGCATAAATATATTTATATACAAAATAATGTATTTAGTTAGCATACC
AGGGTTTGTATGTGCGATGATGGTAAATATTAATAAAAAACCCAAAATGTAATTTGGCAC
AGGAAAATATTTTTTTGTTGTTAAAATGAAACTTATTGTTATCAAATGTGTATTTATTAT
AAATACGTTTTAAACGTTCATAACCTGCACTGCCTATATGTTGTATGAAATCAGTAAAAG
TATTATGTGCATTTTTATTCACCCCATGCTCGTTAAGAGCTTCTCCTTTTTCAAAGGCAG
TAATAATAATTTATGTGGTGATTTTCATCCAAGCACATCATTGATCAATCTGGTCTCGAA
CCCAAAGTTAATTTTAATACATGTTTTTCAAGCTATTAAATATTTTTATATTAACATTGC
ATTATAACCTAAATAAATGTGCTATTCCAGATTTAGTCCATGAAAAATTTATTTCTATGC
AAATCTGTTATGTTAGACCCTGATTATCTACATTTGTTATTGTGATGATGATTACTATTT
TACAACTCGCGTATAAAAATTAAGACTAAAATAAAATTTGTCTATAGGAACAAAGTAAGA
TAACATAAGCTATCCTTAAGAAATATATCTTATATCATTATTGATAAGTTATTTTTAAAT
TGAATGTAAT
(3610 bp)

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