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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24887_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_remodeling_and_spacing_factor_1-like_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
Transcript
Level		FPKM:3.36 TPM:3.11
ORF Entry
Sequence
(Nucleotide)
AATTGCTCGTTAGTCATAAGTGAAATAATAATATATGGGTGTATAGAACACTATAATCAT
GTTGAGTGAAAAAGTGATTTGAGTTGGACGATGGCGTCTGACGGTGAAATTTTGTGTACG
AATGATCCTAATTTTGCTGTTATTTATTCGTTTTTGAAAGTATTCGGAAAGTTGTACGGC
TTAGTGGTGCCTAGTATAACTAAATTGCAGGATTACATCGAAGACACGCAGGAAGTCGCG
GAACCGTTGAAAGATCTACATTTGAGACTGCTACGTCGCGCTCAAAAATCTGTTTTGAGC
AGCAGATGGGAAAAGTGTCTGATAAAATTCTGTCACCAACAAAGACATCATCAAGAGGCG
TGGGAAATCGAAAGATTCACATACAAGAAAGCTAGCACACAAGTAAAACTAAAAGTATTA
AAGATATTACTAGAGTATCAATTCACATGTCACCTAAAATTCAAAACTGCAGTCAATGCA
ATATCCTGCAAGGAACTGCGCTTAGATCCAATAGGAAGAGACAAGAATGGCTGTGTGTAT
TGGTTGGAAGTTGACCATGAAGCAAACTTGTGTCTGTATAAAGAAGACCAGGATGAGGAG
ACATGGCAACTAGTGGCTAGGAACAGAGAAGAATTGGCCAATGTAATATCTAAATTAAAA
GGAGGGGAAGATGTGTGTCCTTTGAATATATTGAATACACAAGAAGATTCTAGTAGCACC
CCGGAAGCATCTCAACCTGAGAAAGAAAAGCCTGAATCCTATGAAGAAGAAAACGAGGAA
GAGTTTCTCAGTCCAGAATCTGAAACAGATGCAGAAACGGATGATAAAAATGATGAAGAA
GAAAATGATGAAAAATGTATAACAGAAGTAGAAAAAGATAAAACTGCAGAAGTAGAAAAA
GATAAAACTACAGAAGTAGAAAAAGATAAAGGTACAGAAGTAGAAAAAGATAAAAGTACA
GAGGTAGAACCTTCAAAGAGCAATGAAGAATTTAGTATTGTAACAGAAGAAAATGTTGAG
TCCACTAATGAAGAAGTTAACCAAGAACAGAAAGAAGAACCTACTCCCGAGGAACAATTT
CGAGAAGTAAATGAGGCTCATCCTCCAGAAGAATCCTCAAATTCAGAAGAGTTTCCAAAG
GAGACTGTAGATGATATTGTAGAAAAAGAACTTATAGAAAAATCTGAAAAAGAACAACAA
GAAGATGATAGAAACCTAGAAAATAAAGAAGAAGTTGGAGAGACCATTGAAGAACCAGTT
ATGGTAATTACTGGTGAAGGTAACGGAGCAGATTGTGAAGGTTTATGTGAAGAACTCAAG
TATTTTAGTGAAGAGGATTCGGATTATGATAAAATATATTCTGATATAGTTGACTGTATA
GACAGACATAGTGATTTTGATAGCTCATACTTTTATGGAGATGAAATAGTAGAAGAATTT
ATGTATTTTTATGGGGAAGGTTCAGGTTTCGATAATTGCACTGGTAACCCTGAGGTCGAA
CATACTAACAGTGCAGAAGACAACACCGACATTGACGAAGATGCAGAAGAATGTGTTAAC
GGTGAACATGAAGATAATTCTAGTGATACTAAAATAAGTAAAGATGTAAATTTAAAAAGT
TGTGTACCCTCATTGACTAACAGATCTCTGAAGAAACAATCTAATGATACCGCTGAAGTA
TTAAAATCTGACCCTAAGAAACATTGCATTAGAGATTTAGAAAAACCTGATATTTCTGAT
ACAGTACCTAATGAAAACAGCGCTAACACAAATATAAACGAAAATAATGATACTGAAATT
GTTACTAAAGACAGCATTAAGAAAGTGAAAGGTAGAAATAAGTTTAAAAAGAAAGCTGGG
CTTAGGAAATCAAGCATAAAAGAAAGTATAAGTTGTGTTCCTGAAACTGACAATGGACAT
GATGTTAAATCAATCATTGAAAAGAGGAAAAACAGTGTGTCATCAGAAGATCAAGAGGGC
AATACTGACAATGAACGGGACAAAAGTCCAGAAAAAGGGGAAAAAGCGGAAGACGATTTA
CCTACAAAAAAATTACGCTTAGAAATGACACCAGAAACTGATGGAAATATAACACATTCC
AAGGAAAACGAGTCGGATAGTATAAATAACAGTATAGAAAAAGACAGTATCAATTCTATA
AGCCAGCGGAAGAAGATAAAAGCTATAAAAGGGAAATTTAAAAGGAAAATAAAAATTAAA
AATAGCACTGTAAATAAATCTGAAGAGGATAGAAAGGTTAGTGATAAAAAGGGTAAATCA
TTAAAGAGATCAATCTTGGAAGCTACAATCAGTGATAAAGACAAAACAGAATCTCAGAGT
GACAGTGATGAAGACATACCAGTTGCTAGTGGTAAAAGATTGAAGACGAAACCAAAAAAA
CTTATCAAATCTACGAGAAAGAAAGTAGAAGCGAAACTGTTGGAAAAACATTCTAGTGAT
GAATCAGATGAAGAAACTCTATACAGCTTAGCTGGCAAGAAATCGCCTCGTAAAATTGTT
AAAAAGAAATTGAAAATTAAAGACAAACAGAAGGCCACCAAGTCCAAATCCCGTGGCGGT
TCTGATGACGATGACGTGACTCCAGTGAGACAGTCCAGGCGTATAGCTCAACAGAAGATC
AAAGAAGAGGCAGAGAGAAGGCACCAAGAGGAGGTGGCATTGCGAGAACTAAAATTAATA
CACAAGAAGAAGAAGGAAGATGAAGACGAAGAGGAGTGGGTGGCGAGTGACGTCAGCAGC
CCTCGCGTGAGACGCTGGTCGGGCTCCGCGTCCGACGAGCCCAGCCCCGACTCCGACTCC
GATGAACCACTCTTCGATCAGCCTCCAGAGGAACCTGACTTGAATTTCGACAAATCTGAC
CACGAGTTCTCACCTGAATCCGACTTGGAGAGCGGAGAGCCCGTCGAACCCACAAAAAGG
GCAAGGACGTTACAGGAAGGTCAAGACGAAGGGTTCTGCAAGCGGTGCGGCAGCGGGGAG
CAGCCCGAGTGGATCCTGCTGTGCGACCGCTGCGACGCCGGCTACCACGCCAGCTGCCTC
AAGCCCATGCTGTTCGTGGTGCCCGAGGGAGACTGGTTCTGTCCTCAGTGCAACCACGAA
AAACTAATAGAATCATTAGAACTGGAATTAGTGAAGTACGATGAACTGATGGTACTAGTC
GAAGAGGAAAGGGCCAGAAAGAAAGCGGAACTGAAAGAGAAAGCGGTAGCGGACGCTGAA
GCGGGAGCGGTCCGCGAGTCCGACAAGCGGCCGGACAAGCGGGACCAGGACTCGGAGTCG
GAGGAGAGCAGCAGCAGCTGGTCGTCGTCGTCGTCGGGCGCCGTGTACCGGCTGCGGGCG
CGCCGCCAGCTGCCCGTCAGCTACCGGAGCCAGGAGTACGACAGGCTCATCTCCACAGCC
ATTAAGGAGGAGTACGTGGAGCCGACCACGAGCGCCGGGAACCAGGGTCGGGGGAAGGAC
ATCTCCACCATCATCGAAGCTGCCGAGGAAGAGAAGCTGAAGGCAGAGCGCGAGGCCGTG
GAGCAGGGTAAACCTTTAGAATCGAAGAAGATGAAGAGGAAACAGCGCCGCAAGCCGAGG
AAGCTGAACTCGCTCGACGTGCCTTCAGAGGACGACGACGAAACCGACGAAGACTTCAAA
GATGTCGGCATGGAATCCTCGTCAGAAGAGATATCGTCGTCGGCCGAGAGGGAGTCGACC
GAATCTCGTTCGTCGGACTCACTGCCGATCAGAAGAACCGGTAGAACTGATAAGAAAGAA
CGTCCGAAACTGGTGGAGTCTTCTCCCGAAGTGAAGAAGAAGAAGAAGGGCGTGTTCACG
GACAGCTCCAGTGAGGCCGCCGAGCACAAGGAGTGGAAGGCTAAGAAAAAATCGAAAGAG
AAGCGTCGGGACCGCTCGAGGGGCGGCAAGAGTCGCG
(3937 bp)

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