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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24886_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		homeobox_protein_homothorax-like_[Bombyx_mori]
Ontology
GO:0000060 P obsolete protein import into nucleus, translocation
GO:0001654 P eye development
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007380 P specification of segmental identity, head
GO:0007383 P specification of segmental identity, antennal segment
GO:0007420 P brain development
GO:0007422 P peripheral nervous system development
GO:0007432 P salivary gland boundary specification
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007479 P leg disc proximal/distal pattern formation
GO:0007480 P imaginal disc-derived leg morphogenesis
GO:0007525 P somatic muscle development
GO:0008134 F transcription factor binding
GO:0009954 P proximal/distal pattern formation
GO:0010092 P specification of animal organ identity
GO:0034504 P protein localization to nucleus
GO:0035282 P segmentation
GO:0035326 F cis-regulatory region sequence-specific DNA binding
GO:0042659 P regulation of cell fate specification
GO:0045664 P regulation of neuron differentiation
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048735 P haltere morphogenesis
GO:0048749 P compound eye development
GO:0060323 P head morphogenesis
GO:0090098 P positive regulation of BMP signaling pathway
Transcript
Level		FPKM:6.95 TPM:6.43
ORF Entry
Sequence
(Nucleotide)
GACGGCGCCTCCACCCCCGACGTCAGACCTCCTTCGTCATCGCTGTCGTACGGCGGCGCG
GTGAACGATGACGTGCGCTCCCCAGGGTCGGGGGGCACGCCGGGACCACTCAGTCAGCCC
CCGCCGCAGACCCTCGACGCTACAGACCCAGATGCGATGGGCAAATGGTGTCCGTCGCGG
CGCGAGTGGTCCTCCCCACCCGACGTGGCGCGGCGGGTGTACTCCTCCGTGTTCTTGGGC
AGCCCCGGTGAGTACCCAGGTGACGCGAGTAACGCCAGCATCGGCTCCGGTGAGGGTACG
GGCGAGGAAGACGATGACACGAACGGTAAAAAGAACCAGAAGAAACGCGGAATCTTCCCG
AAGGTCGCCACAAATATCCTGAGAGCGTGGCTCTTCCAACATTTAACGCATCCGTACCCT
TCTGAAGACCAAAAGAAACAATTAGCACAGGACACAGGGTTAACAATACTACAAGTAAAT
AACTGGTTCATAAACGCGAGACGTAGGATAGTGCAACCAATGATCGACCAGTCAAATAGA
GCAGTGTTCCCGCACGCCGGCCCCAGCGGCGCGTACAGCCCCGAGGCGACCATGGGCTAC
ATGATGGACGGGCAGCAGATGATGCACAGGCCGCCCACAGACCCCGCCTTCCACCAGGGC
TACGCGCACTACCCGGCCGAGTATTACGGACACCACCTCTAATGCACCGAGCATCTTTGT
ACATATATGAATACAAGTCACACCCTCCGACTCCCGGTGGTGACGAGGGTCGTGAGCATC
CAGCACACGATACAGAGAGGCCGCGCGCGACACCAGCGCGACACCTGCGCGACACCGTCG
CAACACCGACGCGGCAACAACGCGACGGCGACACGCCACACTTACAGGAGAACTATGCTA
AAATATGTAAATAAATAAATAAATAAAGGATAACGTAAACGCGAAACATTTTGTAATATT
TGAAACAGTATACGATCTCCTAAATTAAGATAAAAGTCAACTGTAATATTAAAAATTAAC
GAGAGAAAAAAAAAAAAACATCTTTGTAAATGTAAACTTGAAGTGACATGGACGCTGATT
GGTGCGGCACACCTCGGGAGGTTTCACCATCGCGGGAACTGCGAGGAGTCGACGTCTGTA
ACAATAATGTGGTTTCATAGTTATCTTATAAATATTTATAGCTAAATGTGTATTGTTATT
ACGTAAATATAAATAAATAATTGATTAGTTGTAAGTTGTAATTATCACTTGAAGCAATCG
GATTAATGTCGGCGGGAAGGTGTACGACGCGTTTTCTGTTTTGTAAACAAATCGTGTAAC
TAATTATGATTTCTTTCGAAAACCATGTTCGTGACGAGCGGCGAGACGTGCCCATCAAGG
CGGCTAAGTTTGCAGGTCAATCGATCGTCAGTCCCGACTGACGACTTCGTTCCGTTTTGA
TGAGCACGTCTCGTCGTATAGTATAAACGTTCATGTCTCCAGAGTGTTGCATCTTTATCT
AATCATTTATTAATAAATTGTCAAGCTCAAATCGTACTTCTAGAGGAATGTCAATTTATT
ATCCACATTTCTTATGACACAGTTTTTATTAGTTTCCCACACATAAAATACATATCTTTG
AATTTTATATATTTATTGTATATGTAAAAAAATAATATTATATGTGGAAAATACCATTGA
TTTTTCACGTTTTGCCTTTATGTACTATACTATAGCACAATTGTAACCAATGTATACGAA
CACAAAATGTATTTTACAATGTTATTGAAAGATTTTTAGGTATATTTTTCGTCTTAAAGA
TTATACCGTTGTAACAGCCTTCTGTGTTACCAAAAGATTAAGAAAGTACAGATTAAAAAT
ATCGTATATCAAAACTCTTATGATCGAGTATGCCTCTGTGCCGTGTCTGTGTCAGTTCGT
AAGTCTGGAGCAATTCTAAAATAAGTATTATGTAACAGTGAAACATGATGGAAAAAAAAA
AACAATATTTTTAGTCTGGATTTTTTAACAAATCGTGTGGTAGGTCACGACTGACAATTT
TAGCAGTTTCGTTCTAGATTTTTCCAGTTCCGTGGTAAATATTTTTACTTAGAAAAATCT
AAAAGTCGTCAACATATCTGTATGTTGCTATCTACGTTAAATGTTATTTCTTTAAGTCAT
TAAAATATGGAAACTGGCGAGTATTAATACTTTAAATTACCACGGAACAGTCATCATGTG
AATGTCGATCAACTGATAGAGCCTGTGAAATTTAATAACATACGAATTCCCTATTTTTTC
CCCATAAAGTAAGCAAAGGAAAGCTTTTGTACAATTTGTGAACGGATCGATATTCCCATT
ATGAGCTTTTGGTAATAAATTTTATAAATAAATTAAAAGTAATGCACCGCATTACTGCCT
TATGCTATGTATACGAGGAGGAAAGCTATTAAAATATGAGAATTGACCGCGGCTAACGAC
AAAAAGCGGTTTTTATAGGCAAATAAAATAATCCAAACAAGCTTTATTATATGGTAGGGT
AAAATGAAACGAAATATCTTGTGTTGATTCATGATTATCGTGACACACTTGTTTCCTAAT
AGATAGGTATCTTGCTGTTAACGAAAAATTGACTTTGAAGCCTCCAAATTATTTTGAAAC
GAACCATAAAAATAAGATAGATACAAAAATATTATAAACAAATAAAATTCGATCGTTTCG
CTATTTTTAATAAAAATGTTTAATGAGTTAATTAGATTTTATACCGATAATAATATGACT
ATCTCGTGTGCTTTTATTTCAATTGCTTGTCCGTTGATTGGTAAGGCGTATTGTGTGCCT
GTGTGGGCGGGTGCCTGAGGTGGGCCTATTTCTGCCACGAAGCAGTCATATGTTCAGGTT
TTAATGCCCGAATTATTCGTTGTATACAATTACTCGACCCTGTCGTAAGGCGGCTGAAGG
TTGTAGGGTCTACAGGCTACTATGACCTATGAATGCTTGCTCGTCTACCTACAATCAGCA
CAAACACAAGAGTGTGCTAAAAAATTTGAAAGTTCAGAGCCTACCATTAAACATTTTTTT
TTCTAAAGCCTTTATAAATAACTCGTATTTACTTTTAAATAAACACATAGTAGATTATTT
AATTTTCCCCCTTTTAAAATTTTTAAATTTTTTGAGATCTTTAGTAAACTATCTATTTAG
AAACATTTGTGTCACAATTAAAAACTACTGGTACGTGCATACATCATTTTGATTCCTTTG
TACTTTGTAAATACATCGTGTCATTGGCCCTTGAGTTTGACGTTTGACATTAATAATCTT
TGACACCTCATCATATCTTCTGTTGTCTAGTCTAGCTAAATTCGTCGTCTTTGCGACGAC
TACATTTTACCGTCGTATATTGCACACGCACACTAAAGTTTTATATCTAAAGGTTTCCTC
TACAATTCTACGTTCAGGGGCCAAAAAAACAATTCCATCATTATTTTTTTTTATAATCAC
TCTATTTTCGATTTAATCTCAGTATTAACATACATTTTTCTTTCGCAACACCAGATTTTG
TTGTAACTTCACTATTAGAACGTGTTATCGGGCGCCATCTTGAATGCGCGACTGTCGAAT
ACGTCAATTTGACAGATGACGTTTTATTAAACTGTCATCGAACATTAGAACTGACAGACG
TGTGTTGAACATAGCGCTAGAACGCGTTATTATTATTGTTAACTGTAATTGCGTGTAATA
TATTTTTTATTAAGAGGAAAATCTTAAATAGTAGTTATTAAGTATTAATCGATTAGTTGA
AGGAAATGTTTTTTATTTCGATTTTTCTCTTCATTATATATTATGTATGTACATTATAAT
TTTGAGTCAAGTTATTGTAAATATAGTTACTAAATTGTAAACATCTTGGGTCGGTCAGCG
TTCAAACGTCTTAATTATATTTGTATTGCTTTCCAATACATACGTACAGAATGAGTGGAC
CGTTTTATGCAAGATCGCGCGCTGACGTGACGGACGGAAAAACTGACGAAAATGTGTCGG
CATTATGAATGCTACGAATTGTGTAG
(4046 bp)

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