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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24867_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:3.61 TPM:3.34
ORF Entry
Sequence
(Nucleotide)
TGCGCTTTTGATGGTCTACGCGACATAACATAAAATCATTTTGTGGAAAATTTGAAGTTT
GTTGTTATTTGTGACAACTTATAATTCATAATTGTTTATGAAAGCTTCGTGATAATTACC
TTTCCAGGCGTAAGGCTGGATTTTTCAGGTGTGGTTTGCCTGAATGCAATCGGACTCTAT
AGTTCGAGCGGTGTACGGTAGCCATCTTGGAATCGAACAAAGCTTCAGATGTGTAGTTTG
TCTGTTTATCAATAATTTTTGTGCATTTTATTGTAAATAGTTTGTATGTTTAGGATATGT
ACGGAACGTTCGTCCATATGTGTAAATAGCTATGGCTGCGACAAGGAAATTACAAGGCGA
AATAGAACGTTGTTTAAAAAAAGTAACAGAAGGAGTTGAAACTTTTGAGGACATCTGGCA
GAAAGTTCACAATGCGACGAACAGTAATCAAAAGGAAAAATACGAGGCGGACCTTAAGAA
GGAGATCAAGAAACTGCAGAGGCTACGCGATCAGATCAAGTCGTGGATTGCCTCTGGGGA
GATTAAAGATAAGAGTACACTATTAGAATTTAGGAAACTTATTGAAACACAAATGGAGAG
GTTTAAAGTTGTGGAAAGGGAAACGAAAACGAAGGCATACTCAAAAGAAGGGCTTGGGGC
GGCACAGAAACTCGATCCTGCTCAGAAGGAAAGAGAAGAAATGTCATCATGGCTCATCTC
GTCCATAGACGCTCTAAATTTACAGGTTGATCAATTTGAGTCTGAAGTAGAATCACTATT
AGTGGGTAAGAAGAAAAGACTAGACAAAGAGAAACAGGACAGAATGGAGGAGCTCAAACT
GAAACTGGAAAAACACAGGTTTCACATAAAAAAACTTGAAACGCTACTAAGGATGCTTGA
TAACATGTCTGTTGAAGTTGAACAGATAAAAGGTATAAAGGAAGACGTGGAATATTACAT
AGACTCATCTCTAGAGCCGGGGTTCGAGGAGAACGACTACATATACGACGATATCCAAGG
GCTGGACGAGATCGAGCTCAGCGGTGTAGGACCGTCCACCGATTCCAACAACAGCAATGG
CTCCGCTGAAACTCCCAACAGTATACTCTCTGGCACAAGTCCTGTAAGAACACCGACGTC
AGAAAACCACAATCATTCGACAGATTCAATAGACATAGAAAAGAAAAAGAAAGAAGAGAT
TATACCTAAACCGGTAAAACCACTGCCGCTCCGTGCGGTGAACGCCAGCGTGGTCGGTAA
TAGCACGTGTAACGTTAGTTCCTTGCTCAATAACTCCGCAGCCGCAAGCAATAGTACGGG
CGTGTCTGGCGCGTCCACGCCGAGCAAGCCCGCACCCAGTCCACCGCCGCGACCCGCTAA
CAGCACAGAAGTAGTCGAGAATGGTCCAGTATCAATCACAGCAGCGGTCAACACGACGAC
GACGCATCTACCGCCTCCCCCCACGCAGCAACCGCCCCCAACGTCGCGGAGTACATCGTC
GAGTGGCGGCGCCAGCGCGAGCGTGACGACGTCCCCCCTCACCGTCAATGGCCCCCCTCC
CTCCGCGCACCACACGCCGCACCACGCGCTCAACAATGGACGAGTGAGCGAGACGTCGAG
CATGTCGGCGGTGAGCGCGTCGAGTGCCACGAGCGCGAGCAGTGCGGCGCACAACACCGC
CTCGCTCAAGAGCATGGCGCAGGAGGCCGTGCACCGCGCCGGTCTGGACCTGCACCACCA
GAATACGAGACGGAGTACGGCGATAGCGCAAGCGCACATTCCGCCACTATTAGGAGTCGC
GCCCTTAGGACCGCAGCCACTTGACTCGGGCCATCAAGTACAGTTCCAGATGATGGAGTC
AGCGTTCTATCACATGCCCCACCCTTCAGACTCGGAACGTACAAGGGTCTACTTGCCTAG
GAACATTTGTCGGACTCCTGAATATTACAATCAGGTGTTATTACCCCATTCGGACACGGT
AGAGTTCTTCCAGCGGTTGTCGACGGAGACGTTGTTCTTCGTGTTCTACTACATGGAGGG
AACGAAAGCGCAGTACCTCGCAGCGAAAGCGCTCAAAAAACAAAGCTGGCGCTTCCATAC
TAAATACATGATGTGGTTCCAGAGGCACGAGGAACCAAAAGTCATCAACGAGGAATATGA
ACAGGGCACATACATCTATTTCGACTACGAGAAGTGGGGCCAGCGCAAAAAGGAGGGCTT
CACATTCGAGTACAAGTACTTAGAGGACCGAGACTTGAATTGAACCTGCGTCACCGAACC
GCCGTCCGCACTCGCGTCAACTACACACCACCTGCGCGCAGACCACTCGATAACTATACA
CGACATTCCTATATTTAGGAAATTTTTAGTTGTAATTACCAAAAAAAACTTATGATAAAA
CAACTCGCACCGTTTTTTCTGTATGTGCATACGGGAAGCCAGCCGTGTCATTCGAAATTG
AGCACGCACCGGAATGCTCACAGGTTGGAACTCGTGTGTACGTGACGTGTTCACGAGCGC
TCACGTTTGTCAGGCCGCGGCTCCGCCGTTTGCCAACGTAAGCTAATAATAAAAAAACAT
GTACCTGAAATAAATTTCATGGACTGGTATTTATATAGAGACAATGTTATGACGATGGTT
TTACGGGAAAGATGTTTTAATGGACGTCGCATCGAGACGATGGAAACGGATCGCGATGTC
AACGCGAAGAAACGTGAAGTTACTACTACATTATGATCCACGATAATAGCGTCGACCGGG
ACTAGTGATGCTATCGATAGTTTTATATCGATGTAATACTTTAACGGCTCGATTCTATTA
TCGATTTAAATGTTCGGACACGAGATTTTTTTTGTTAATCATGAAGAAATCTTTTGTATA
AATAGCTTTCTGGCAGTCAGTGATGTAGTGTTGTTTTTTTTTTTTTTGTAATAATTGAAC
AAAAAAGCGAAAGATATCATGTGATGCAGTATATTTAGTCAGCCGTGCGCGGTCGTTAAG
AACTAATGTGATATTGTTATAAGCTCGGAACATTCTTGGACTACTGTTAGATAAATTGTG
AATGTGTGAAAGGCGTTGCGTGCGTAGCTATAAGAGGTTCGATGTTGACAATTTAATAGT
TTAGAATTTTCTAATTGCCTAGTCTGAATTCCGATATACGAACTTAACCGATAGTTTCTT
TCGAATCAATTTGTAGAATTGTACAGTTTGCGAAAGCGTTGATGAATATAATAGACTTTT
TTCCTAATATACAATGAGGTCTTTGAGTGACAAACACCCTCGCACTGTCTGTCACTCAAA
CAACTATAAATAATCGATAATCGCGGATGATTAACGAATATCGATTTCTCACATACACTA
TCGATACTTAAGTTGTTGACACGATGTTTTCATTAGTTTTATAATACAAATTAATAATTG
AACACAACCACCACAATACTATAGATCTGTATTTTTAGTATTCCATGTGTGATCTCGTGT
TTAGTGAATTACACGCTCCGAGTTTGTTCCGAGACGTTTTTATAACTTCTGCTTTAGACG
TTAAATTTTGGTTTTAAGCGCTGCGACGTGTGCTTCACTTAGACTTGTTACGAATCTAAA
ATTTCATAATGAATGATAAAGCATAATCTGTAATTGTGTTTGTCTACGTGCGATTAGGTA
ATCCAATATATATATATAAATATAGGCGATTTTTATATTCGAAAAAACGGCAGACAAATG
TTTTGTAAATATTGGAAAATTTCAAAATTAGGCGCGTTTTATACCAGATGAGTTTCTCGA
ATACAAGATGAGATTAAGTTATGATCGGTGGCGGGGCGTTTTGTGATCCGCCGTGGAGAG
GTTTCCACCACTCTGCCAATTTCTGCTACAAAGCCGGGACAATGTAATTCAATGTAATTG
AAGACTTTTCCTCATGCCTCACAGTGCAGGCTTTCATGTTATGATGTCTGCGTGTTCTGG
ATACCATTCTAATACCAGGCTGGTCGTGAACATGTTTACTACGATAAAACAAGGTCGAAC
TTTGACATATGTATAGCTTCTGACTCGTCATAGACAAGGAGTTTTACTACACTCTTTTCA
AACGACATCTTAATGTTTGTTTACACTTATCAAAATATTATCGAGTGCTATTCTCGGTTG
TATTAAAAAAACTGTACTTGTGTAATCAGCCCTTGTTTTAGATTTTGTTAACTGTTATTG
ATTTCTGATAGAAAACTGATTTGATAATTAAATTCTTTGTGATGCACACGTTATGTCTCT
GTATAGTTTATAAAGTGTTAAGTAAAAACAGTGTGATCCTGTTTGCTGCGGATGTGTGTA
CGCTTTTCCATCTCGAATGCTCGATAACAAGGTGTTATAAATAATAGTATTATAATTGTA
ATAGTGTAATCGCAAAGTACATCGTCAATGATTTGTTTTATTTATTGTATGAAAATAACA
TCGAAAAATACGATACGTACGTTTTAATTAGTTAAGGATCGATATAATCAGCTCAAATGT
TCTATGTACAATTGTATAATTTAAAGAAGTTAAAAAAAATAATGAAAAAAAACTAATTTA
TTGTAAACATAATGGTTGAACATACTAATGATTACTTTGTATGATGTTGTAATATGTGAT
ATTGCTAGTTATGTTCTAGATGTAAAAGCGTATGACGTTAGCGTTAGCAAAGACCTCCAC
AGTGCATACTGCCAGATTAGAAGCGTTCGTCGTAAAATGATCGATGTCAACACCGAAACA
TCGTTTCCATACAGTGAAACCATAGTATAATGTTTGCATTTTCAAAAAAAAAAAAAAATG
TGTGCCCTTCGCTTTGCTTGGCGGTCTCGTTTGAAACCACGTCAAGTTTGACGCAATACT
TTTTGGCCGAAACGAATGTGGTATTTATAATTGAAAGCCAAAAAATGTCGTATCAAATGT
TCGAATTTGACTTGTACTGTCTGTGAAGTGGTGAAGCAAGCGCCGGGCACAGATCGTTGT
TGAAAGCGTCCTTGTATATGAGTAGAGACGTGCAGCTAAGTGTTTGTGCGGAGACGCGTG
TGTACATAGGGATGTAGGACGTCGCGGGACACTAGTTGAGCGGTTACAGTGCGCGATCTC
GTTTATTCCGTGCGTGATGTTGATAGTTTTCACTTTTGTAAAAAGTCTATCGTGAGAGCA
GATGAAATGTGGTAAATAATAATTTAAAGAATATCTGTACAGTTCTATTTGTATAGAAAT
AATAAATAACGA
(5232 bp)

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