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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24867_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:0.64 TPM:0.59
ORF Entry
Sequence
(Nucleotide)
TGCGCTTTTGATGGTCTACGCGACATAACATAAAATCATTTTGTGGAAAATTTGAAGTTT
GTTGTTATTTGTGACAACTTATAATTCATAATTGTTTATGAAAGCTTCGTGATAATTACC
TTTCCAGGCGTAAGGCTGGATTTTTCAGGTGTGGTTTGCCTGAATGCAATCGGACTCTAT
AGTTCGAGCGGTGTACGGTAGCCATCTTGGAATCGAACAAAGCTTCAGATGTGTAGTTTG
TCTGTTTATCAATAATTTTTGTGCATTTTATTGTAAATAGTTTGTATGTTTAGGATATGT
ACGGAACGTTCGTCCATATGTGTAAATAGCTATGGCTGCGACAAGGAAATTACAAGGCGA
AATAGAACGTTGTTTAAAAAAAGTAACAGAAGGAGTTGAAACTTTTGAGGACATCTGGCA
GAAAGTTCACAATGCGACGAACAGTAATCAAAAGGAAAAATACGAGGCGGACCTTAAGAA
GGAGATCAAGAAACTGCAGAGGCTACGCGATCAGATCAAGTCGTGGATTGCCTCTGGGGA
GATTAAAGATAAGAGTACACTATTAGAATTTAGGAAACTTATTGAAACACAAATGGAGAG
GTTTAAAGTTGTGGAAAGGGAAACGAAAACGAAGGCATACTCAAAAGAAGGGCTTGGGGC
GGCACAGAAACTCGATCCTGCTCAGAAGGAAAGAGAAGAAATGTCATCATGGCTCATCTC
GTCCATAGACGCTCTAAATTTACAGGTTGATCAATTTGAGTCTGAAGTAGAATCACTATT
AGTGGGTAAGAAGAAAAGACTAGACAAAGAGAAACAGGACAGAATGGAGGAGCTCAAACT
GAAACTGGAAAAACACAGGTTTCACATAAAAAAACTTGAAACGCTACTAAGGATGCTTGA
TAACATGTCTGTTGAAGTTGAACAGACGAATTTCAGTTACCCTCGTCCAGCAAGTGATGA
AAGCTTAGAGACTCGCGGCAACCTTAGAAAATACTATGTAAAATTGCAGATAAAAGGTAT
AAAGGAAGACGTGGAATATTACATAGACTCATCTCTAGAGCCGGGGTTCGAGGAGAACGA
CTACATATACGACGATATCCAAGGGCTGGACGAGATCGAGCTCAGCGGTGTAGGACCGTC
CACCGATTCCAACAACAGCAATGGCTCCGCTGAAACTCCCAACAGTATACTCTCTGGCAC
AAGTCCTGTAAGAACACCGACGTCAGAAAACCACAATCATTCGACAGATTCAATAGACAT
AGAAAAGAAAAAGAAAGAAGAGATTATACCTAAACCGGTAAAACCACTGCCGCTCCGTGC
GGTGAACGCCAGCGTGGTCGGTAATAGCACGTGTAACGTTAGTTCCTTGCTCAATAACTC
CGCAGCCGCAAGCAATAGTACGGGCGTGTCTGGCGCGTCCACGCCGAGCAAGCCCGCACC
CAGTCCACCGCCGCGACCCGCTAACAGCACAGAAGTAGTCGAGAATGGTCCAGTATCAAT
CACAGCAGCGGTCAACACGACGACGACGCATCTACCGCCTCCCCCCACGCAGCAACCGCC
CCCAACGTCGCGGAGTACATCGTCGAGTGGCGGCGCCAGCGCGAGCGTGACGACGTCCCC
CCTCACCGTCAATGGCCCCCCTCCCTCCGCGCACCACACGCCGCACCACGCGCTCAACAA
TGGACGAGTGAGCGAGACGTCGAGCATGTCGGCGGTGAGCGCGTCGAGTGCCACGAGCGC
GAGCAGTGCGGCGCACAACACCGCCTCGCTCAAGAGCATGGCGCAGGAGGCCGTGCACCG
CGCCGGTCTGGACCTGCACCACCAGAATACGAGACGGAGTACGGCGATAGCGCAAGCGCA
CATTCCGCCACTATTAGGAGTCGCGCCCTTAGGACCGCAGCCACTTGACTCGGGCCATCA
AGTACAGTTCCAGATGATGGAGTCAGCGTTCTATCACATGCCCCACCCTTCAGACTCGGA
ACGTACAAGGGTCTACTTGCCTAGGAACATTTGTCGGACTCCTGAATATTACAATCAGGT
GTTATTACCCCATTCGGACACGGTAGAGTTCTTCCAGCGGTTGTCGACGGAGACGTTGTT
CTTCGTGTTCTACTACATGGAGGGAACGAAAGCGCAGTACCTCGCAGCGAAAGCGCTCAA
AAAACAAAGCTGGCGCTTCCATACTAAATACATGATGTGGTTCCAGAGGCACGAGGAACC
AAAAGTCATCAACGAGGAATATGAACAGGGCACATACATCTATTTCGACTACGAGAAGTG
GGGCCAGCGCAAAAAGGAGGGCTTCACATTCGAGTACAAGTACTTAGAGGACCGAGACTT
GAATTGAACCTGCGTCACCGAACCGCCGTCCGCACTCGCGTCAACTACACACCACCTGCG
CGCAGACCACTCGATAACTATACACGACATTCCTATATTTAGGAAATTTTTAGTTGTAAT
TACCAAAAAAAACTTATGATAAAACAACTCGCACCGTTTTTTCTGTATGTGCATACGGGA
AGCCAGCCGTGTCATTCGAAATTGAGCACGCACCGGAATGCTCACAGGTTGGAACTCGTG
TGTACGTGACGTGTTCACGAGCGCTCACGTTTGTCAGGCCGCGGCTCCGCCGTTTGCCAA
CGTAAGCTAATAATAAAAAAACATGTACCTGAAATAAATTTCATGGACTGGTATTTATAT
AGAGACAATGTTATGACGATGGTTTTACGGGAAAGATGTTTTAATGGACGTCGCATCGAG
ACGATGGAAACGGATCGCGATGTCAACGCGAAGAAACGTGAAGTTACTACTACATTATGA
TCCACGATAATAGCGTCGACCGGGACTAGTGATGCTATCGATAGTTTTATATCGATGTAA
TACTTTAACGGCTCGATTCTATTATCGATTTAAATGTTCGGACACGAGATTTTTTTTGTT
AATCATGAAGAAATCTTTTGTATAAATAGCTTTCTGGCAGTCAGTGATGTAGTGTTGTTT
TTTTTTTTTTTGTAATAATTGAACAAAAAAGCGAAAGATATCATGTGATGCAGTATATTT
AGTCAGCCGTGCGCGGTCGTTAAGAACTAATGTGATATTGTTATAAGCTCGGAACATTCT
TGGACTACTGTTAGATAAATTGTGAATGTGTGAAAGGCGTTGCGTGCGTAGCTATAAGAG
GTTCGATGTTGACAATTTAATAGTTTAGAATTTTCTAATTGCCTAGTCTGAATTCCGATA
TACGAACTTAACCGATAGTTTCTTTCGAATCAATTTGTAGAATTGTACAGTTTGCGAAAG
CGTTGATGAATATAATAGACTTTTTTCCTAATATACAATGAGGTCTTTGAGTGACAAACA
CCCTCGCACTGTCTGTCACTCAAACAACTATAAATAATCGATAATCGCGGATGATTAACG
AATATCGATTTCTCACATACACTATCGATACTTAAGTTGTTGACACGATGTTTTCATTAG
TTTTATAATACAAATTAATAATTGAACACAACCACCACAATACTATAGATCTGTATTTTT
AGTATTCCATGTGTGATCTCGTGTTTAGTGAATTACACGCTCCGAGTTTGTTCCGAGACG
TTTTTATAACTTCTGCTTTAGACGTTAAATTTTGGTTTTAAGCGCTGCGACGTGTGCTTC
ACTTAGACTTGTTACGAATCTAAAATTTCATAATGAATGATAAAGCATAATCTGTAATTG
TGTTTGTCTACGTGCGATTAGGTAATCCAATATATATATATAAATATAGGCGATTTTTAT
ATTCGAAAAAACGGCAGACAAATGTTTTGTAAATATTGGAAAATTTCAAAATTAGGCGCG
TTTTATACCAGATGAGTTTCTCGAATACAAGATGAGATTAAGTTATGATCGGTGGCGGGG
CGTTTTGTGATCCGCCGTGGAGAGGTTTCCACCACTCTGCCAATTTCTGCTACAAAGCCG
GGACAATGTAATTCAATGTAATTGAAGACTTTTCCTCATGCCTCACAGTGCAGGCTTTCA
TGTTATGATGTCTGCGTGTTCTGGATACCATTCTAATACCAGGCTGGTCGTGAACATGTT
TACTACGATAAAACAAGGTCGAACTTTGACATATGTATAGCTTCTGACTCGTCATAGACA
AGGAGTTTTACTACACTCTTTTCAAACGACATCTTAATGTTTGTTTACACTTATCAAAAT
ATTATCGAGTGCTATTCTCGGTTGTATTAAAAAAACTGTACTTGTGTAATCAGCCCTTGT
TTTAGATTTTGTTAACTGTTATTGATTTCTGATAGAAAACTGATTTGATAATTAAATTCT
TTGTGATGCACACGTTATGTCTCTGTATAGTTTATAAAGTGTTAAGTAAAAACAGTGTGA
TCCTGTTTGCTGCGGATGTGTGTACGCTTTTCCATCTCGAATGCTCGATAACAAGGTGTT
ATAAATAATAGTATTATAATTGTAATAGTGTAATCGCAAAGTACATCGTCAATGATTTGT
TTTATTTATTGTATGAAAATAACATCGAAAAATACGATACGTACGTTTTAATTAGTTAAG
GATCGATATAATCAGCTCAAATGTTCTATGTACAATTGTATAATTTAAAGAAGTTAAAAA
AAATAATGAAAAAAAACTAATTTATTGTAAACATAATGGTTGAACATACTAATGATTACT
TTGTATGATGTTGTAATATGTGATATTGCTAGTTATGTTCTAGATGTAAAAGCGTATGAC
GTTAGCGTTAGCAAAGACCTCCACAGTGCATACTGCCAGATTAGAAGCGTTCGTCGTAAA
ATGATCGATGTCAACACCGAAACATCGTTTCCATACAGTGAAACCATAGTATAATGTTTG
CATTTTCAAAAAAAAAAAAAAATGTGTGCCCTTCGCTTTGCTTGGCGGTCTCGTTTGAAA
CCACGTCAAGTTTGACGCAATACTTTTTGGCCGAAACGAATGTGGTATTTATAATTGAAA
GCCAAAAAATGTCGTATCAAATGTTCGAATTTGACTTGTACTGTCTGTGAAGTGGTGAAG
CAAGCGCCGGGCACAGATCGTTGTTGAAAGCGTCCTTGTATATGAGTAGAGACGTGCAGC
TAAGTGTTTGTGCGGAGACGCGTGTGTACATAGGGATGTAGGACGTCGCGGGACACTAGT
TGAGCGGTTACAGTGCGCGATCTCGTTTATTCCGTGCGTGATGTTGATAGTTTTCACTTT
TGTAAAAAGTCTATCGTGAGAGCAGATGAAATGTGGTAAATAATAATTTAAAGAATATCT
GTACAGTTCTATTTGTATAGAAATAATAAATAACGA
(5316 bp)

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