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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24796_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_protein_ref(2)P_isoform_X3_[Bombyx_mori]
Ontology
GO:0000407 C phagophore assembly site
GO:0000932 C P-body
GO:0001934 P positive regulation of protein phosphorylation
GO:0002376 P immune system process
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0016234 C inclusion body
GO:0016235 C aggresome
GO:0016236 P macroautophagy
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019901 F protein kinase binding
GO:0030154 P cell differentiation
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0042169 F SH2 domain binding
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043122 P regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043130 F ubiquitin binding
GO:0044130 P obsolete negative regulation of growth of symbiont in host
GO:0044753 C amphisome
GO:0044754 C autolysosome
GO:0046872 F metal ion binding
GO:0051291 P protein heterooligomerization
GO:0061635 P regulation of protein complex stability
GO:0070062 C extracellular exosome
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0097225 C sperm midpiece
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:36.57 TPM:33.86
ORF Entry
Sequence
(Nucleotide)
GTTTTTCTGTATCGTTCTCTAACATTCGAAAATACGTGAATCATAATTCTTAGTGCTTGC
ATAAAAGTATATAAAAAGTAATTCAAAGCCTCACTAACCATTTATTAGTGGTAACACCTG
TATTAATACGTGTTATTTGTGTCATTTTACGGCCAGTGCATTTATATAAATCGAAAATGG
AGGACCAAGTTCCATTTAAAGTTTATGCATTTTTTGAGGAGAATGCTCAGCCAGAAGTAA
GGAGATTTGGTGTTGAGAAAACTGTTGTGAGCAGTTTTCATTATTTGAATGCGAAACTGC
AAGAAGTCTACCCAAAGCTGCGGAACAAGATTTATAAAGTATCATGGAAAGATGAGGAAG
GTGATGACATTATAATTTCATCAGATGATGAAATGATGACTGCACTAGTGTCTTTGGAGA
GTGGGCTGATTAAGCTCAACGTTCACTGCAAGAATCCAGATATTAGAGATGATGACTGTG
AAATAGAAATAACTGCGACTACAATGTTCCCAGAAAACACGGATGGTAACACGGCAGTTC
ATAGCGGAGTCGTTTGCAATGTATGCAACTCTCCAGTTGTGGGTTTCCGTTACAAGTGCG
CAATTTGTCATGACTACGACTTGTGCTCCAAATGCGAGGCCGCCGGGAATCACAATGAAC
ACTGCATGGTCCGTCTCCCCACACCGGACATGTCGCGCACCTTGATCAAGGCGGCAATTA
AGAGATCCCGTCATATTTTCAAATCGGTTGCTACCCACGTCGATCAATGCCCTTACAAGA
AGAATAGACGTGAACGTAGTGGGGATACAAAACGCCGTGAAGAAACTAATGGGGTTAAAG
CAGACAGGGCAGAGCGTGAACACCAGCGTCGCTCTCGGCCGAGCTGGCTGGACACCTTCA
CCACATACATGAACGAGTTTACCAACCTCGTTGGAGATATTGGTCTCGATATGGATATTT
CCACCGAGCACCCTCCTCCGAAGACGCCCAAGCCAAGCTCCGAGTACCAAAGTACTTCTC
AAGAAGATCCTCATCCTCAAAATGCTGATCAAGTTTCCGAGACACCAAAGGCTTCTGAGG
CAGCCTCACTGAACCGAAATCCTTCCCAGCAGATCCCTCAGTCCCAGAATGCCTCACAGA
AATGCCCTCCAAACACAACTGCCACTGCTCCGCTATTCGATAATGGGGGAGCTTCAGGAC
CCAAAATTCAATTTGATGTTAATCAAGACCCTGATCCTAAAGTGCTGGATGATCTGCAAA
AGGTACTTAACATAATACGCACTAAGTATATCGAGCCCCACAACAATGCCAAGTTACAAA
ACCCGTCTACCTCTGCTAATGATCAGCCTCAAGCATCAGGCGAGGATTCCGACAAGCCCG
CTACTAGCCAAGCTCAGGGAGGAGAGGGAGACGCTAATATGGCGATCGATGTGGATAAAA
CTGATGCGAAATCTGTAAACTCGGACAGTTCTGATTCTTCTGGGCAAGACAAAGAAGTTT
CCTCCGACAAGGTTGACGATTGGACTATGGTGAACAAAGATTTGATGGATTCGAGTGCTA
ACGAGCACATCATGGATGTACCAGTGGCTCCGATTGGATTTAATCTGCCCAAAGAGTTCC
AGCAGCGGGTCACTATTGGACAACTTCTGTACCCGCAACTTAATACCGCTACAGCTGTGT
TGAAACCTAAAGAAGTGGAGCGTCCCAAGGAGTTCCAACCGGTCGCTGCCCAGAGACAAG
ACAACCAGCAGTCGACTCAGAAGCCAGCAACTGCTCCCCCAAATCCAGCAACTGCTCCTC
CAAAGCCGGCGGCACCTCAACCCACACCGATGCAGCAACAAGTGACTCCGCCACGATTCC
ACCACGCTAAGCCACATATCGATGAGGCACTGCGTCAAATGCTGGCGATGGGCTTCACTA
ACGAGGGCGGCTGGCTGGTCGAGCTCCTGGAGAAGAAGGACGGCAACATCGCTGCTGTAC
TCGACTTACTCACTCCGGTTAATCCCAAGATTTAAAGAATCATTTCCATACTATATATCT
ATACTTGATAATCGACATTAAGTAACAATAGCTATGAAACAATAATTTTTGAATCAGTAC
AATTATTAACTTCAGTTTCAGGTATGTATGTAACACATTATCATATCTAAGATGTTTCAA
GTAAAAAATAATTTAACAGTGGCATTTGACTTTTGTTTAACAATAACTGTTATAAAAATA
TAAATAATGCGTAATAAAAAAGATACTTATTAAGCACCGACATTGGTACTGCCGATGTTT
CATGATCGACAGTGCCCACTTTACGTCAGGCAGGCGTACTTGTCTGCCTCTTGGGACAAA
AATATAAAACTTGTCCATCCAAATTAGATTTTGTGTTTTACTATTTGAGTAGACTGGTCT
GTTGTTAATGAATTACCAACATCTCTATGACATCACTATGACAGTTTGCAAAATGCAAAT
ATTTTTGTTAAAATTTACTTGAACCTGACTTGAGTAATATCAAGCTAAGGAAACAAAAGT
AAAACGTGGTTGCTCCAAACTGTTTCTCTGTTCCATTCTAATTGATATGATTGATAAATT
TCTTAGATATATTTGTAGATGAAATGGGAATGATCTGTGATGGAAAATGGAAATCTTATT
GAAACATGCTAAAATCAATCGACATTGATGTCAATGTTAGCAGTTTTCAAAGAATGTCAA
TGATTTTATGTACTGTATGTACTTTGAAAAGAATGATGTACTGTGATGGTTAGAGTAAGT
GATTTCAAATATGTGTAATCTGTTTTGAAACAATTTTTCTTATAATATCTGGTGTTGGTT
AGCAGTACCTTATTAGTGGTTTAGTAACATATTAATACATATTTACATTTTAAACTTGGA
GGACCATTCATTGTGGCGGACTATAACAGACGTTTACATCCAGCAGTGGAAAAATACAGC
CTGATGATGATACTATTAAGAAAAAAATATTAATGTTGAAATTATTTTTTATCTTTGGGG
ATGGATATCTGGGCGACTACAATTTTCTCAATAGTTTCGAATTGATTGATGAGTTTGTTT
TGTATTTTTTAAGATAAAAAAATTAAGAGTGCTGAAACACATTACACTTAAAGCTATAAT
CATGAACTGAAAGTATTACCAATATTAGTGTTTTAAAATCCACATGTTGAGGGCATATAC
AAAGTGGGATTAGAAGATCGGCATGTGCTTTAATTACCATAGAAGATCGTTGAGCTCTGT
GTATTCCATTCCATTTGCCGTAATTCTTCACATATCAAACACTTCAATATTAACCCCAAA
ATTTATTGTGATATGATTTTATTTTTAATTTACTTTATAAGTTTCATATTATACTCGTAA
TTATAATTACATTACTATGTATTTGATGTGGTTATAAATAAAGGAAATTGAGA
(3413 bp)

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