SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24725_c0_seq2
Scaffold_id
NCBI non-redundant
(nr)		putative_nuclear_export_factor_CRM1_[Danaus_plexippus]
Ontology
GO:0000055 P ribosomal large subunit export from nucleus
GO:0000056 P ribosomal small subunit export from nucleus
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000776 C kinetochore
GO:0003723 F RNA binding
GO:0005215 F transporter activity
GO:0005487 F structural constituent of nuclear pore
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005642 C annulate lamellae
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0007062 P sister chromatid cohesion
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0010824 P regulation of centrosome duplication
GO:0015030 C Cajal body
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0019904 F protein domain specific binding
GO:0030529 C ribonucleoprotein complex
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0042176 P regulation of protein catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0043488 P regulation of mRNA stability
GO:0046825 P regulation of protein export from nucleus
GO:0051028 P mRNA transport
GO:0075733 P intracellular transport of virus
Transcript
Level		FPKM:7.77 TPM:7.20
ORF Entry
Sequence
(Nucleotide)
TTGATCTACTTGGGCACTGATCATGTATCCAACAGCTTCATAAAAAGTGTGAACTTGCAA
TGTTTGTAAATCACAAATTATAGTACTAATGGTGCCCAATATTTCTTCAATAAAAGGACA
GGCTTCTCCAACTTGAGTAGTGACAAAATGTCGACGGCATTTTATAGCAATTTTTATGAA
TGTATCACACGCCATGTCTTGGACACCATCATGTGTTTCATGCATGAATTCAAAAAGTTT
ATTGACAACGGTTTTTAAAAATTTCCAATGTGCACGAAGAAAGCGTGGGTATTGTCCTAC
GACATACATTATGTTACTAGCAATTATAGCTTTGTTATCTTTTCCCTTTTTCTGTTCACA
GAGCCCTAGAAGCTCTTTAATCACAATAACCAAAAATCTCTTTTCATCATCCTCAGATAG
AGCTCCAGAAATAGATCCAATTGCCCAACATAATGTGTTCAAGTTCTTCCATGACCACTC
AGTACCATTTACTTGATTTTGTAATTTCTCTGTCATAATACGTTCAGTATCTAAATAGTC
TAAATGTGTCAAGTAAACTAATGTTTCTCTCATATTTTTATACAAATTAATGGAGTCTGT
GTCCTTCATAAATTCTCTCACAACTTCACCATTTTCATTTTCAACAACTAACACCTCTTC
TGGTTTTGCCATTCTCGAGATCATAATATACCGAACACTGCTCAAGACATCAGCATACAA
AGCTTTTCTGCCTCCACTTTTACCCAAATGGTACAAGTTTGACGAACATGGCGCAATTTT
GTACAAATCAGCAGCAAGAGCATTCCAATATTCAAGACAAATTTTGAAAATTTCTACATC
TTCTACCTCTGATATTAAGACAAGATACCTCAAACCATTCATTAAAGTGTTTGTTAATCC
ACTCTTTTCTATGAGCGGACCATGCTCTTTTAGATATGTGCATAAGAAAAGTGCAAGATT
TTGAATAAAAACTTGTTCCTGATCTCGACCAGCTACATATGCTTCACGTATGTTTGTAGT
TAGAGGAAGCATAACTTCAAGTTGTTCCATAGTTTGTACAAACAAATAAACAAACTGCTG
ATCATAATTGCTGACTGTGACACCGGCAATTTCAGTAAGACAGCTCAATGTTACATTCCT
AAACATCGGCACATTCAGAAACTTAAATATCAATGTGCTTATCAATTTCATTTCGAAAAT
ATAACCAAGTGGAATCCAATTTAAAAATCTCAAAAGAGTGTCTAAGGTCACTCCAACTAA
AGGTGCATTTTGTGAATTTTCCAAGACAAATTGGCATAGCTGAAAGATTTGACTGAATTC
TGAACACATTGTATCTTTTAGATGCTTAGCTTTTGTTTGTGTGAGCTGGCCTGTACTAAA
CATAAATACTTCTTCACTCAACAACTTGAATATTTCCATATTGTTTTGACAGAGACTTTC
ATTCGTCTTTGAGGCACCCACAATGTCACTGATAAAAGTTTCCCAATTATGGGGCCATTC
TCTTTTCAGAACTTGAATAAGGATCATGTTTAGTTTTTTCAAATAAACTTTGTTGCTTTC
CATCGTAACAGGATCTGATGAATTTTTAATGATAAGGCCAACTATATATTTTTTTATACC
CTCACACTGATTTCTTGGTAATATTTTCCATCTCGTTAGTATTACTTGTTCTAATATTTG
TAATGCATAATATTTAGTTTCTTGATTTTGAGAATATTCAAGTATTGTATCAACACGAGT
CCAAGCATCAGGATGTTCCTTCAAAGCAGTCAGTATATCCTGAGCAACACGTTGTTGATC
CCCAACAGCAGAATATAAACAGCCAACAATGTTGTCCAATAAATTGATGTCCAATTTTTG
ATTGAAATCCAAAAGTTTAGATGCCTGTTGTTCTAAGGTTGCCATTCTGGTAAAATATAT
TTATTTAGTTAATTTGTTCCCTTTTTTCCAAAATCAAAATTATTTTGATTAATCCACATT
CATTCCTCACCTTATACAACACCGAGAAAATAATTTGCGGCGCAATCAATCTAACGCACT
ACCATACATACTAATCCGTTGTTTTCATGAAGCTTGAAAAAGC
(2083 bp)

- SilkBase 1999-2023 -