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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24712_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		KDM4_[Bombyx_mori]
Ontology
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0032454 F histone H3-methyl-lysine-9 demethylase activity
GO:0033169 P histone H3-K9 demethylation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0051864 F histone H3-methyl-lysine-36 demethylase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070544 P histone H3-K36 demethylation
Transcript
Level		FPKM:6.95 TPM:6.43
ORF Entry
Sequence
(Nucleotide)
AGAATGATATAATTAGTATTATCTGTGTACAATGTTTTCAAGAGAAATAGGGAGTGCCAA
AAAAAAATTTTTAATACACAAATTAAAATGTCTCAACAAATTTATTTTTATTTATTTACT
CACACTGCACTCTGCGCATCACATTATATTTAAATTTACATTATTCTTTACTTATTGATA
AATAAATCTATATTATTAAGGATTATTGTGAAAACCGTACCAAGGCGACTGGTATGGGCT
TCTGTAGTATTGGTTTGAGTTCATTTGCCCGTACATCGTTTGAACTCCATGTAGCATCGG
CTGATAATAGTCTTGTCTCCACACACTCCTGTCCACAGGGGGTTGTGGTCTTTCCCCATA
CGTCCTATAGTCTATGGGATTATTTACGAAAATTGAATCATTGTACTGACCAACTGGCAT
CGGAAAAGCATCTTGCTTTGGATGATCAACTTTTTGTACGACTACTTTTTCTGGTTTAAT
GTATTTTCTAGGTGTCTTTCTGTGTGGTTCTGGATGTAATGGCAAAGAAGACTGAGAGTT
CATGAATTTGTGGAACTCGTCCACAAAAGCACTCGGGTTTTTGTTAAGCGGCATTATTTT
CGGTACACGAGGTACGTCTGGAATTGTTGGGTTTAAGATTGGATTGGGCTGTTTTGTAGT
TGCCGTGATCGGTTTCAATAAAGATTTACTACTACTAGAATAGGTGTGGATTGGATATGG
ACTAGGAACCGAATTACAGGTGGACGACGCAATCTTTAAACCAGCCTGTGGATTTAAGGT
CATTCTGTTCTTTGTCAATTTATTGTGTATTTTATTCATGATGGGTGATAAAAAGGGATG
TCCAGTATTATCAACTTTCTTCGGAGTACGGGGTTTCCGTGGTTTCTTCTCTTTGACATC
ACCCGGTTTTATATTGTTAGCACTGACAAGTGACGGATCTTTCTTTACTTTTTCTTTTTT
AGGTTTCTCATGAACACCACCATCTTTGATAGATTTTTCCTTTTTTCTTTTCTTCAGTAC
CTTGTTATCTACTATTGCTGGTGTTGTCGAATGACTTGCGGTGGGTTCAGTAGTTAAAGG
ATCTGGTGGTATTGTATTCATTTTGACATCAATCTCGTGAGGTGGGGACTCCCAGTTAGA
CAACACAGCATTCATGTTTTCCAATTGCTCTTCAGATAGTTTTTTCGTTTTAATTTTCTT
TCCACGTGCTTTGACCGGTTTTTTGTCATCTGGGCTTTCAGATTTTCCTTCCTCGTCCTT
TTTAGCTTTGTTCTTTTCTTTCTTTATATTCCTCTTTTTCCTGCCTTTAGTGCCTTTACG
AGCACTTTTTGTGACACCATAATCTGAATCCCGATCAGAATCTATATAGCCTGTGTCCGG
TAATCTAGCTTCTGACGGATCCATCTCATCCCCTTTCAGCCATATATCTTCTAAAACATC
GAGCTGTGTATCATCAGGTTGCATAGGCAAATTTGGGCGCTTCATCGAAGTCATCATGTC
CAAATCCCCTTCAGCCATTGTCATTTCATCATCATCCATTACATCGTGACCCAGAATCGA
CACTGCTATAGCACCTTCAGAAATGCTCTTGCTAGCCATTGCTCTCTTTAAATGAAGGGG
GTGGCGTTTTTTCTTCTTAATACCTTCAATTTCTGCTTCAATAAATGATTCAGGTAGCTC
AGTGTTATTCTTGTTGCAGAGTATGTCTTGCCCTGATGGGTGGGGAGCTGGCACCATCTT
TTCCGGCTGTTCCGGGTGACAACCGATATCTTGACCTTTCAACCAGAGCTCATATCTGTC
GGGCTGGAATCGTTTGACAAAGGTGTCCATGGATATTTTCACCATGTCATTACTACAAGT
GCATTGCATGGCACGTTTTCCATATTCCACCCATCGAGGAGCAGCAAAGTTTGTAGATTC
CGCACAATTAAAACCATGATTGAATCCTGCATGATAACCATAGGGAAATGTGATCATAAT
TTCACCGGCCTCCTGAGTTATCTTATTCACTGGTACAGAGTACTGCTTTAGAATTTGTGG
TGAGATTAATGTCATTTTATGTCGCAAGAATGCCTGGCAAGTCTTGGCTGACGTTGGGAA
GAACCCTGCAGCTATTCTTTCAAAACGCTTCCCGTGTTCAGGGGGAATAGCATACCAAGT
TTTAGGTTCACCAAAATGCAAGTAATTTATAGAGTAAAGGTCCATGTCTTCAGTATGCCA
TGCAAATGTAGTTTTCCACATGCCAAAATACAGGTATGCTGTGTTCACGCCATCAATTTC
AATACCATAGTCAGAGTTGACAAAGTCTAAAATTGTCCCTAAGCTATTAATGTTCCATTC
TGTGACATCTGGATCTGTGATGCTGCCATTTACATCGGCACCATAAATAGGGGCTACATA
AGTCACATTTTTCCAGTACTTCCTCTCCAGGTCGTCAAAGCTGGAGTGACGAGGGGTGCA
GTACTTGGCTGAGTTAGCCATCACCGCGAATTGTTTCACAGTCATAGATTTCTTCTGAAT
ATTAATTTGTTGGAACAAACCTTGTTTACCGGTGACCACTTGACATATAGGTGCCGGTAT
CGTCACATTGAGCGCATCCAAGTCGTAGCCAGACCTTCGTGGGACCCATTCCGGTGGTGG
GATGACCTTGGCCAGGCCTGCTTTATGAGCACCCTTCGATTCCATGTGCTGTATGTATTT
ATTGAAATCCTTAAACTCGTCCCACGTAGGGCGGAAGACTTGGATCGCCAAGCCTCCCGC
GCCGACACCTGCATCGTCTCCATGTACCGACATTGTCTTTTTCAAGTCACAAACACTTTT
CAGTCACCCGAATTTCACCACGATTTCAGATTAAATACGGGATTCCAACTTATAAGCACT
TTTTTTTCAGAAAGCACATTATTAAACGTTTTCGTTTTATTTATTCAGTTCGATAATCTA
TTTAAATAACACTAAATAATCTTTCATAATTAGGCGAAAACATTATCAGTAAAATGGCTG
CCGATTGTTACCTATGCG
(3018 bp)

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