SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24668_c0_seq4
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_2-like_[Papilio_xuthus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005737 C cytoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048511 P rhythmic process
Transcript
Level		FPKM:0.41 TPM:0.38
ORF Entry
Sequence
(Nucleotide)
AACAATTAACAATTTGCGTATTTAAATATATAGATATATGTATATTATTTATATAATGTG
TATTATTTTATAAAAGCTTTTTTTTAAATAATATTATTAATATTAATTTATTTATTTACA
AAATGACTAAAATTGATAGGAATTTCAAATGTAAATAATATAATTGCAGTGTCACTGTGT
GTTCATTTACAATCATTGACGGGATAAGGCTTCATATTTTTGGTGTGTAATGCTATAAAA
CGAAAAAAAAAAAATACTTTTGCGGTCAAACTTTAAGACAAGCGAGAAGGACACTTGACG
GTTCAGATCAGTCGCCCGCGGACAACAACAGCGCACGTTGATATTCGGGCTTATAAATTA
CAAGAGTGAACGCGGAGAGCGAGCAATGGAGTGCTAATTTCATTCCCAACTAAAAACGCA
ATGTAAATGCGCAATGCAAATAATAAAATAAAATCACTAATCTTACTATTACCTTGGTTA
AATGTAAATGAATATTATTTTCGTCTGAAGCACAACGGGACCGTACATTGAATTCTTGTT
TATAATTACTAAGTCATAACCGTCAGATAGAAAATGTAAGTTATACTAAAGGATTATTCT
AAGCGAGTTACTCTTCGAATTTATAAGCCCCGTCAAAAGCGCTACTGAGCTTCCAAACGA
AACTACCAGCTGACTTAGTTAACATGAGCTCTCCGAAAACGGGGTCGCGGATTCGAGTTT
TATTAAAAAAAAAAAAATTGTAGCGTTCGAAACATAAAAAATGTGTCTCCAAAAGGAGGA
CTAAAAGAATTTTCCGTTCAACATTGTCGTCCGTACTCTGGTTGAGTCGGAACTCGAATC
CGCGACCCCTTGACGCCATCGCATGATCGAACGCCACACCCACCACTATTTACCCGACAT
TCTACTGGACGATTCATTTTCAACAACAAAATAATTTATTCGTTTTATAGAAAAAAAAAC
TCCACTCACAAAAAAGTACCGTCAGCAAAACAAAAAATTATAAAAAAAAAACATTTATCA
AGTGTCACGACCCCCTTGCCCGTCGTCCAGCGTGACGCGTGTCACTGTCAACTGTCACTG
GCGCGCGGGGCCAGCGAGCGGGCGGGCTTTGAGCTTTCGCTACGTACGTGAAAGCTCATA
GAAGAGCACGTAGGCCTCCGACGAAACCACGTTGGACGGGTTGATGGGCGTTACCCTAGA
GTCATTGTACTCGTGCCAGTCGCCGGTGTGCGGGTGCTTGCAGTACGCCGTGTAGTGGCC
GGAGTACGTTGTACCGGAGTGGTTGCTGACGGCGTACAGGTTGTAGACGGGCGCGCCGGA
CCGCGCGGCGGCGTAGGGCGACATGTCGAGGCCGCTCAGGGGGAACTCCACCACCACGCT
CAGCTTGCCGCGGAACCGCTCCGTCGGGGAGAACCTTTTGAGATGCAAGACCAGCACTTG
AGGGAACTTCTGCACCGTGAACCATTTGAGGCACTTCCGTCTCACGCCGCACTTCGAGCA
TGTCGGTTTCTCGTCACCGTCCAGCTCTTCCTCGCGCACGAAGTGCTGTAGGCACTGCTG
CAGCTTCAGGTTGCCGGTCCGGGCCGGAATCGGCAAGCTCAGGTCCCAGAAGGGATCGAA
GGTGACGCTGTCGTGGTTGCAGTGGGTGCAGCGTAGGGTCGACTTCAGCTGCCCCACGAA
GATGTCGCCCACGCGGCTGTCCTCCATCCTCAGGTAGCGGCTCCAGGCTTCGGCTGCCTT
CGCTGAATCGCTTAGATTGTCGTCGATCTCCGTCAATATAGGCTTCGGTTTGACTGTGAC
CCTGTTCACGTCCTCGTGGAGCCCTTCCAGTAGATAACGAAGAAACTCCTGCGCGTCCTG
CTGGCTATAGCCCATGAAGCGCGGCGCGAACTTCTGAACCTGGGACTTCAGGGCGGTGGT
GTTCACGACCCCGTCGCGCTCACCACTACGCCACACCTCCTTGATGACCGTCGCGAAGGC
TTTGATGAGGGCCCCCTTCATGCAGGACAGCGAAGTGTTGATGTCATCGCAATACTTGTC
TTCGGAGACGTATTCCAGCAGCGGCTTGGTGTTCGATAGGCACTGGAGGACGCTATTCAT
GAAACACGTGTTGCCGATGTTCCTGAGGCCGTTCAGACCACTGGTGTGACTTGACTGCCG
CTCATTCCTGGACTCGGAGAGTGATTCCGATCGATCGGTGCTCCGGCGCAGGCCGCTAGG
ACCGCTTTTGCCTCCGGCCAATTCCAAAACTATTTGCAGCAGGAATATGACCATAACTTT
CGCACGCGTCCATACACTGAAGTATATGGGTAGGAACAAAACTGATTGGTACATGACCAC
ACGTCTTGTTACTAGCAAAAATTCAAACAGTTTTCACGTCAACAAGTAAATGTACGCATC
AATTTTGAACTTTCTGTATTGGCGCAGAGGGTCTTTTGTTCTGTATAACGTATTTTAGTT
TACTCAGTTGCGTTTTATCATGTTTCAGAATACTAGTCGTTTTCTGGAGAGCTGGACAAA
ATTCGCGTTACGTAAACGAGTTTTTCTCATCATCCAGACACGTCTG
(2566 bp)

- SilkBase 1999-2023 -