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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24647_c0_seq3
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX8-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0016787 F hydrolase activity
GO:0042802 F identical protein binding
GO:0044822 F RNA binding
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:2.96 TPM:2.74
ORF Entry
Sequence
(Nucleotide)
CCTAAATGTGAGTTTCGTGTGACTTTGTTCATACGTTAGAATTTGTTAGATTTGATGGTT
TTAAAGTGAAGCTAATACTTAAAATGGACGAAGTCGCTAAATTAGAGCATCTTTCGCTCG
TGTCTAAAATATGCACCGAGCTAGACAACCATTTAGGTTTGAACGACAAGGATTTAGCGG
AATTCATCATAGATTTGGCTGATAAGAATCCAACATTTGAAACTTTTAAAGTAGCATTGG
TTGAAAATGGGGCTGAATTTTCTGATTCCTTCATGACAAATCTACTCCGTATAATACAGC
ACATGAAACCTGTGAATACATCAACATTGATTAAAAATATTGCCGAAACTGAAAGTGAAA
ATCCTCTGGCAAAAAAGTTTCCTGGCTTGGCCATACCAAATGATAAACCTCAATCTTTTT
CTGATGAAAGTAGTGATGATGAAAAAGACAAAAAGAGAATAACAGCCAAAGACTTATTTA
CAGAAGAAATTAAACCAAGTTCTACTGATAATGTTGTTGATTTGGCGATGGCTGAATTGG
AAGCTTTAGCACCTTCCCATTCTACAACAAATGAACTTCCTATAGGAAAAGAACCCCTAA
AAATTGAGAGTAGTAGAAATAGTGATCACAAAGAAAAGAATAAATCAGAAGAATCTAGAG
ATAAAGAGAGTAGGAGTCGAAATCCTAAAAGAAGCAGAAGTAGGGAACGTAAAAGAAGCA
GAAGTACACAGAACACAGATAAATATAAACTAGAAGAATCTCGAGACAGAAAACGGCGTA
GTAGAAGTCGAGATCGTAAAAGAAGTAGGAGTCGAGATAGAAAAAGAAGTAGGAGCCGAG
ATCGTAGAAGAAGTAGGAGTAGAGATTATAAAAGAAGTAGAAGTAGGGAACGTAAAAGAA
GTAGAAGTAAAGGTAAGAGTAGTCGTAGCCGGGATAGGAGAAGCAAAAGTCAAGACAGAG
ACCATAGAAGAAGATCACACAGTCGACATCGTCACAGATCCAGGTCTAGGGACAGGCGTA
GATCTTACTCAAAAAGTAGAAGATCAGTATCAGGTGGCAGAAGATCTCGTTCAAGAAATA
GAGAAGAAAAATTTGATTATGGCAAGAAAAGCAGAAAACGCAGCCCTGAAGTAGAATTGA
ACGATGATCCTGAACCAGGAAAAATATACAGTGGCCGCGTTGCAAACATTGTACCATTCG
GCTGTTTTGTTCAAATTGAAGGAGTCAGAAAAAGGTGGGAAGGATTGGTGCATATCTCAC
AGCTGCGAGCTGAGGGTCGTGTCACCAATGTATCTGATGTTGTCAATAGAGGTGATAAAG
TTAAGGTCAAAGTAATCTCAATAACAGGACAGAAAGTTTCTCTCACAATGAAGGATGTTT
GTCAAGAGACCGGGAAGGATCTCAATCCAGCATCCCATGCTCACCTGGAAGCAGAACGTG
AAGGCCGAAACCCTGATCGCCCTCCACCAGCAGCAACTGTGTTAGCC
(1487 bp)

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