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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomaMG_comp24646_c0_seq1
Scaffold_id
NCBI non-redundant
(nr)		PREDICTED:_plasma_membrane_calcium-transporting_ATPase_2_isoform_X2_[Papilio_polytes]
Ontology
GO:0000166 F nucleotide binding
GO:0000902 P cell morphogenesis
GO:0005388 F P-type calcium transporter activity
GO:0005509 F calcium ion binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0005929 C cilium
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006816 P calcium ion transport
GO:0006874 P cellular calcium ion homeostasis
GO:0006996 P organelle organization
GO:0007595 P lactation
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0008022 F protein C-terminus binding
GO:0008361 P regulation of cell size
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0016787 F hydrolase activity
GO:0021549 P cerebellum development
GO:0021692 P cerebellar Purkinje cell layer morphogenesis
GO:0021702 P cerebellar Purkinje cell differentiation
GO:0021707 P cerebellar granule cell differentiation
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0030182 P neuron differentiation
GO:0030899 F calcium-dependent ATPase activity
GO:0040011 P locomotion
GO:0042428 P serotonin metabolic process
GO:0042472 P inner ear morphogenesis
GO:0043025 C neuronal cell body
GO:0045202 C synapse
GO:0045299 P otolith mineralization
GO:0046068 P cGMP metabolic process
GO:0046872 F metal ion binding
GO:0048167 P regulation of synaptic plasticity
GO:0048839 P inner ear development
GO:0050808 P synapse organization
GO:0050885 P neuromuscular process controlling balance
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0051928 P positive regulation of calcium ion transport
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060113 P inner ear receptor cell differentiation
GO:0070062 C extracellular exosome
GO:0070588 P calcium ion transmembrane transport
GO:0090102 P cochlea development
Transcript
Level		FPKM:51.86 TPM:48.02
ORF Entry
Sequence
(Nucleotide)
TTTTTTTTTTAAAAACAATAAAATAGATTTCATTTATTGTGAGACGAAAAATACAACAAT
GGGACTTATCACCTAAAATGGTTAGTGGCAGACTGTTGTGTCAAAAACAATTGATTGTTA
GACTGAAGCGACGCGCGGCTAGTTGTGCCGGCGACACTACGCTGGCACGTTAACGACTCC
TAATTATTTATGTCTTTCATCGGGAAACTCGTGAAACGAATATCAACGAAATTATACATA
TATATAATATATATTTATATAAATAGTTTATTATACACAAAACGATACCATGACCTCTAT
TCACTGAAATCATAACTATATTTTTATATTTATTTAAATATGTGAAGTTTTCAATAGTTT
CATTTTTAAACTAAGTTTTTTTTAAAAAGGCTTTATTGATTCGAAGCTAATACTTAATTA
CTTACAAGATTGTTTAATAGTTATAGTAGAGCACGCGACCGCCGCGGCCGCCGTCGCGGT
CGGTGCGGCCGCGGCGGTCGCCCAAATAAAACGTAACAACTCTCAAATATCGCTACTATG
AAACGTTCTATACAAAATTGAACATTGCCGATTCGCTATAATCGTTTTGATTTAGTCTAA
CGCGCGAGCGGCCGACTCGGCGTCCCACGCGATCATGAAATGCCAGTGCGATGCTAACTC
GCCTACAGTAGCGGCGGCACCGGCCGTCCCGTACCGACCCTCACGAAAATATCCACACCG
TACACTACCTATGTACTCTTCAACAAACTTCAAGTATTTATGATCAACGATTACATTACG
ATTACTGAATAATTATTTGTTTGACAAGAGACTAGCGTCAGTTGCGGTCGGCGGTGCGGC
GGCGGCCCGACCGCACGCGGTACGTACACGCAGTGGGGGAAACCAACAAAACGTTACTCG
GAACAAACACCTTAACTAATACACTTTAATAATTTAGTCGAATGTTGCGAGCGGAGAGCG
CGCCCGACGCACGAGCGGCAGCGGGAGCGGGAGCGGACGCGCTCTCCGCTTCTGATCGGG
CGCTCATCTTTCACAAAAGCAATATAAAACATTTCATTCCGTGTGAAAGGCGACACGATG
GTTTGCGACGATTTATACGTTTTTAATTTTATTAAGTATATCATTATTTTTTTTGCAAAA
CACAAGTCCGTTCGCTCACCCCTGCGCTTAAATCTAAAAATTAATAATTAGACAATACAT
TTTATTCGTTCAACAGACGCGCGACGCGACCGACGCGCGTATAATAATAAAATATTTCAA
AACAATCGAACGATTACAATAAACACACTAGTCAACAACGGGAGGTCAGGGCTCGCGGCG
TGGGTCGGTCGCGTAATACTGATATGGTGCAGGCGCGTTACACCGCGGTCTCGGTGTGGC
TGTGGCTGGACAGGCGCTCCACGTCCAGGTCGTGCGGCGCCAGCGCGTGCTCGGCCTCCG
CCCCCGAGGACTGCGAGTACCGCTTCGAGAGCGCCGTCTGCTTCCGGAGCGCCTCCGCCA
GCGCCGCGTCCGCCAGCGAGCCGCGCGAGTCCAGCCCCTGCCGGAACGCGTTCACCACGC
GGATAGCTTGATCTGTGGATGTCTTGCTGTAGGGGACCGGTATCAACCGTTCTTGTAACT
CGCCACCTATCACCTGCGTCTGTAGGCGCGTGAGTCCGCGGATCCAGAGGATCTGTCCGG
CGCGCGGCTTCTTGTCGAGCTCGTTGTCGTAGTCCGGCGCGGGGGCGCACTCCTGGCCGG
CCTGCCCGCGACCCCACGAGAGGGTCTTGGGTATTTTCCTAGTGGGTAGCGTGGTGACGA
GCTGGCCCCAAACCAAGGTCCCCGCTCCGAAGAACAAGCACCACAGCCACTGATCTATCG
TGAGTCCCGCCGTGCTGAACGCCATGCCGCCGAACTGGATGATGACCACCTGCGACAGCG
CAGTCCCGACCCAGATGGAGTAGAAGATGGGGTTGGTGAAGAGTCCCTCGAACACGTTCC
GCTGGCCGTGGATCTTCCTGGCGTTGATCTCGTTGAACAGGGTCATCATCACGAACGTGT
TGAAGATGATGGTGAAGTGCTGCGTCGGCTCCGAGCCCAGCGGCTGGTACCGGCCCGACG
GGATGTTCAGCATCTTGTCGCCGACAAACAACAGCATGAATATGATGAAGAGCTGATAGA
TGGCCTGTCCGAGGATGTTCTTCATCATGGTGCGCGAGATGAGGGGCTTGGTCCGTCCGT
ACGGCTTCCGCTGCAGCAGGTCCGGGGTCGGCATCTCCGTGGCCAGCGCCAGGGACGCCA
GCGTGTCCATGATCAGGTTCACCCACAGCATCTGGACCGCCTTGAGCGGGCTGTCCTGGA
TGGCGCAGGCTCCGATGAAGGCCACGATGACGGCCACCACGTTGACGGTGAGCTGGAACT
GCAGGAACTTGGCGATGGAGTCGTACACGTTGCGGCCCCACATCACCGCCTTCACGATCG
ACGAGAAGTTGTCGTCCGTCAGGATGATGTCGGACGCCTCCTTAGCCACGTCCGTGCCGG
CGATGCCCATGGCGAATCCGACGTCGGCCTTCTTGAGCGCGGGTCCGTCGTTGGTCCCGT
CCCCGGTGACGGCCACCACCTCGCGCGTGTCGAAGGCCTTGGACTCGATCATGCCCTTCA
CGAGCGTGTACTTGTCCGTGGGCGACGAGCGCGCCAGCACGCGCAGGCTGGGCCACACCT
TGTCCACCAGCTGCTGCTGCACCTCTCCGTTGGCGTCCCGAATGCGTCGGTTGAACTCCT
TCCCCTCGAGCACCAGGAAGTCGTCCGTGGGCCTGAGGATGCCGCACTTCATGGCGATGG
AGCGCGCGGTGTTCACGTTGTCTCCCGTCACCATGCGCACCGTGATGCCGGCCTTCTGAC
ACTTGCGGATGGCCTCTGGAACCTCGGGCCTCACGGGGTCCTCGATCCCTACAACGCAGA
GGCAGGTCAGGTTGTTCACGATGTTGTCCTCGTCGTCCCAGTGCGGCTCCTGGTCCACGT
GCACCTGGTTGATGTCCGCCTTCCCGGGCACGAAGTCCCGGTAGGCCACGGAGATGGTCC
GCAGCCCGTCGCAGGCCATGGGCTCGATGACCTGGCGCACGAGCCGCTCCTGCATGTCGC
GCGTGAACTTCTCCAGGCGGCCCTCGTGCCCGTAGATGAAGGCGCACTTTTTAAGCACGA
TCTCCGAAGCTCCCTTAGTGTAGAGCCTGTAGCCGCCGTTGTGCGGTATGACGGTGGACA
TGCTCTTCCGCACCGAGTTGAAGGTGTACACCCTGGTGAACGACTCTTCGGGATGACTTT
CTCTGACGGCTTCGTAGCTCTGCCCTAGAGCCAGGACGAATCCGAGGAGGGCGCATTCAG
TTTTGTTACCGACTTGCATGGATGGCATCGTTGGATCTTGTGATGGCATGATCCTGGAGG
TGAAGGCGGAGTTGAGCGCCACGCCCTGCACGATGAGGTCGGCGACGGGCGGCGGGATGT
CGCGGTAGTTGGGCGTCACCTTGCACAGCTTCTCGCAGATGTACGACTGCACGACCGTCA
TGCGGTTGGTGGTCAGCGTGCCGGTCTTGTCCGAGCAGATGGCGGTGGCGTTGCCCATGG
TCTCGCAGGCGTCCAGGTGGCGCACCAGATTGTTGTCTTTCATCATTTTCTTTACGGAAT
AAGCAAGCGAGAGTGTGACAGCGAGCGGCAGCCCCTCGGGCACGGCGACGACCAGCACCG
TCACACCGATGATGAGGTGCTTCACCAGGTTGTTGATGTAGGTTGCCTTCCACGGCTTGC
CCTCTATGGCGAACGTCCGGACGCAGAACTGTATGACCAGTATTATGACCGTGAGGACGG
CGATCGTCGAGCCGGCGTAACCGATCTGTATAGCGAGCTTGGTAAGTTTGGCCTGCAGCA
CGGACTTCTCCTTCTTGTGTTGCGGCTCTGGCGGCGGCTTGTCGGCGGCGGGCGGCGCGT
GGTTGTCGTCGGGCGGCGCGTGGTTGGCGCCCACGCCCCCCACTCCCTCCTCCTCACCTT
TCTTCTTCTGTTTAATTTCCTTCTCCTGCTTGTCGACAGCGGCACCGAGCAGCGTGAAGA
TGATGCCGGCCTGGGAGTTCACCCCCACGGCTGTCACTAACATCTTGCCGGAACCTTCCA
TAACGTGTGTACCGGATAGCACCATGGGATCAAATGTTTCACCCTTCTTGACATGGTCCG
ATTCTCCCGTCAGGGATGACTCGTCAATCTTAAGATCGTTGCTCTGCAGCAGGATACCGT
CAGCCGGAAGCAGATCTCCGTATTTGATCTGACATATGTCGCCGACGACGATCTCGCTGA
TGGGCACCTGTTTGACCTCCGTGCCGCGGATCACGGCGAACTTGTGCTCGCCTTCTATCC
GAGACTGCAGACCTCTGAATTGCCTTTCTTTCGTGTAATCATTAAACGCTGTTACTATGA
CGACGACTATAACCGATATTAAGATGGCCAGACCCTCGATCCACTGGTAGTGGCCCTCCT
CTTCGTCCAAATGTGCCGCATCATTGGGGTCATCTGCGGGCTTGTAAAAACTCAATCCTA
ATGAAACAACAGCAGCAACTTCTAGGATAATAAGGGTGACATCCTGCAGAGCCTCCCATA
CTAGCGTCAGGAAAGTCTTGGGTGGCTTCGGCGGGATCAAGTTTGAACCGAACACTTCCC
GCCGATGCTGCAGGTCAGCCTTCGAACCGCTAAGACCGTCTGTGGGAGATGTGTAGAGTT
TCTTGCATAATTCTTGCGGTCCACCGAGCGCGTTGATTTTGGCCATGCCCTCGGCGCCGC
GCGTCTCCATCAGCTCGCGCAGCTGCCGAAGGGAGACGCCATATTGCGCCGGCCTTCCCT
CCACGGTGGCCATGGTGCCGGGCCCGCGGCCGCCGCCCGCACCAAGCCCGACAACCCTCT
AGATCACGAGTGCGTGTCGCACCCGTTTTTCCGCCTCGGCGTATGGCTCCCTATTATGCT
GCAGGTTACGACCTTAGTCGTGTTTGGCAGCTGTGGAATACCTCCGAAAACGAACAAAAG
AGAAAAACCACAAAAACTTAAGCAACACAGCTAAGTACACGAGCCCGTTCTGCCACTTCA
CAGCCGACGTCAAAGGAATTCACAGAAATACTAGTCGAACACTTGAAATAAATAGAAAAT
ACACAGATTGCACTAACTTAAACCTATGATTTTCTCGTTAATTATTTCTAATAAACCTAA
ATGAAAAACGCGCCAAATGTCAAACTTAAAATACTACGAGCACCAACTCATCACGCGACC
ACACGTACCGTGTCCGCTTTCTGACTGACAAGAGTAGTGGCGAGACGACGAGGGCAGCAC
ACGCGATCGCGCACGATAGCTATGCGAGCCATGCACTACGCGACTTTCGTTTAATCGCTA
TGGC
(5404 bp)

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